KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:23 2014 Check: 00 .. Name: ENSBTAP00000008842/1-417 Len: 529 Check: 5415 Weight: 1.00 Name: ENSP00000353377/1-513 Len: 529 Check: 6916 Weight: 1.00 Name: ENSTTRP00000013999/1-512 Len: 529 Check: 6554 Weight: 1.00 Name: bmy_18332T0/1-332 Len: 529 Check: 3005 Weight: 1.00 Name: BACU013821/1-439 Len: 529 Check: 102 Weight: 1.00 // 1 50 ENSBTAP00000008842/1-417 ---------- -----MNLDS IHRLIEETHI FGMQQSCVRS PCDLAAPAPA ENSP00000353377/1-513 ---------- -----MNLDS IHRLIEETQI FQMQQSSIKS RGDMVAPASP ENSTTRP00000013999/1-512 ---------- -----MNLDS IHRLIEETQI FQMQQSSVKP PCDLGAPASS bmy_18332T0/1-332 MQLCSLSFLR PEKINMNLDS IHRLIEETQI FQMQQSSVKP PCDLGAPASS BACU013821/1-439 ---------- -----MNLDS IHRLIEETQI FQMQQSSVKP PCDLGAPASS 51 100 ENSBTAP00000008842/1-417 RGDPGSSCPS PLGPQSPAAR SGRAPSWSTS EWDIRAELRL RELEEVKARA ENSP00000353377/1-513 PRDTCNTCFP LHGLQSHAAH NFCAHSYNTN KWDICEELRL RELEEVKARA ENSTTRP00000013999/1-512 RRDTCSSCLP LHALQSHAAH NSHAHSCNIN DWGICEELRL RELEEVKARA bmy_18332T0/1-332 PRDTCSSCLP LHALQSHAAH NSHAHSCNIN DWGICEELRL RELEEVKARA BACU013821/1-439 RRDTCSSCLP LHALQSHAAH NSHAHSCSIN DWGICEELRL RELEEVKARA 101 150 ENSBTAP00000008842/1-417 AQMEKTMRWW SDCTANWREK WSKVRAERNS AREEGRQLRI KLDMAVKELS ENSP00000353377/1-513 AQMEKTMRWW SDCTANWREK WSKVRAERNS AREEGRQLRI KLEMAMKELS ENSTTRP00000013999/1-512 AQMEKTMRWW SDCTANWREK WSKVRAERNS AREEGRQLRI KLEMTMKELS bmy_18332T0/1-332 AQMEKTMRWW SDCTANWREK WSKVRAERNS AREEGRQLRI KLEMTMKELS BACU013821/1-439 AQMEKTMRWW SDCTANWREK WSKVRAERNS AREEGRQLRI KLEMTMKELS 151 200 ENSBTAP00000008842/1-417 ALKKKQPLPH PAEA-----T QDRKLPGFPE VARAQRDPLQ TGSKTCESIR ENSP00000353377/1-513 TLKKKQSLPP QKEALEAKVT QDLKLPGFVE ESCEHTDQFQ LSSQMHESIR ENSTTRP00000013999/1-512 ALKNKQSLSQ QKEALEARVT QDRKLPSFIE VSYAQRDPFQ IGSKTCESIR bmy_18332T0/1-332 ALKKKQSLSH QKEALEARVT QDWKLPSFKE VSYAQRDPFQ IGSKTCESIR BACU013821/1-439 ALKKKQSLSH QKEALEARVT QDWKLPSFIE VSYAQRDPFQ IGSKTCESIR 201 250 ENSBTAP00000008842/1-417 ECLGKREFPT KENANSKEAS LIIDPLKLSE EMKLSLDCPD LFKNGISENC ENSP00000353377/1-513 EYLVKRQFST KEDTNNKEQG VVIDSLKLSE EMKPNLDGVD LFNNGGSGNG ENSTTRP00000013999/1-512 ECLGKREYPT KENINSKEEG LIIDPLKLNE EVKLNLDCPD LFKNGGSENR bmy_18332T0/1-332 ECLGKREYPT KENINRKEEG LIIDPLKLNE EVKLNLDCPD LFKNGGSENC BACU013821/1-439 ECLGKREYPT KENIKRKEEG LIIDPLKLNE EVKLNLDCPD LFKNGGSENC 251 300 ENSBTAP00000008842/1-417 TVRPGLRLHF LTLPLRNSII SYVSSLQLHK KNYCKASWQK NKMRLSLEKE ENSP00000353377/1-513 ETKTGLRLKA INLPLENE-V TEISALQVHL DEFQKILWKE REMRTALEKE ENSTTRP00000013999/1-512 TVRPELRLQA INLPLENG-V PEISAL-VNL DEFQKILWKE REMRLSLEKE bmy_18332T0/1-332 TVRPGLRLQA INLPLENG-V PEISALQVHL DEFQKILWKE REMRLSLEKE BACU013821/1-439 TVRPGLRLQA INLPLENG-V PEISALQVHL DEFQKILWKE REMRLSLEKE 301 350 ENSBTAP00000008842/1-417 IERLESALSV WKWKYEELKE SKAKSLKQFD ILHGQHKNEM EEVSGLIREE ENSP00000353377/1-513 IERLESALSL WKWKYEELKE SKPKNVKEFD ILLGQHNDEM QELSGNIKEE ENSTTRP00000013999/1-512 IERLESALSV WKWKYEELKE SKAKSLKEFD ILHGQHKNKM EEISGDIKEG bmy_18332T0/1-332 IERLESALSV WKWKYEELKE SKTKSLKEI- ---------- ------IREQ BACU013821/1-439 IERLESALSV WKWKYEELKE SKTKSLKEFD ILHGQHKNKM EEISGDIKEG 351 400 ENSBTAP00000008842/1-417 SKSQNSNDRV VYELRAELER LQAENTSEWD KRELLEKEKQ GLERENRRLK ENSP00000353377/1-513 SKSQNSKDRV ICELRAELER LQAENTSEWD KREILEREKQ GLERENRRLK ENSTTRP00000013999/1-512 SKSKNSSDRV IYELRAELER LQAENTSEWD KREILETEKL GLERENRRLK bmy_18332T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU013821/1-439 LKSQNSSDRV IYELRAELER LQAENTSEWD KREILETEKL GLERENRRLK 401 450 ENSBTAP00000008842/1-417 VQVKEMEELL HRRNRLSENL EGPDFKTSGV ELQEKNK--- ---------- ENSP00000353377/1-513 IQVKEMEELL DKKNRLSANS QSPDFKMSQI DLQEKNQELL NLQHAYYKLN ENSTTRP00000013999/1-512 FQVKDMEELL DRKNRLIANS QGPDFKKSQI ELQEKNKELL DLQHAYHKLS bmy_18332T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU013821/1-439 FQVKDMEELL DRKNRLIANS QGPDFKKSQI ELQEKNKEVD QMYADAGTFF 451 500 ENSBTAP00000008842/1-417 ---------- ---------- ---------- ---------- ---------- ENSP00000353377/1-513 RQYQANIAEL THANNRVDQN EAEVKKLRLR VEELKQGLNQ KEDELDDSLN ENSTTRP00000013999/1-512 RQHQAKTAEM THVNNLMDQN EAEVKKLRFQ VEELKWGLNQ KENKLDDFLN bmy_18332T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU013821/1-439 CQEYD----- ---------- ---------- ---------- ---------- 501 550 ENSBTAP00000008842/1-417 ---------- ---------- --------- ENSP00000353377/1-513 QIRKLQRSLD EEKERNENLE TELRHLQNW ENSTTRP00000013999/1-512 QIHKLQRSLD EQKETNENLE LQLRHLQNW bmy_18332T0/1-332 ---------- ---------- --------- BACU013821/1-439 ---------- ---------- ---------