KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:37 2014 Check: 00 .. Name: ENSBTAP00000008906/1-898 Len: 1088 Check: 1063 Weight: 1.00 Name: ENSP00000303398/1-904 Len: 1088 Check: 6768 Weight: 1.00 Name: bmy_19448T0/1-940 Len: 1088 Check: 2955 Weight: 1.00 Name: BACU013210/1-739 Len: 1088 Check: 5371 Weight: 1.00 Name: ENSTTRP00000005621/1-903 Len: 1088 Check: 8323 Weight: 1.00 // 1 50 ENSBTAP00000008906/1-898 MDRYLLLAVW GEGK--AAAA AGSGRGPEAS RVEGPGRPPD LRAANVYHLL ENSP00000303398/1-904 MDRYLLLVIW GEGKFPSAAS REAEHGPEVS SGEGTENQPD FTAANVYHLL bmy_19448T0/1-940 ---------- ---------- ---------- ---------- ---MNAIELQ BACU013210/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005621/1-903 MDRYLLLVIW EEEKVPSVAS AVAEHGPGAS SSEGTEKQPD LRAANVYHLL 51 100 ENSBTAP00000008906/1-898 KRSITASLSP EDSTFPACSV GGIPGSRKWF FAVQAICGFY QFCSSHWEEI ENSP00000303398/1-904 KRSISASINP EDSTFPACSV GGIPGSKKWF FAVQAIYGFY QFCSSDWQEI bmy_19448T0/1-940 ESDLTWGALE KLDMFPQIVS GGV------- ---------- ---------- BACU013210/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005621/1-903 KRSINASINP EDSTFPGCLV GGLPGSRKWF FAVQAICGFY QFCSSDWEEI 101 150 ENSBTAP00000008906/1-898 HFGAEKDDIE DVLQTNTEEC LSAVECFEEE DSNSRESLSL ADLYEESAEG ENSP00000303398/1-904 HFDTEKDKIE DVLQTNIEEC LGAVECFEEE DSNSRESLSL ADLYEEAAEN bmy_19448T0/1-940 ---------- ---------- --MISSYE-- ---------- ---------- BACU013210/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005621/1-903 HFGVEKDEIE DVLQRNIEEC LSAVECFEDE DSNSRESLSL ADLYEESAEN 151 200 ENSBTAP00000008906/1-898 LHQLSDKLPA PGRAMIDIIL LPSDKDPPKL RDCLPTVGAL KHLKEWYSAK ENSP00000303398/1-904 LHQLSDKLPA PGRAMVDIIL LLSDKDPPKL KDYLPTVGAL KHLREWYSAK bmy_19448T0/1-940 ---------- -SRAMIDIIL LPSDKDPPKL RDCLPTVGAL KHLKEWYSAK BACU013210/1-739 ---------- ----MIDIIL LPSDKDPPKL RDCLPTVGAL KHLKEWYSAK ENSTTRP00000005621/1-903 LHQLSDKLRA PGRAMIDIIL LPSDKDPPKL RDCLPTVGAL KHLKEWYSAK 201 250 ENSBTAP00000008906/1-898 ITIAGDHCEI NYQKIAEYLS ANTVSFEDLR NAIDSKELWR GKIQIWERKF ENSP00000303398/1-904 ITIAGNHCEI NCQKIAEYLS ANVVSLEDLR NVIDSKELWR GKIQIWERKF bmy_19448T0/1-940 ITIAGNHCET SCQKIAEYLS ANIVSLQDLR NAIDSKELWR GKIQIWERKA BACU013210/1-739 ITIAGNHCET SCQKIAEYLS ANIVSLQDLR NAIDSKELWR GKIQIWERKF ENSTTRP00000005621/1-903 ITIAGNHCET SCQKIAEYLS ANIVSLQDLR NAIDSKELWR GKIQIWERKF 251 300 ENSBTAP00000008906/1-898 GSEISF---P EFCLKGV--- ------TPKN FSTSNLKTCF LD-KKIIPSK ENSP00000303398/1-904 GFEISF---P EFCLKGV--- ------TLKN FSTSNLNTDF LA-KKIIPSK bmy_19448T0/1-940 KLKESFLIIP KFILECLFFL FLSFADPLQH PSLLAYLSVF LEINRKISKK BACU013210/1-739 GCEISF---P EFCLKGV--- ------TPKN FSTSNLKTSF LD-KKIIPSK ENSTTRP00000005621/1-903 GCEISF---P EFCLKGV--- ------TPKN FSTSNLKTCF LD-KKIIPSK 301 350 ENSBTAP00000008906/1-898 DKDILPK--- ---------- --VFHYYGPA LEFVQMIKLS DLPSCYMSDI ENSP00000303398/1-904 DKNILPK--- ---------- --VFHYYGPA LEFVQMIKLS DLPSCYMSDI bmy_19448T0/1-940 SPYCSTRKGR IDMEEILICD RGVFHYYGPA LEFVQMIKLS DLPSCYMSDI BACU013210/1-739 DKSILPK--- ---------- --VFHYYGPA LEFVQMIKLS DLPSCYMSDI ENSTTRP00000005621/1-903 DKSILPK--- ---------- --VFHYYGPA LEFVQMIKLS DLPSCYMSDI 351 400 ENSBTAP00000008906/1-898 EFELGLTKNS TKQTSRLLLE QISSLCGEAG ALFVLPCTIG SI-LTPPPSQ ENSP00000303398/1-904 EFELGLT-NS TKQNSVLLLE QISSLCSKVG ALFVLPCTIS NI-LIPPPNQ bmy_19448T0/1-940 EFE------- ---------- ----LCVRKG NLLVAGTGEN KVDKVPPWEA BACU013210/1-739 EFELGLTKNN TKQNSKLLLE QISSLCGKVG ALFVLPCTIS SI-LIPPPSQ ENSTTRP00000005621/1-903 EFELGLTENN TKQNSKLLLE QVSSLCGKVG ALFVLPCTIS SI-LTPPPSQ 401 450 ENSBTAP00000008906/1-898 LSSRRWK--E YMARKPRTIT VPDVEVKGES SSYYLLLQGN GNGKCKATLI ENSP00000303398/1-904 LSSRKWK--E YIAKKPKTIS VPDVEVKGEC SSYYLLLQGN GNRRCKATLI bmy_19448T0/1-940 VKEELWELNN HANCKSVSLC VPDVEVKGES SSYYLLLQGN GNRQCKATLI BACU013210/1-739 LSSRKWK--E YIARKPKTIS VPDVEVKGES SSYYLLLQGN GNRKCKATLI ENSTTRP00000005621/1-903 LSSRKWK--E YIARKPKTIS VPDVEVKGES SSYYLLLQGN GNRKCKATLI 451 500 ENSBTAP00000008906/1-898 HSANQINGSF ALSLIHGKMK ATTEETKLSF PLDLSSLPSF SREQLIQREK ENSP00000303398/1-904 HSANQINGSF ALNLIHGKMK TKTEEAKLSF PFDLLSLPHF SGEQIVQREK bmy_19448T0/1-940 HSANQINGSF ALSLIHGKMK AKTEETKLSF PLDLLSLPNF SGEQLIQREK BACU013210/1-739 HSANQINGSF ALSLIHGKMK AKTEETKLSF PLDLLSLPNF SGEQLIQREK ENSTTRP00000005621/1-903 HSANQINGSF ALSLIHGKMK AKTEETKLSF PLDLLSLPNF SGEQLIQREK 501 550 ENSBTAP00000008906/1-898 QLAGVQALAV KECLKRRKLA KQREVISVDE LKSLLTCTRE RFLGHFDAVL ENSP00000303398/1-904 QLANVQVLAL EECLKRRKLA KQPETVSVAE LKSLLVLTRK HFLDYFDAVI bmy_19448T0/1-940 QLANVQALAL KECLKRRKLA KQPEVLSGDE LKSLLILTRE CFFDHFDAII BACU013210/1-739 QLANVQALAL KECLKRRKLA KRPGVLSEDE LKSLLILTRE CFFDHFDAII ENSTTRP00000005621/1-903 QLANVQALAL KECLKRRKLA KQPEVLSVDE LKSLLILTRE CFFDHFDAII 551 600 ENSBTAP00000008906/1-898 PKTSLIKTD- -KTSSMLHDN SSLELTSSRL VETNPLEWPE RHVLQNLETC ENSP00000303398/1-904 PKMILRKMDK IKTFNILNDF SPVEPNSSSL METNPLEWPE RHVLQNLETF bmy_19448T0/1-940 PKTSLIKTD- -NTSNMLNDS NPVEPTSSSL VETNPLEWPE RHVLQNLETF BACU013210/1-739 PKTSLIKTD- -NTSNMLNDS NPVEPISSSL VETNPLEWPE RHVLQNLETF ENSTTRP00000005621/1-903 PKTSLIKTD- -NTSNRLNDS NPVERISSSL VETNPLEWPE RHVLQNLETF 601 650 ENSBTAP00000008906/1-898 EKAKQKMRTG SLPRSSEQLL GHKEGPRDSV TLLDAKELLK FFTSDGLPIG ENSP00000303398/1-904 EKTKQKMRTG SLPHSSEQLL GHKEGPRDSI TLLDAKELLK YFTSDGLPIG bmy_19448T0/1-940 EKAKQKMRTG SLPRSSEQLL GHKEGPRDSV TLLDAKELLK FFTSDGLPIG BACU013210/1-739 EKAKQKMRTG SLPRSSEQLL GHKEGPRDSV TLLDAKELLK FFTSDGLPIG ENSTTRP00000005621/1-903 EKAKQKMRTG SLPRSSEQLL GHKEGPRDSV TLLDAKELLK FFTSDGLPIG 651 700 ENSBTAP00000008906/1-898 DLQPLQIQKG EKTFVLTPEL SPQKLRGLPF EKASVCHYHG IEYCLDDRKA ENSP00000303398/1-904 DLQPLPIQKG EKTFVLTPEL SPGKLQVLPF EKASVCHYHG IEYCLDDRKA bmy_19448T0/1-940 DLQPLQIQKG EKTFVLTPEL SPRKLRGLPF EKASVCHYHG IEYCLDDRKA BACU013210/1-739 DLQPLQIQKG EKTFVLTPEL SPRKLRGLPF EKASVCHYHG IEYCLDDRKA ENSTTRP00000005621/1-903 DLQPLQIQKG EKTFVLTPEL SPRKLQGLPF EKASVCHYHG IEYCLDDRKA 701 750 ENSBTAP00000008906/1-898 LERDGGFSEL QSRLIRYETQ STCARGSSPG PTVLSPLPSP AVLSEPLSVP ENSP00000303398/1-904 LERDGGFSEL QSRLIRYETQ TTCTRESFPV PTVLSPLPSP VVSSDPGSVP bmy_19448T0/1-940 LERDGGFSEL QSRLIRYETQ TTCTRESFPV PTVLSPLPSP AVLSEPGSVP BACU013210/1-739 LERDGGFSEL QSRLIRYETQ TTCTRESFPV PTVLSPLPSP AVLSEPGSVP ENSTTRP00000005621/1-903 LERDGGFSEL QSRLIRYETQ TTCTRESFPV PTVLSPLPSP AVLSEPGSVP 751 800 ENSBTAP00000008906/1-898 DGEALQRELR TDVSRVKRRS KDVNCLYPPK RLVRSGSSDS LLSQTSGSGH ENSP00000303398/1-904 DGEVLQNELR TEVSRLKRRS KDLNCLYPRK RLVKSESSES LLSQTTGNSN bmy_19448T0/1-940 DGEVLQSELR TEVSRVKRRS KDLNCLYPPK RLVKSESSDS LLSQRSGSTN BACU013210/1-739 DGEVLQSELR TEVSRVKRRS KDLNCLYPPK RLVKSESSDS LLSQRSGSTN ENSTTRP00000005621/1-903 DGEALQSELR TEVSRGKRRS KDLNCLYPPK RLVKSESSDS LLSQRSGITN 801 850 ENSBTAP00000008906/1-898 H-HHAVPSRK LRAERPLPVT CRSA--LSSE TPGATAKAGS GPKAVRESET ENSP00000303398/1-904 HYHHHVTSRK PQTERSLPVT CPLVPIPSCE TPKLATKTSS GQKSMHESKT bmy_19448T0/1-940 HRHHAVTSRK PQAERSLSVT CPSVPVLSNE TPKVTTNASS GQKSVHESKA BACU013210/1-739 HRHHAVTSRK PQTERSLSVT CPSVPVLSNE TPKVTTNASS GQKSVHESKA ENSTTRP00000005621/1-903 HHHHAVTSRK PRAERSLPVT CPSLPVLSSE TPKVTTNASS GQKSVPESKT 851 900 ENSBTAP00000008906/1-898 SRPAKESRSQ KHTRILKEVV AETLKKHGIT EAHGCFSACS QRLFEISKFY ENSP00000303398/1-904 SRQIKESRSQ KHTRILKEVV TETLKKHSIT ETHECFTACS QRLFEISKFY bmy_19448T0/1-940 SRPTKESRSQ KHTRILKEVV TETLKKHRIT EAHECFTACS QRLFEISKFY BACU013210/1-739 SRPSKESRSQ KHTRILKEVV TETLKKHRIT EAHECFTACS QRLFEISKFY ENSTTRP00000005621/1-903 SRPSKESRSQ KHTRILKEVV TETLKKHRIT EAHECFTACS QRLFEISKFY 901 950 ENSBTAP00000008906/1-898 LKDLKTSRGL FEEMKKTTNN NVVQVIEW-- ---------- ---------- ENSP00000303398/1-904 LKDLKTSRGL FEEMKKTANN NAVQVIDW-- ---------- ---------- bmy_19448T0/1-940 LKDLKTSRGL FEEMKKTASN NVVQVNKLFP RNYIQLNCYF IAAISHGSKI BACU013210/1-739 LKDLKTSRGL FEEMKKTASN NVVQVIEW-- ---------- ---------- ENSTTRP00000005621/1-903 LKDLKTSRGL FEEMKKTASN NVVQVIEW-- ---------- ---------- 951 1000 ENSBTAP00000008906/1-898 ---------- ---------- ---------- ---------- ---------- ENSP00000303398/1-904 ---------- ---------- ---------- ---------- ---------- bmy_19448T0/1-940 ADLGYECSPR INHLSRTPLF SKALQFKQST LAQNPPAYSS DQYLMLYLIL BACU013210/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005621/1-903 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSBTAP00000008906/1-898 ---------- ---------- ---------- -VLE------ ---------- ENSP00000303398/1-904 ---------- ---------- ---------- -VLE------ ---------- bmy_19448T0/1-940 THHKLIRTLQ NHSTSLKDNS LRKTSPLYPF TVLKRQFYSD SPCGIFLKLN BACU013210/1-739 ---------- ---------- ---------- -VLE------ ---------- ENSTTRP00000005621/1-903 ---------- ---------- ---------- -VLE------ ---------- 1051 1100 ENSBTAP00000008906/1-898 ----KARKK- ---------- ---------- -------- ENSP00000303398/1-904 ----KTSKK- ---------- ---------- -------- bmy_19448T0/1-940 KAHFRNRKKC FLSFPDDLIV LGPGKAAVAD RCQMWHLR BACU013210/1-739 ----KTSKK- ---------- ---------- -------- ENSTTRP00000005621/1-903 ----KTSKK- ---------- ---------- --------