KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:33 2014 Check: 00 .. Name: bmy_05978T0/1-399 Len: 512 Check: 6314 Weight: 1.00 Name: BACU020568/1-418 Len: 512 Check: 6292 Weight: 1.00 Name: ENSTTRP00000016422/1-442 Len: 512 Check: 5415 Weight: 1.00 Name: ENSP00000232375/1-469 Len: 512 Check: 8194 Weight: 1.00 Name: ENSBTAP00000008887/1-469 Len: 512 Check: 8511 Weight: 1.00 // 1 50 bmy_05978T0/1-399 ATGGAGLRGR AEGRGIEWPE VARLLGWKQR SPTPPSPRMA SPRELTQNPL BACU020568/1-418 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016422/1-442 ---------- ---------- ---------- ---------- ---------- ENSP00000232375/1-469 ---------- ---------- ---------- --------MA SPRELTQNPL ENSBTAP00000008887/1-469 ---------- ---------- ---------- --------MA SPRELTQNPL 51 100 bmy_05978T0/1-399 KKIWMPYSNG RPALHACQRG -VCMTNCPTL IVMVGLPARG KTYISKKLTR BACU020568/1-418 ---------- ---------- -VCMTNCPTL IVMVGLPARG KTYISKKLTR ENSTTRP00000016422/1-442 ---------- ------VGRG LVCMTNCPTL IVMVGLPARG KTYISKKLTR ENSP00000232375/1-469 KKIWMPYSNG RPALHACQRG -VCMTNCPTL IVMVGLPARG KTYISKKLTR ENSBTAP00000008887/1-469 KKIWMPYSNG RPALHACQRG -VCMTNCPTL IVMVGLPARG KTYISKKLTR 101 150 bmy_05978T0/1-399 YLNWIGVPTR EFNVGQYRRN MVKTYKSFEF FLPDNEEGLK IRKQCALAAL BACU020568/1-418 YLNWIGVPTR EFNVGQYRRN MVKTYKSFEF FLPDNEEGLK IRKQCALAAL ENSTTRP00000016422/1-442 YLNWIGVPTR EFNVGQYRRD MVKTYKSFEF FLPDNEEGLK IRKQCALAAL ENSP00000232375/1-469 YLNWIGVPTR EFNVGQYRRD VVKTYKSFEF FLPDNEEGLK IRKQCALAAL ENSBTAP00000008887/1-469 YLNWIGVPTR EFNVGQYRRD MVKTYKSFEF FLPDNEEGLK IRKQCALTAL 151 200 bmy_05978T0/1-399 RDVRRFLSEE GGHVAVFDAT NTTRERRATI FNFGEQNGYK TFFVESICVD BACU020568/1-418 RDVRRFLSEE GGHVAVFDAT NTTRERRATI FNFGEQNGYK TFFVESICVD ENSTTRP00000016422/1-442 RDVRRFLSEE GGHVAVFDAT NTTRERRATI FNFGEQNGYK TFFVESICVD ENSP00000232375/1-469 RDVRRFLSEE GGHVAVFDAT NTTRERRATI FNFGEQNGYK TFFVESICVD ENSBTAP00000008887/1-469 RDVRRFLSEE GGHVAVFDAT NTTRERRATI FNFGEQNGYK TFFVESICVD 201 250 bmy_05978T0/1-399 PEVIAANIVQ VKLGSPDYVN HDSDEATEDF MRRIECYENS YESLDEDLDR BACU020568/1-418 PEVIAANIVQ VKLGSPDYVN HDSDEATEDF MRRIECYENS YESLDEDLDR ENSTTRP00000016422/1-442 PEVIAANIVQ VKLGSPDYVN HDSDEATEDF MRRIECYENS YESLDEDLDR ENSP00000232375/1-469 PEVIAANIVQ VKLGSPDYVN RDSDEATEDF MRRIECYENS YESLDEDLDR ENSBTAP00000008887/1-469 PEVIAANIVQ VKLGSPDYIN RDSDEAAEDF MRRIECYENS YETLDEDLDR 251 300 bmy_05978T0/1-399 DLSYIKIMDV GQSYIVNRVA DHIQSRIVYY LMNIHVTPRS IYLCRHGESE BACU020568/1-418 DLSYIKIMDV GQSYIVNRVA DHIQSRIVYY LMNIHVTPRS IYLCRHGESE ENSTTRP00000016422/1-442 DLSYIKIMDV GQSYIVNRVA DHIQSRIVYY LMNIHVTPRS IYLCRHGESE ENSP00000232375/1-469 DLSYIKIMDV GQSYVVNRVA DHIQSRIVYY LMNIHVTPRS IYLCRHGESE ENSBTAP00000008887/1-469 DLSYIKIMDV GQSYVVNRVA DHIQSRIVYY LMNIHVTPRS IYLCRHGESE 301 350 bmy_05978T0/1-399 LNLKGRIGGD PGLSARGREF ARSLAQFIRD QNIKDLKVWT SQMKRTIQTA BACU020568/1-418 LNLKGRIGGD PGLSARGREF ARSLAQFIRD QNIKDLKVWT SQMKRTIQTA ENSTTRP00000016422/1-442 LNLKGRIGGD PGLSARGREF ARSLAQFIRD QNIKDLKVWT SQMKRTIQTA ENSP00000232375/1-469 LNLKGRIGGD PGLSPRGREF AKSLAQFISD QNIKDLKVWT SQMKRTIQTA ENSBTAP00000008887/1-469 LNLKGRIGGD PGLSPRGREF AKSLAQFIRD QNIKDLKVWT SQMKRTIQTA 351 400 bmy_05978T0/1-399 EALGVPYEQW KVLNEIDAVI T--------- ---------- ---------- BACU020568/1-418 EALGVPYEQW KVLNEIDAGV CEEMTYEEIQ DHYPLEFALR DQDKYRYRYP ENSTTRP00000016422/1-442 EALGVPYEQW KVLNEIDAGV CEEMTYEEIQ DHYPLEFALR DQDKYRYRYP ENSP00000232375/1-469 EALGVPYEQW KVLNEIDAGV CEEMTYEEIQ DNYPLEFALR DQDKYRYRYP ENSBTAP00000008887/1-469 EALGVPYEQW KVLNEIDAGV CEEMTYEEIQ DHYPLEFALR DQDKYRYRYP 401 450 bmy_05978T0/1-399 ---------- ---------- ---------- ---------- --------IS BACU020568/1-418 KGESYEDLVQ RLEPVIMELE RQENVLVICH QAVMRCLLAY FLDKAAEQLP ENSTTRP00000016422/1-442 KGESYEDLVQ RLEPVIMELE RQENVLVICH QAVMRCLLAY FLDKAAEQLP ENSP00000232375/1-469 KGESYEDLVQ RLEPVIMELE RQENVLVICH QAVMRCLLAY FLDKAAEQLP ENSBTAP00000008887/1-469 KGESYEDLVQ RLEPVIMELE RQENVLVICH QAVMRCLLAY FLDKAAEQLP 451 500 bmy_05978T0/1-399 SLHCP---AL GTAALTQGDS VEGGQGELFL ---------- ---------- BACU020568/1-418 YLKCPLHTVL KLTPVAYGCK VES----IFL NVAAVNTHRD RPQ------- ENSTTRP00000016422/1-442 YLKCPLHTVL KLTPVAYGCK VES----IFL NVAAVNTHRD RPQNVDISRP ENSP00000232375/1-469 YLKCPLHTVL KLTPVAYGCK VES----IFL NVAAVNTHRD RPQNVDISRP ENSBTAP00000008887/1-469 YLKCPLHTVL KLTPVAYGCK VES----IFL NVAAVNTHRD RPQNVDISRP 501 550 bmy_05978T0/1-399 ---------- -- BACU020568/1-418 ---------- -- ENSTTRP00000016422/1-442 PEEALVTVPA HQ ENSP00000232375/1-469 PEEALVTVPA HQ ENSBTAP00000008887/1-469 PEEALVTVPA HQ