KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 16:36:22 2014 Check: 00 ..
Name: ENSBTAP00000008834/1-732 Len: 739 Check: 8214 Weight: 1.00
Name: BACU006353/1-556 Len: 739 Check: 8092 Weight: 1.00
Name: bmy_04287T0/1-459 Len: 739 Check: 389 Weight: 1.00
Name: ENSTTRP00000006858/1-670 Len: 739 Check: 6942 Weight: 1.00
//
1 50
ENSBTAP00000008834/1-732 MDNRKDPPFF NEDNVGPLYC RLPFYDTMEL FIETLTGTCF ELRVSPFEAI
BACU006353/1-556 ---------- ---------- ---------- ---------- ----------
bmy_04287T0/1-459 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000006858/1-670 ---------- ---------- ---------- ---------- ----------
51 100
ENSBTAP00000008834/1-732 ISVKAKIQRL EGIPICQQHL IWNNMELEDD YCLNYYNISD GCTLKLVLAM
BACU006353/1-556 ---------- ---------- ---------- ---------- ----------
bmy_04287T0/1-459 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000006858/1-670 ---------- --IPICQQHL IWNNMELEDD YCLNDYNISE GCTLKLVLAM
101 150
ENSBTAP00000008834/1-732 RGGPINTSRV PLEDPLKDMA EYMDSSRDEV WEKTSCNKQV TLLVYQEGDQ
BACU006353/1-556 ---------V PMEDPLREMN EYMDSSRDEV WEKTSCNKQV TFLVYREGDQ
bmy_04287T0/1-459 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000006858/1-670 RGGPINTRRV PMEDPLREMA EYMDSSRDEV WEKTSCNKQV TFLVYREGDQ
151 200
ENSBTAP00000008834/1-732 LNFFRVVDRG DGTLTPLSES LSQKIEYQVH FNSNYHFLCS SGSVYSLYAD
BACU006353/1-556 LNFFRVVDRG DGTLTPLSES LS-------- ---------- GGSVYNLHTD
bmy_04287T0/1-459 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000006858/1-670 LNFFRVVDRG DGTLTPLSES LRIGFHLHVS LRKGEHCMI- GGSVYNLHTD
201 250
ENSBTAP00000008834/1-732 EDEEIEPSPS GQQIIENSIT MNKMKLLKAK MENMNLSKKP KKAVKVKPRP
BACU006353/1-556 EDEEIEPSPS GQQIIENSIT MNKMKLLKAK MENMNLSKKP KKAVKVKPRP
bmy_04287T0/1-459 ---------- ---------- ---------- ---------P KKAVKVKPRP
ENSTTRP00000006858/1-670 EDEEIEPSPS GQQIIENSIT MNKMKLLKAK MENMNLSKKP KKPVKVKPRP
251 300
ENSBTAP00000008834/1-732 PVAPRPCSGS TAPARHRVLR ALPHIGQSCL PSPGSTRLPD LASSAVSSLA
BACU006353/1-556 PVVPRPSSSS TAAARHRLLR VLPHIGQSCL PSPGNTYLPD SASNAISSLA
bmy_04287T0/1-459 PVVPRPSSSS TAAARHRLLR VLPHIGQSCL PSPGNTYLPD SASNAISSLA
ENSTTRP00000006858/1-670 PVVPRPSSSS TGAARHRLLR VLPHIGQSCL PSSGNTYLPD SASNAISSLP
301 350
ENSBTAP00000008834/1-732 ALPAADRPVS SITSDLLKEG ENWESYALSH SSSGFRLPSQ MPHMEFETDK
BACU006353/1-556 ALPPADRSIS SIASDFLKED DNWESNTQSH SNSGFKLPPQ IPAMEFENDK
bmy_04287T0/1-459 ALPPADRSIS SIASDFLKED DNWESNTQSH SNSGFKLPPQ IPPMEFENDR
ENSTTRP00000006858/1-670 ALPPADISIS SIASDFIKED NNWESNTQSH SNSGFKLPPQ IPPMEFENDK
351 400
ENSBTAP00000008834/1-732 ELADAVLHLG SSLPRRTKHF PGSLSS-NED DAVLFPTSEE CVTEESLPPE
BACU006353/1-556 ELADSILHLG SSLPRRTKNF SGNLSSNNED DTVLFPTSEE CVTEELLLPE
bmy_04287T0/1-459 ELADSILHLG SSLPRRTKNF SGNLSSNNED DTVLFPTSEE CVTEESLLPE
ENSTTRP00000006858/1-670 ELADSVLHLG SSLPRQTKNF SGNLPSNNED DTVLFPTSEE CVTEESLLPE
401 450
ENSBTAP00000008834/1-732 VGSSASITEG NAGEQSSGVG GMRKVNPEPC LINGDKGSKA KEQHLKHAAK
BACU006353/1-556 VGSFASFTEG NADEQSSGLE GTRKVNPESS LTNGDKGLKA TEQHLKYVAK
bmy_04287T0/1-459 VGSFASFTEG NADEQSSGLZ GTRKVNPESS LTNGDKGLKA TEQHLKHVAK
ENSTTRP00000006858/1-670 VGSFASFTEG NADEKSSGLE GTQKVNPEFS LTNGDKGLKA TEQHLKHVAR
451 500
ENSBTAP00000008834/1-732 VWNGESVEAS VLSRRELSPH KNRLLSPLRC SAPTSLHNSL AKPQRQSKCF
BACU006353/1-556 VLSGESVEAA VFDHRELSAH KNRLLSPLHC SAPMSLHHSL VKPQRQSKCF
bmy_04287T0/1-459 VLSGESVEAA VLDHRELSAH KNRLLSPLHC SAPMSLHNSL VKPQRQSKCF
ENSTTRP00000006858/1-670 VLSGESVETA VLDHRELSPH ENRLLSPLHC SAPMSLHNSL VKPQRQSKCF
501 550
ENSBTAP00000008834/1-732 ESGSLQSSAS QNLLRSLDVR NTCDSSFSRT TRFRAVKVDS TGKRSDIISK
BACU006353/1-556 ESGNLQSSAS QNVLRSLDIR NITDSSFSRT TRFRAVKVDS PGKRSDIISK
bmy_04287T0/1-459 ESGNLQSSAS QNVLRSLDVR NITDSSFSRT TRFRAVKVDS PGKRSDIISK
ENSTTRP00000006858/1-670 ESGNLQSSAS QNVLRSLDIR NITDSSFSRT TCFRAVKVDS PGKRSDIISK
551 600
ENSBTAP00000008834/1-732 VEARDITEMA NRASKEPVGF VNNIGFLASL ARSASRDSLQ SARGAGRLRA
BACU006353/1-556 VEARDITEMA NKATKEPVGC VNNIGFLASL ARSASRDSLQ STRGAGRLRT
bmy_04287T0/1-459 VEARDITEMA NKATKEPVGW VNNIGFLASL ARSASRDSLQ STRGAGRLRT
ENSTTRP00000006858/1-670 VEARDITEMA NKASKEPVGC VNNIGFLASL AQSASRDSLQ STHGAGRLRT
601 650
ENSBTAP00000008834/1-732 SGVGLSANLQ HFQEESLRRS SPQLETTEFF LSARGFGMNG NNTTSGKRV-
BACU006353/1-556 SGIGLFTNLQ HFQEESLRKS SPQLEPTEFF LSARGIGMNG NNTAAGKRVA
bmy_04287T0/1-459 SGIGLFTNLQ HFQEESLRKS SPQLEPTEFI LSARGIGMNG NNTAAGKRVG
ENSTTRP00000006858/1-670 SGIGLFTNLQ HFQEESLRKS SPQLEPTEFF LSARGIGMNG NNTAAGKRV-
651 700
ENSBTAP00000008834/1-732 -----GECSH HLPPVKAPIQ TKKKTTKHCF LCGKKTGLAT SYECRCGNNF
BACU006353/1-556 L----GKEVF SIFLFKFNII MPDR------ -------IPS PFQNK--NDT
bmy_04287T0/1-459 VLSPTGECTH HLPPVKAPIQ TKKKTTKHCF LCGKKTGLAT SYECR-----
ENSTTRP00000006858/1-670 -----GECAH HLPPVKAPIQ TKKKTTKHCF LCGKKTGLAT SYECRCGNNF
701 750
ENSBTAP00000008834/1-732 CASHRYAETH SCTYDYKSAG RRYLQEANPV VNAPKLPKI
BACU006353/1-556 CG-------- ---------- ---------- ---------
bmy_04287T0/1-459 ---------- -------QVG ---------- ---------
ENSTTRP00000006858/1-670 CASHRYAETH SCTYDYKSAG RRYLQEANPV VNAPKLPKI