KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:23 2014 Check: 00 .. Name: ENSP00000261622/1-507 Len: 569 Check: 440 Weight: 1.00 Name: bmy_18288T0/1-351 Len: 569 Check: 6088 Weight: 1.00 Name: BACU004303/1-537 Len: 569 Check: 6873 Weight: 1.00 Name: ENSTTRP00000001293/1-505 Len: 569 Check: 434 Weight: 1.00 Name: ENSBTAP00000008848/1-505 Len: 569 Check: 9855 Weight: 1.00 // 1 50 ENSP00000261622/1-507 MAGAGPKRRA LAAP---AAE EKEEAREKML AAKSADGSAP AGEGEGVTLQ bmy_18288T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU004303/1-537 ---------- ---------- --------ML AARRADCA-- --EGEGVTLK ENSTTRP00000001293/1-505 MAGSGPKRRA AAAP-AAAEE EERQARERML AAQRADCA-- --EGEGVTLK ENSBTAP00000008848/1-505 MAGSGPKRRA AAATLPANEK EERQARERML AARGADGA-- --EGE-VTLQ 51 100 ENSP00000261622/1-507 RNITLLNGVA IIVGTIIGSG IFVTPTGVLK EAGSPGLALV VWAACGVFSI bmy_18288T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU004303/1-537 RSITLLNGVA IIVGTIIGSG IFVTPTGVLK EAGSPGLALV VWAVCGVFSI ENSTTRP00000001293/1-505 RNITLLNGVA IIVGTIIGSG IFVTPTGVLK EAGSPGLALV VWAVCGVFSI ENSBTAP00000008848/1-505 RNITLLNGVA IIVGTIIGSG IFVTPTGVLK EAGSPGLALV VWAVCGVFSI 101 150 ENSP00000261622/1-507 VGALCYAELG TTISKSGGDY AYMLEVYGSL PAFLKLWIEL LIIRPSSQYI bmy_18288T0/1-351 ---------- ---------- ---------- ---------- ---------- BACU004303/1-537 VGALCYAELG TTITKSGGDY AYMLEVYGSL PAFLKLWIEL LIIRPSSQYI ENSTTRP00000001293/1-505 VGALCYAELG TTITKSGGDY AYMLEVYGSL PAFLKLWIEL LIIRPSSQYI ENSBTAP00000008848/1-505 VGALCYAELG TTITKSGGDY AYMLEVYGSL PAFLKLWIEL LIIRPSSQYI 151 200 ENSP00000261622/1-507 VALVFATYLL ---------K PLFPTCPVPE -EAAKLVACL CVLLLTAVNC bmy_18288T0/1-351 ---------- ---------L GFSPPAPLPA FPRDSLAAPV STVLLTTVNC BACU004303/1-537 VALVFATYLL TLSQPVTSGL GFSPPAPLPA FLRDSLAAPV STVLLTTVNC ENSTTRP00000001293/1-505 VALVFATYLL ---------K PLFPTCPVPE -DAAKLVACL CVLLLTAVNC ENSBTAP00000008848/1-505 VALVFATYLL ---------K PIFPTCPVPE -EAAKLVACL CVLLLTAVNC 201 250 ENSP00000261622/1-507 YSVKAATRVQ DAFAAAKLLA LALIILLGFV QIGKGDVSNL DPNFSFEGTK bmy_18288T0/1-351 YSVKAATRVQ DAFAAAKLLA LALIILLGFI QIGKGNVSNL DPKSSFEGTK BACU004303/1-537 YSVKAATRVQ DAFAAAKLLA LALIILLGFI QIGKGNVSNL DPKSSFEGTK ENSTTRP00000001293/1-505 YSVKAATRVQ DAFAAAKLLA LALIILLGFI QIGKGNMSNL DPKSSFEGTK ENSBTAP00000008848/1-505 YSVKAATRVQ DAFAAAKLLA LALIILLGFI QIGKGDVANL DPKSSFEGTK 251 300 ENSP00000261622/1-507 LDVGNIVLAL YSGLFAYGGW NYLNFVTEEM INPYRNLPLA IIISLPIVTL bmy_18288T0/1-351 VDVGNIVLAL YSGLFAYGGW NYLNFVTEEM INPYRNLPLA IIISLPIVTL BACU004303/1-537 VDVGNIVLAL YSGLFAYGGW NYLNFVTEEM INPYRNLPLA IIISLPIVTL ENSTTRP00000001293/1-505 VDVGNIVLAL YSGLFAYGGW NYLNFVTEEM INPYRNLPLA IIISLPIVTL ENSBTAP00000008848/1-505 LDVGNIVLAL YSGLFAYGGW NYLNFVTEEM INPYRNLPLA IIISLPIVTL 301 350 ENSP00000261622/1-507 VYVLTNLAYF TTLSTEQMLS SEAVAVD--- ---------- ---------- bmy_18288T0/1-351 VYVLTNLAYF TTLSPEQMLT SEAVAVD--- ---------- ---------- BACU004303/1-537 VYVLTNLAYF TTLSPEQMLT SQAVAVGRCH LPLRAGRRPP SHDEERAGPL ENSTTRP00000001293/1-505 VYVLTNLAYF TTLSPEQMLT SEAVAVD--- ---------- ---------- ENSBTAP00000008848/1-505 VYVLTNLAYF TTLTPEQMLT SEAVAVD--- ---------- ---------- 351 400 ENSP00000261622/1-507 ---------- ---------- ------FGNY HLGVMSWIIP VFVGLSCFGS bmy_18288T0/1-351 ---------- ---------- ------FGNY HLGVMSWIIP VFVGLSCFGS BACU004303/1-537 VCTRRSYSEG LSSCFTEPAR GCRALAFGNY HLGVMSWIIP VFVGLSCFGS ENSTTRP00000001293/1-505 ---------- ---------- ------FGNY HLGVMSWIIP VFVGLSCFGS ENSBTAP00000008848/1-505 ---------- ---------- ------FGNY HLGVMSWIIP VFVGLSCFGS 401 450 ENSP00000261622/1-507 VNGSLFTSSR LFFVGSREGH LPSILSMIHP QLLTPVPSLV FTCVMTLLYA bmy_18288T0/1-351 VNGSLFTSSR LFFVGAREGH LPSILSMIHP RLLTPVPSLV FTCLMTLLYA BACU004303/1-537 VNGSLFTSSR LFFVGAREGH LPSILSMIHP RLLTPVPSLV FTCLMTLLYA ENSTTRP00000001293/1-505 VNGSLFTSSR LFFVGAREGH LPSVLSMIHP QLLTPVPSLV FTCVMTLLYA ENSBTAP00000008848/1-505 VNGSLFTSSR LFFVGAREGH LPSILSMIHP RLLTPVPSLV FTCIMTLLYA 451 500 ENSP00000261622/1-507 FSKDIFSVIN FFSFFNWLCV ALAIIGMIWL RHRKPELERP IKVNLALPVF bmy_18288T0/1-351 FSKDIFSVIN FFSFFNWLCV ALAIIGMIWL RYQKPDMERP IKVHLALPVL BACU004303/1-537 FSKDIFSVIN FFSFFNWLCV ALAIIGMIWL RYQKPDLERP IKVHLALPVL ENSTTRP00000001293/1-505 FSKDIFSVIN FFSFFNWLCV ALAIIGMIWL RYQKPDLERP IKVHLALPAS ENSBTAP00000008848/1-505 FSKDIFSVIN FFSFFNWLCV ALAIAGMLWL RYQKPELERP IKVHLALPVF 501 550 ENSP00000261622/1-507 FILACLFLIA VSFWKTPVEC GIGFTIILSG LPVYFFGVWW KNKPKWLLQG bmy_18288T0/1-351 FILACLFLIA VSFWKTPVEC GIGFTIILSG LPIYFLGVWW KNKPKWLLQS BACU004303/1-537 FILACLFLIA VSFWKTPVEC GIGFTIILSG LPVYFLGVWW RNKPKWLLQG ENSTTRP00000001293/1-505 FILACLFLIA VSFWKTPVEC GIGFAIILSG LPIYFLGVWW KNKPKWLLQS ENSBTAP00000008848/1-505 FILACLFLIA VSFWKTPVEC GIGFTIILSG LPVYFLGVWW RDKPKWLLQS 551 600 ENSP00000261622/1-507 IFSTTVLCQK LMQVVPQET bmy_18288T0/1-351 IFSTTVLCQK LMHVVPQET BACU004303/1-537 IFSTTVLCQK LMHVVPQET ENSTTRP00000001293/1-505 IFSTTVLCQK LMHVVPQET ENSBTAP00000008848/1-505 IFSTTVLCQK LMHVVPQET