KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:24 2014 Check: 00 .. Name: ENSP00000284601/1-1122 Len: 1128 Check: 6583 Weight: 1.00 Name: ENSBTAP00000008851/1-1112 Len: 1128 Check: 6277 Weight: 1.00 Name: bmy_02131T0/1-929 Len: 1128 Check: 8853 Weight: 1.00 Name: ENSTTRP00000014472/1-1105 Len: 1128 Check: 2615 Weight: 1.00 Name: BACU016472/1-1117 Len: 1128 Check: 7589 Weight: 1.00 // 1 50 ENSP00000284601/1-1122 MEPSEVPSQI SKDNFLEVPN LSDSLCEDEE V--TFQPGFS PQPSRRGSDS ENSBTAP00000008851/1-1112 MEPSEEPSQI SKDNFLEVPS LSDSLSEDEE VKATFRPGFS PQPSRRGSES bmy_02131T0/1-929 ---------- -MAYHVNDPH INDSLT---- ---------- ------GSST ENSTTRP00000014472/1-1105 MEPSEEPSQI SKDNFLEVPN VPDSLSEDEE VKATFRPGFS PQPSRRGSDS BACU016472/1-1117 MEPSEEPSQI SKDNHLEVPN LSDSLSEDEE VKATFRPGFS PQPSRRGSDS 51 100 ENSP00000284601/1-1122 SEDIYLDTPS SGTRRVSFAD SFGFNLVSVK EFDCWELPSA STTFDLGTDI ENSBTAP00000008851/1-1112 SEDLYLDSPP SGARRVSFAD TFGLNLVSVK EFDSWELPSG SADFDLRQDV bmy_02131T0/1-929 GK-------- ---------- -------PFQ YFCKYPLINA NPDIFFL-NV ENSTTRP00000014472/1-1105 SEDSYLDNPP SGARRVSFAD NFGFNLVSVK EFDSWEFPSG STDFDLM-DI BACU016472/1-1117 SEDIYLDTPP SGARRVSFAD NFGFNLVSVK EFDSWEFPSG STDFDLMKDI 101 150 ENSP00000284601/1-1122 FHTEEYVLAP LFDLPSSKED LMQQLQIQKA ILESTESLLG STSIKGIIRV ENSBTAP00000008851/1-1112 FHTEEYVLSP QFGLPSSKED LMQQLQVQKA ILESTEYPPG STSMKGIIRV bmy_02131T0/1-929 FKK------- ---------- ---------- -ISSESYISA SYNL------ ENSTTRP00000014472/1-1105 FHTEEYVLSP LFDLPSS-ED LMPQL-VQKA ILESTEYLHG STSMKGIIRV BACU016472/1-1117 FHTEEYVLSP LFDLPSSKED LMQQLQVQKA ILESTEYLPG STSMKGIIRV 151 200 ENSP00000284601/1-1122 LNVSFEKLVY VRMSLDDWQT HYDILAEYVP NSCDGETDQF SFKIVLVPPY ENSBTAP00000008851/1-1112 LNVSFEKLVY VRMSLDDWQS YYDILAEYIP NSCDGETDQF SFKISLVPPY bmy_02131T0/1-929 ---------I LTFTLTGWRE ---------- ---------- ---------- ENSTTRP00000014472/1-1105 LNISFEKLVY VRMSLDDWQT YYDILAEYVP NSCDGETDQF SFKILLVPPY BACU016472/1-1117 LNISFEKLVY VRMSLDDWQT YYDILAEYVP NSCDGETDQF SFKISLVPPY 201 250 ENSP00000284601/1-1122 QKDGSKVEFC IRYETSVGTF WSNNNGTNYT FICQKKEQEP EPVKPWKEVP ENSBTAP00000008851/1-1112 QKDGSKVEFC IRYETSVGTF WSNNNGTNYV LICQKKEQEP EPEKLQEDVP bmy_02131T0/1-929 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014472/1-1105 QKDGSKVEFC IRYETSVGTF WSNNNGTNYI LVCQKKEQEL EPGKLQEEVP BACU016472/1-1117 QKDGSKVEFC IRYETSVGTF WSNNNGTNYI LVCQKKEQEL EPGKLQEEVP 251 300 ENSP00000284601/1-1122 NRQIKGCLKV KSSKEESSVT SEENNFENPK NTDTYIPTII CSHEDKEDLE ENSBTAP00000008851/1-1112 NRQIKGCLKV KSSKEESSVT SDENNFENSK VTDTYIPTIV CSHEDKEDLE bmy_02131T0/1-929 --------RV NNIKEESLVT SDENNSENSK ITDTYIPTIV FSHEDKEDLE ENSTTRP00000014472/1-1105 NRQIKGCLKV KSSKEESLVT SDENNSENSK ITDTYVPTIV FSHEDKQDLE BACU016472/1-1117 NRQIKGCLKV KSSKEESLVT SDENNSENSK ITDTYIPTIV FSHEDKEDLE 301 350 ENSP00000284601/1-1122 ASNRNVKDVN REHDEHNEKE LELMINQHLI RTRSTASRDE RNTFSTDPVN ENSBTAP00000008851/1-1112 TSNQNVKDVN REQDERNEKE LEPMINQHLL --RSTASGDE KNT-----VN bmy_02131T0/1-929 TSNQNVKDVN TEHDEHNEKE LDLMINQHLX --RSTASRDE KNT-----VN ENSTTRP00000014472/1-1105 TSNQNVKDVN TEHDEHNEKE LDLMINQHLI --RSTASRDE KNT-----VN BACU016472/1-1117 TSNQNGKDVN TEHDEHNEKE LDLMINQHLI --RSTASRDE KNT-----VN 351 400 ENSP00000284601/1-1122 FPNKAEGLEK KQIHGEICTD LFQRSLSPSS SAESSVKGDF YCNEKYSSGD ENSBTAP00000008851/1-1112 FPNNAERLEK KQIHDDVYTD LFKRPSSSSS SAERSLKGDF YQGK-YFSGN bmy_02131T0/1-929 FPNKAEGLQK KQIHDEVYTD LFKRPLSSSS SAQRSLKGEF YHNEKYSSGN ENSTTRP00000014472/1-1105 FPNKAEGLQK KQIHDEVYTD LFNRTLSSSS SAE-SLKGEF YHNE-YSSGN BACU016472/1-1117 FPNKAEGLQK KQIHDEVYTD LFKRPLSSSS SAERSLKGEF YHNEKSSSGN 401 450 ENSP00000284601/1-1122 DCTHQPSEET TSNMGEIKPS LGDTSSDELV QLHTGSKEVL DDNANPAHGN ENSBTAP00000008851/1-1112 EHTYPPSEEF TSDTGEIKLS LGNTSSDEVV QLHIGSKEVL DDNANPAKGR bmy_02131T0/1-929 KCSYQPSEEI TSDMGEIKPS LGNTSSDELV QVHIGSKEVL DNNANPAQGR ENSTTRP00000014472/1-1105 KCSYQPSEEI TSDMGEIKPS LGNTSSD-LV Q-HIASK-VL D---NASARE BACU016472/1-1117 KCSYQPSEEI TSDMGEIKPS LGNTSSDELV QVHIGSKEVL DNNANPAQGR 451 500 ENSP00000284601/1-1122 GTVQIPCPSS DQLMAGNLNK KHEGGAKNIE VKDLGCLRRD FHSDTSACLK ENSBTAP00000008851/1-1112 GRVQMSCPSA DQLMADNLNK KLEGEAKEIE VKDWECLRGD FRL------E bmy_02131T0/1-929 GRVQISCPSA DQLMADNLNQ KXEGEAKKTE VKDWECLRSD FRSDFHS--E ENSTTRP00000014472/1-1105 SRVQISCPSA DQLMADNVNQ KLEGEAKQTE VKDWECLRSD FRLDFHS--E BACU016472/1-1117 GRVQISCPSA DQLMADNLNQ KREGEAKKTE VKDWECLRSD FHSDFHS--E 501 550 ENSP00000284601/1-1122 ESTEEGSSKE DYYGNGKD-D EEQRIYLGVN EKQRKNFQTI LHDQERKMGN ENSBTAP00000008851/1-1112 KSIEKGSSKK D-YGNGKNEE EEQKIYLGVS EKQSKSFQSV LHDQERKMSH bmy_02131T0/1-929 ESIEKGSSKK A-YGNGKNEE EEQRICLGVN EKHSKNFQSI LRDQERKMSH ENSTTRP00000014472/1-1105 ESIEKGSSKK A-YGNGKN-E EGQRICLGVN EKHSKDLQSI LHDQERKMSH BACU016472/1-1117 ESIEKGSSKK A-YGNGKNEE EEQRICLGVN EKHSKNFQSI LHDQERKMSH 551 600 ENSP00000284601/1-1122 PKISVAGIGA SNRDLATLLS EHTAIPTRAI TADVSHSPRT NLSWEEAVLT ENSBTAP00000008851/1-1112 SEISVEGMGA SNRDLTALPS KDTKIHDQSI RADTFHSPRT NLSLEETVSA bmy_02131T0/1-929 SEVSVEGMGA SNRDLTALPS KDTPIHDQSI RADTFHSPRT NLSWEEAVLT ENSTTRP00000014472/1-1105 SEISVEGMGA SNRDLTALPS KDTPIHDQSI RADIFHSPRT NLSWEEAVLT BACU016472/1-1117 SEISVEGMGA SNRDLTALPS KDTPIHDQSI RADTFHSPRT NLSCEEAVLT 601 650 ENSP00000284601/1-1122 PEHHHL-TSE GSALGGITGQ VCSSRTGNVL RNDYLFQV-E EKSGGINSED ENSBTAP00000008851/1-1112 TSDSDLSASK GTALGGMPGQ AGSPRNANVL RNKYLFQAEE EKSVWINPED bmy_02131T0/1-929 TSDLDLSTSE GTILGGMPGQ ACLPRNRNVL RNEYLFQVEE EKSAWINPED ENSTTRP00000014472/1-1105 TSDLELSTSE GTILGGMPGQ ACLPRNRNVL RNEYLFQVEE EKSAWINPED BACU016472/1-1117 TSDLDLSTTE GTILGGMPGQ ACLPRNRNVL RNEYLFQVEE EKSAWINSED 651 700 ENSP00000284601/1-1122 QDNSPQHKQS WNVLESQGKS RENKTNITEH IKGQTDCEDV WGKRDNTRSL ENSBTAP00000008851/1-1112 QNKNTQHKQS WNVLESQERA RGSKTTITEQ SKEQADCEDT WGKRDDTRSL bmy_02131T0/1-929 QNKNTQHKQS WNVLESQGRA RESKTNITEQ TKEQADCGDV WEKRDNTRSL ENSTTRP00000014472/1-1105 QNKNTQHKQS WNVLESQGRA RESKTNITEQ TKEQADCGDM WEKRDNTRNL BACU016472/1-1117 QNKNTQHKQS WNVLESQGRA RESKTNITEQ TKEQADCGDV WEKRDNTRSL 701 750 ENSP00000284601/1-1122 KAT-TEELFT CQETVCCELS SLADHGITEK AEAGTAYIIK TTSESTPESM ENSBTAP00000008851/1-1112 KANPTEELFT CQETASCELS SLADHGITEK ADAGTAYIIK TTSESTLECM bmy_02131T0/1-929 KANPTEELFT CQETASCELS SLADHGITEK AETGTAYIIK TTSETTLESM ENSTTRP00000014472/1-1105 KANPTEELFT CQETASCELS SLADHGITEK AEAGTAYIIK TTSESTLESM BACU016472/1-1117 KANPTEELFT CQETASCELS SLADHGITEK AETGTAYIIK TTSESTLESM 751 800 ENSP00000284601/1-1122 SAREKAIIAK LPQETARSDR PIEVKETAFD PHEGRNDDSH YTLCQRDTVG ENSBTAP00000008851/1-1112 SAREKAIIAK LPQETAQSDR PIEVKETAFD PHEGRNDDSH NTLCQRDTVG bmy_02131T0/1-929 SAREKAIIAK LPQETARSDR PIEVKETAFD PHEGRNDDSH DTLCQRDTVG ENSTTRP00000014472/1-1105 SAREKAIIAK LPQETARSDR PIEVKETAFD PHEGRNDDSH DTLCQRDTVG BACU016472/1-1117 SAREKAIIAK LPQETARSDR PIEVKETAFD PHEGRNDDSH DTLCQRDTVG 801 850 ENSP00000284601/1-1122 VIYDNDFEKE SRLGICNVRV DEMEKEETMS MYNPRKTHDR EKCGTGNITS ENSBTAP00000008851/1-1112 VIYDNDFEKE SCSGICNVHV DEKEKEETIA IYNPGETHDR KKCVIGNTTS bmy_02131T0/1-929 VIHDNDFEKE SRLGICNVHV DEMEKEETIS IYNPGKTHDR KKCVTGNTTP ENSTTRP00000014472/1-1105 IIYDNDFEKE SCLGICNVHV GEMEKEETIS IYNPGETHDR KKCVIGNTTS BACU016472/1-1117 VIYDNDFEKE SRLGICNVHV DEMEKEETIS IYNPGKTHDR KKCVTGNTTS 851 900 ENSP00000284601/1-1122 VEESSWVITE YQKATSKLDL QLGMLPTDKT VFSENRDLRQ VQELSKKTDS ENSBTAP00000008851/1-1112 GEESSQVITD NQKAASKLDL HLGMLPTDKK IFPENRDHEQ VQELSKKTII bmy_02131T0/1-929 VEESSQVITD YQKAASKLDL HLGMLPTDKK IFPENRDHGQ IQELSQKTNI ENSTTRP00000014472/1-1105 VEESSQVITD YQKAASKLDL HLGMLPTDEK IFPENRDHGQ IQELSKKTNI BACU016472/1-1117 VEESSQVITD YQKAASKLDL HLGMLPTDKK IFPENRDHGQ IQELSQKTNI 901 950 ENSP00000284601/1-1122 DAIVHSAFNS DTNRAPQNSS PFSKHHTEIS VSTNEQAIAV ENAVTTMASQ ENSBTAP00000008851/1-1112 DVIIHSSLNS DTNRTSQNGS QVSNHHAKSS VSSHEQATTT GHAITTMTLQ bmy_02131T0/1-929 DAIIHSALNS DTNRASQNGS HISNHHVKTS MPSHEQATAI ENAITTMTLQ ENSTTRP00000014472/1-1105 DAIIHSALNS DTNRASQNGS HISNHHVKTS LPSHEQATAI ENAITPKTLQ BACU016472/1-1117 DAIIHSALNS DTNRASQNGS HISNHHVKTS VPSHEQATAI ENAVTTKTLQ 951 1000 ENSP00000284601/1-1122 PISTKSENIC NSTREIQGIE KHPYPESKPE EVSRSSGIVT SGSRKERCIG ENSBTAP00000008851/1-1112 SISSKSEYNC NPTSEIQGTE KHSHPASPLE EVSESSGIVT SDSTKERCIG bmy_02131T0/1-929 SISSKSKYNC NTTSEIQGAE NHHHPASTPE EVSKSSRIVT SGSRRERCMG ENSTTRP00000014472/1-1105 SISSKSKYNC NPTSEIQGAE NHHHPASTPE EVSKSSRIVT SGSRRERCIG BACU016472/1-1117 SISSKSKYNR NPTSEIQGAE NHHHPASTPE EVSKSSRIVT SGSRRERCIG 1001 1050 ENSP00000284601/1-1122 QIFQTEEYSV EKSLGPMILI NKPLENMEEA RHENEGLVSS GQSLYTSGEK ENSBTAP00000008851/1-1112 QIVKQGECSV EKPLGPTILI SEASENIEGV RHENEGLINS GQSLYSSGDK bmy_02131T0/1-929 QTVQQGECSV EKSLGSTILI SEAFENMEEA RNEKEGLINS GQSLCSSGDK ENSTTRP00000014472/1-1105 QIVQQGECSV EKSLGPTILL SEAFENMEEA RNEKEGLINS GQSLCSSGDK BACU016472/1-1117 QIVQQGECSV EKSLGSTILI SEAFENMEEA RNEKEGLINS GQSLCSSGDK 1051 1100 ENSP00000284601/1-1122 ESDSSASTSL PVEESQAQGN ESLFSKYTNS KIPYFLLFLI FLITVYHYDL ENSBTAP00000008851/1-1112 ESDSPASDSL PAQESQSQ-S ESLLSKYINS KVPYFLLFLI FLVTIYQYDL bmy_02131T0/1-929 ESESPASGSL PAQESQAQ-R ESLLSKYTNS KIPYFLLFLI FLVTIYQYDL ENSTTRP00000014472/1-1105 ESESPDSDNL PAQESQAQ-R ESLLSKYTNS KIPYFLLFLI FLVTIYQYDL BACU016472/1-1117 ESESPASDSL PAQESQAQ-R ESLLSKYTNS KMPYFLLFLI FLVTIYQYDL 1101 1150 ENSP00000284601/1-1122 MIGLTFYVLS LSWLSWEEGR QKESVKKK ENSBTAP00000008851/1-1112 MIGLAFYLFS LYWLSWEGGR QKESVKKK bmy_02131T0/1-929 MTGLAFYVFS LYWLCWEGGR QKESVKKK ENSTTRP00000014472/1-1105 MTGLAFYVFS LYWLCWEGGR QKESVKKK BACU016472/1-1117 MTGLAFYVFS LYWLCWEGGR QKESVKKK