KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:35 2014 Check: 00 .. Name: ENSTTRP00000000836/1-460 Len: 474 Check: 8698 Weight: 1.00 Name: ENSP00000367923/1-463 Len: 474 Check: 6599 Weight: 1.00 Name: ENSBTAP00000008894/1-463 Len: 474 Check: 7581 Weight: 1.00 Name: bmy_09600T0/1-307 Len: 474 Check: 6196 Weight: 1.00 Name: BACU012196/1-474 Len: 474 Check: 7438 Weight: 1.00 // 1 50 ENSTTRP00000000836/1-460 MAASMFYSRL LAAATLRSHR SRTALQAAAQ VLGSSGLFNN HGLQIQQQQQ ENSP00000367923/1-463 MAASMFYGRL VAVATLRNHR PRTAQRAAAQ VLGSSGLFNN HGLQVQQQQQ ENSBTAP00000008894/1-463 MAASVFYSRL LAAATLRSHR PRTALPAAAQ VLGSSGLFNN HGVQIQHQQQ bmy_09600T0/1-307 MAAPMFYSRL LAAAALRSHR PRTALRAAA- ---------- ---------- BACU012196/1-474 MAAPMFYSRL LAAATLRSHR PRTALRAAAQ VLGSSGLFNN HGLQIQQQQQ 51 100 ENSTTRP00000000836/1-460 RNLSLHEYMS MELLQEAGVS IPKGHVAKSP DEAYAIAKKL XXXXXXXXXX ENSP00000367923/1-463 RNLSLHEYMS MELLQEAGVS VPKGYVAKSP DEAYAIAKKL GSKDVVIKAQ ENSBTAP00000008894/1-463 RNLSLHEYLS MELLQEAGVS IPKGHVAKSP DEAYAIAKKL GSKDVVIKAQ bmy_09600T0/1-307 ---------- ---------- ---------- ---------- ---------- BACU012196/1-474 RNLSLHEYLS MELLQEAGVS IPKGHVAKSP DEAYAIAKKL GSKDVVIKAQ 101 150 ENSTTRP00000000836/1-460 XXXXXXXXXX XXXXXXXXXX XXXXPEEAKA VSSQMIGKKL FTKQTGEKGR ENSP00000367923/1-463 VLAGGRGKGT FESGLKGGVK IVFSPEEAKA VSSQMIGKKL FTKQTGEKGR ENSBTAP00000008894/1-463 VLAGGRGKGT FESGLKGGVK IVFSPEEAKA VSSQMIGKKL FTKQTGEKGR bmy_09600T0/1-307 ---------- ---------- ---------- ---------- ---------- BACU012196/1-474 VLAGGRGKGT FESGLKGGVK IVFSPEEAKA VSSQMIGRKL FTKQTGEKGR 151 200 ENSTTRP00000000836/1-460 ICNQVLVCER RYPRREYYFA ITMERSFQGP VLIGSSQGGV NIEDVAAETP ENSP00000367923/1-463 ICNQVLVCER KYPRREYYFA ITMERSFQGP VLIGSSHGGV NIEDVAAESP ENSBTAP00000008894/1-463 ICNQVLVCER RYPRREYYFA ITMERSFQGP VLIGSSHGGV NIEDVAAETP bmy_09600T0/1-307 ---------- ---------- -------QGP VLIGSSQGGV NIEDVAAETP BACU012196/1-474 ICNQVLVCER RYPRREYYFA ITMERSFQGP VLIGSSQGGV NIEDVAAETP 201 250 ENSTTRP00000000836/1-460 EAIVKEPIDI VEGIKKEQAV R--------- --LAQKMGFP AHIVDSAAEN ENSP00000367923/1-463 EAIIKEPIDI EEGIKKEQAL Q--------- --LAQKMGFP PNIVESAAEN ENSBTAP00000008894/1-463 EAIVKEPIDI VEGIKKEQAV R--------- --LAQKMGFP ASIVDSAAEN bmy_09600T0/1-307 EAIVKEPIDI VEGIKKEQAV RHSYNKETNC FQLAQKMGFP ANIVDSAAEN BACU012196/1-474 EAIVKEPIDI EEGIKKEQAV RHSYNKETNC FQLAQKMGFP ATIVDSAAEN 251 300 ENSTTRP00000000836/1-460 MIKLY-LFLK YD-TMVEIN- MVEDSDGAVL CMDAKINFDS NSAYRQKKIF ENSP00000367923/1-463 MVKLYSLFLK YDATMIEINP MVEDSDGAVL CMDAKINFDS NSAYRQKKIF ENSBTAP00000008894/1-463 MIKLYDLFLK YDATMVEINP MVEDSDGAVL CMDAKINFDS NSAYRQKKIF bmy_09600T0/1-307 MIKLYNLFLK YDATMVEINP MVEDSDGAVL CMDAKINFDS NSAYRQKKIF BACU012196/1-474 MIKLYNLFLK YDATMVEINP MVEDSDGAVL CMDAKINFDS NSAYRQKKIF 301 350 ENSTTRP00000000836/1-460 DLQDWTQEDE RDKDAAKADL NYIGLDGNIG CLVNGAGLAM ATMDIIKLHG ENSP00000367923/1-463 DLQDWTQEDE RDKDAAKANL NYIGLDGNIG CLVNGAGLAM ATMDIIKLHG ENSBTAP00000008894/1-463 DLQDWTQEDE RDKDAAKADL NYIGLDGNIG CLVNGAGLAM ATMDIIKLHG bmy_09600T0/1-307 DLQDWTQEDE RDKDAAKADL NYIGLDGNIG CLVNGAGLAM ATMDIIKLHG BACU012196/1-474 DLQDWTQEDE RDKDAAKADL NYIGLDGNIG CLVNGAGLAM ATMDIIKLHG 351 400 ENSTTRP00000000836/1-460 GTPANFLDVG GGATVHQVTE AFKLITSDKK XXXXXXXXXX XXXXXXXXXX ENSP00000367923/1-463 GTPANFLDVG GGATVHQVTE AFKLITSDKK VLAILVNIFG GIMRCDVIAQ ENSBTAP00000008894/1-463 GTPANFLDVG GGATVHQVTE AFKLITSDKK VLSILVNIFG GIMRCDVIAQ bmy_09600T0/1-307 GTPANFLDVG GGATVHQVTE AFKLITSDKK VLSILVNIFG GIMRCDVIAQ BACU012196/1-474 GTPANFLDVG GGATVHQVTE AFKLITSDKK VLSILVNIFG GIMRCDVIAQ 401 450 ENSTTRP00000000836/1-460 XXXXXXXXXX XXXXXXXXXX XTRVDDAKAL IADSGLKILA CDDLDEAAKM ENSP00000367923/1-463 GIVMAVKDLE IKIPVVVRLQ GTRVDDAKAL IADSGLKILA CDDLDEAARM ENSBTAP00000008894/1-463 GIVMAVKDLE IKIPIVVRLQ GTRVDDAKAL IADSGLKILA CDDLDEAAKM bmy_09600T0/1-307 GIVMAVKDLE IKIPIVVRLQ GTRVDDAKAL IADSGLKILA CDDLDEAAKM BACU012196/1-474 GIVMAVKDLE IKIPIVVRLQ GTRVDDAKAL IADSGLKILA CDDLDEAAKM 451 500 ENSTTRP00000000836/1-460 VVKLSEIVTL AKQAQVDVKF QLPI ENSP00000367923/1-463 VVKLSEIVTL AKQAHVDVKF QLPI ENSBTAP00000008894/1-463 VVKLSEIVTL AKQAQVDVKF QLPI bmy_09600T0/1-307 VNRLC----- ---------- ---- BACU012196/1-474 VVKLSEIVTL AKQAQVDVKF QLPI