KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:22 2014 Check: 00 .. Name: ENSP00000354612/1-599 Len: 600 Check: 7994 Weight: 1.00 Name: ENSBTAP00000008833/1-600 Len: 600 Check: 7517 Weight: 1.00 Name: ENSTTRP00000006750/1-600 Len: 600 Check: 1163 Weight: 1.00 Name: bmy_04593T0/1-600 Len: 600 Check: 2751 Weight: 1.00 Name: BACU007278/1-570 Len: 600 Check: 9595 Weight: 1.00 // 1 50 ENSP00000354612/1-599 -MSRSLLLWF LLFLLLLPPL PVLLADPGAP TPVNPCCYYP CQHQGICVRF ENSBTAP00000008833/1-600 MSRQGISLRF PLLLLLLSPS PVLPADPGAP APVNPCCYYP CQHQGICVRF ENSTTRP00000006750/1-600 MSRRSVSLRF PLLLLLLPPS PVLPATPGAP APVNPCCYYP CQHQGICVRF bmy_04593T0/1-600 MSRRSVLLRF SLLLLLLPPS PVLPADPGAP APVNPCCYYP CQHQGICVRF BACU007278/1-570 ---------- ---------- ---------- MSLNPCCYYP CQHQGICVRF 51 100 ENSP00000354612/1-599 GLDRYQCDCT RTGYSGPNCT IPGLWTWLRN SLRPSPSFTH FLLTHGRWFW ENSBTAP00000008833/1-600 GLDRYQCDCT RTGYYGPNCT IPEIWTWLRT TLRPSPSFVH FLLTHGRWLW ENSTTRP00000006750/1-600 GFDRYQCDCT RTGYSGPNCT IPELWTWLRT TLRPSPSFLH FLLTHGRWFW bmy_04593T0/1-600 GLDRYQCDCT RTGYSGPNCT IPELWTWLRT TLRPSPSFLH FLLTHGRWFW BACU007278/1-570 GLDRYQCDCT RTGYSGPNCT IPELWTWLRT TLRPSPSFLH FLLPHGRWFW 101 150 ENSP00000354612/1-599 EFVNATFIRE MLMRLVLTVR SNLIPSPPTY NSAHDYISWE SFSNVSYYTR ENSBTAP00000008833/1-600 DFVNATFIRD KLMRLVLTVR SNLIPSPPTY NVAHDYISWE SFSNVSYYTR ENSTTRP00000006750/1-600 EFVNATYIRD MLMRLILIAR SNLIPSPPTY NAAHDYISWE SFSNVSYYTR bmy_04593T0/1-600 ELXNATYIRD MLMRLVLTAR SNLIPSPPTY NVAHDYISWE SFSNVSYYTR BACU007278/1-570 ELVNATYIRD MLMRLVLTAR SNLIPSPPTY NVAHDYISWE SFSNVSYYTR 151 200 ENSP00000354612/1-599 ILPSVPKDCP TPMGTKGKKQ LPDAQLLARR FLLRRKFIPD PQGTNLMFAF ENSBTAP00000008833/1-600 ILPSVPRDCP TPMGTKGKKQ LPDAEFLSRR FLLRRKFIPD PQGTNLMFAF ENSTTRP00000006750/1-600 VLPSVPQDCP TPMGTKGKKQ LPDAELLSRH FLLRRKFIPD PQGSNLMFAF bmy_04593T0/1-600 VLPSVPRDCP TPMGTKGKKQ LPDAELLSRR FLLRRKFIPD PQGSNLMFAF BACU007278/1-570 VLPSVPRDCP MPMGTKGKKQ LPDAELLSRR FLLRRKFIPD PQGSNLMFAF 201 250 ENSP00000354612/1-599 FAQHFTHQFF KTSGKMGPGF TKALGHGVDL GHIYGDNLER QYQLRLFKDG ENSBTAP00000008833/1-600 FAQHFTHQFF KTSGKMGPGF TKALGHGVDL GHIYGDNLER QYQLRLFKDG ENSTTRP00000006750/1-600 FAQHFTHQFF KTSGKMGPGF TKALGHGVDL GHIYGDNLER QYHLRLFKDG bmy_04593T0/1-600 FAQHFTHQFF KTSGKMGPGF TKALGHGVDL GHIYGDNLER QYHLRLFKDG BACU007278/1-570 FAQHFTHQFF KTSGKMGPGF TKALGHGVDL GHIYGDNLER QYHLRLFKDG 251 300 ENSP00000354612/1-599 KLKYQVLDGE MYPPSVEEAP VLMHYPRGIP PQSQMAVGQE VFGLLPGLML ENSBTAP00000008833/1-600 KLKYQMLNGE VYPPSVEEAP VLMHYPRGIP PQSQMAVGQE VFGLLPGLMV ENSTTRP00000006750/1-600 KLKYQVLDGE MYPPSVEEAP VLMHYPRGIP PQSQMAVGQE VFGLLPGLML bmy_04593T0/1-600 KLKYQVLDGE MYPPSVEEAP VLMRYPQGIP PQSQMAVGQE VFGLLPGLML BACU007278/1-570 KLKYQVLDGE MYPPSVEEAP VLMRYPQGIP PQSQMAVGQE VFGLLPGLML 301 350 ENSP00000354612/1-599 YATLWLREHN RVCDLLKAEH PTWGDEQLFQ TTRLILIGET IKIVIEEYVQ ENSBTAP00000008833/1-600 YATIWLREHN RVCDLLKAEH PTWGDEQLFQ TARLILIGET IKIVIEEYVQ ENSTTRP00000006750/1-600 YATLWLREHN RVCDLLKAEH PTWGDEQLFQ TARLILIGET IKIVIEEYVQ bmy_04593T0/1-600 YATLWLREHN RVCDLLKAEH PTWGDEQLFQ TARLILMGET IKIVIEEYVQ BACU007278/1-570 YATLWLREHN RVCDLLKAEH PTWGDEQLFQ TARLILMGET IKIVIEEYVQ 351 400 ENSP00000354612/1-599 QLSGYFLQLK FDPELLFGVQ FQYRNRIAME FNHLYHWHPL MPDSFKVGSQ ENSBTAP00000008833/1-600 QLSGYFLQLK FDPELLFGAQ FQYRNRIAME FNQLYHWHPL MPDSFRVGPQ ENSTTRP00000006750/1-600 QLSGYFLQLK FDPELLLGTQ FQYRNRIAME FNHLYHWHPL MPDSFRVGPQ bmy_04593T0/1-600 QLSGYFLKLK FDPELLLGTQ FQYRNRIAME FNQLYHWHPL MPDSFRVGPQ BACU007278/1-570 QLSGYFLKLK FDPELLLGTQ FQYRNRIAME FNQLYHWHPL MPDSFRVGPQ 401 450 ENSP00000354612/1-599 EYSYEQFLFN TSMLVDYGVE ALVDAFSRQI AGRIGGGRNM DHHILHVAVD ENSBTAP00000008833/1-600 DYSYEQFLFN TSMLVDYGVE ALVDAFSRQP AGRIGGGRNI DHHILHVAVD ENSTTRP00000006750/1-600 NYSYEQFLFN TSMLVDYGVE ALVDAFSRQP AGQIGGGRNT DHHVLYVAVE bmy_04593T0/1-600 NYSYKQFLFN TSMLVDYGVE XLVDAFSRQP AGRIGGGRNI DNRVLYVAVE BACU007278/1-570 NYSYKQFLFN TSMLVDYGVE ALVDAFSRQP AGRIGGGRNT DHRVLYVAVE 451 500 ENSP00000354612/1-599 VIRESREMRL QPFNEYRKRF GMKPYTSFQE LVGEKEMAAE LEELYGDIDA ENSBTAP00000008833/1-600 VIKESRELRL QPFNEYRKRF GMKPYTSFQE LTGEKEMAAE LEELYGDIDA ENSTTRP00000006750/1-600 VIKESRELRL QPFNEYRKRF GMKPYTSFQE LTGEKEMAAD LEELYGDIDA bmy_04593T0/1-600 VIKESRELRL QPFNEYRKRF GMKPYTSFQE LTGEKEMAAE LEELYGDIDA BACU007278/1-570 VIKESRELRL QPFNEYRKRF GMKPYTSFQE LTGEKEMAAE LEELYGDIDA 501 550 ENSP00000354612/1-599 LEFYPGLLLE KCHPNSIFGE SMIEIGAPFS LKGLLGNPIC SPEYWKPSTF ENSBTAP00000008833/1-600 LEFYPGLLLE KCHPNSIFGE SMIEMGAPFS LKGLLGNPIC SPEYWKASTF ENSTTRP00000006750/1-600 LELYPGLLLE KCSPNSIFGE SMIEIGAPFS LKGLLGNPIC SPEYWKSSTF bmy_04593T0/1-600 LEFYPGLLLE KCPPNSIFGE SMIEIGAPFS LKGLLGNPIC SPEYWKSSTF BACU007278/1-570 LEFYPGLLLE KCPPNSIFGE SMIEIGAPFS LKGLLGNPIC SPEYWKSSTF 551 600 ENSP00000354612/1-599 GGEVGFNIVK TATLKKLVCL NTKTCPYVSF RVPDASQDDG PAVERPSTEL ENSBTAP00000008833/1-600 GGDVGFNLVK TATLKKLVCL NTKTCPYVSF HVPDPHREDR PGVERPPTEL ENSTTRP00000006750/1-600 GGEMGFNLVK TATLRKLVCL NTKTCPYVSF HVPDPRQEDG PGVGRPSTEL bmy_04593T0/1-600 GGEMGFNLVK TATLRKLVCL NTKTCPYVSF HVPDPRQEDG PGAERPSTEL BACU007278/1-570 GGEMGFNLVK TATLRKLVCL NTKTCPYVSF HVPDPRQEDG PGGERPSTEL