KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:39 2014 Check: 00 .. Name: ENSP00000251993/1-409 Len: 589 Check: 9233 Weight: 1.00 Name: ENSBTAP00000008911/1-386 Len: 589 Check: 3339 Weight: 1.00 Name: ENSTTRP00000000908/1-451 Len: 589 Check: 1444 Weight: 1.00 Name: bmy_04245T0/1-365 Len: 589 Check: 2938 Weight: 1.00 Name: BACU013468/1-541 Len: 589 Check: 2611 Weight: 1.00 // 1 50 ENSP00000251993/1-409 ---------- ---------- ---------M GSQAAAEWRN WASWEVSSSL ENSBTAP00000008911/1-386 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000908/1-451 IHRLESCAMG GLWPASLGAP WWGVREKGAH HRVLAAFPET WGTGPGPAKV bmy_04245T0/1-365 ---------- ---------- ---------- ---------- ---------- BACU013468/1-541 ---------- ---------- ---------- --MLRAIAEE RGRLSLRREV 51 100 ENSP00000251993/1-409 SGC------- ------SMGC FKDDRIVFWT WMFSTYFMEK WAPRQDDMLF ENSBTAP00000008911/1-386 ---------- -------AGC FKDDRIVFWT WMFSTYFMEK WAPRQDDMLF ENSTTRP00000000908/1-451 TGLGPGPSFL TPLWPPCAGC FKDDRIVFWT WMFSTYFMEK WAPRQDDMLF bmy_04245T0/1-365 ---------- ---------- ---------- -MFSTYFMEK WAPRQDDMLF BACU013468/1-541 CGL------- --------GC FKDDRIVFWT WMFSTYFMEK WAPRQDDMLF 101 150 ENSP00000251993/1-409 YVRRKLAYSG SESGADGRK- -AAEPEVEVE VYRRDSKKLP GLGDPDIDWE ENSBTAP00000008911/1-386 YVRRKLAFAG SEGALDGRKL AEAEPEVEVE VYRRDSKKLP GLGDPDIDWE ENSTTRP00000000908/1-451 YVRRKLAYVG SEGAVDGRK- -EAEPEVEVE VYRRDSKKLP GLGDPDIDWE bmy_04245T0/1-365 YVRRKLAYVG SEGAVDGRKL AEAEPEVEVE VYRRDSKKLP GLGXPDIDWE BACU013468/1-541 YVRRKLAYVG SEGAVDGRKL AEAEPEVEVE VYRRDSKKLP GLGDPDIDWE 151 200 ENSP00000251993/1-409 ESVCLNLILQ KLDYMVTCAV CTRADGGDIH IHKKKSQQVF ASPSKHPMDS ENSBTAP00000008911/1-386 ESVCLNLILQ KLDYMVTCAV CTRADGGDIH IHRKRSQQVF ASPSKHPMDS ENSTTRP00000000908/1-451 ESVCLNLILQ KLDYMVTCAV CTRTDGGDIH VHKKKSQQVF ASPSKHPMDS bmy_04245T0/1-365 ESVCLNLILQ KLDYMVTCAV CTRADGGDIH IHKKKSQQVF ASPSKHPMDS BACU013468/1-541 ESVCLNLILQ KLDYMVTCAV CTRADGGDIH IHKKKSQQVF ASPSKHPMDS 201 250 ENSP00000251993/1-409 KGEESKISYP NIFFMIDSFE EVFSDMTVGE GEMVCVELVA SDKTNTFQGV ENSBTAP00000008911/1-386 KGEESKISYP NIFFMIDSFE EVFSDMTVGE GEMVCVELVA SDKTNTFQGV ENSTTRP00000000908/1-451 KGEESKISYP NIFFMIDSFE EVFSDMTVGE GEMVCVELVA SDKSNTFQGV bmy_04245T0/1-365 KGEESKISYP NIFFMIDSFE EVFSDMTVGE GEMVCVELVA SDKTNTFQGV BACU013468/1-541 KGEESKISYP NIFFMIDSFE EVFCDMTVGE GEMVCVELVA SDKTNTFQGV 251 300 ENSP00000251993/1-409 IFQGSIRYEA LKKVYDNRVS VAARMAQKMS FGFYKYSNME FVRMKGPQGK ENSBTAP00000008911/1-386 IFQGSIRYEA LKKVYDNRVS VAARMAQKMS FGFYKYSNME FVRMKGPQGK ENSTTRP00000000908/1-451 IFQGSIRYEA LKKVYDNRVS VAARMAQKMS FGFYKYNNME FVRMKGPQGK bmy_04245T0/1-365 IFQGSIRYEA LKKVYDNRVS VAARMAQKMS FGFYKYSNME FVRMKGPQGK BACU013468/1-541 IFQGSIRYEA LKKVYDNRVS VAARMAQKMS FGFYKYNNME FVRMKGPQGK 301 350 ENSP00000251993/1-409 GHAEMAVSRV STGDTSPCGT EEDSSPASPM HERVTSFSTP PTPERNNRPA ENSBTAP00000008911/1-386 GHAEMAVSRV STGDTSPCGT EEDSSPASPM HERVTSFSTP PTPERNNRPA ENSTTRP00000000908/1-451 GHAEMAVSRV STGDTSPCGT EEDSSPASPM HERVTSFSTP PTPERNHRPA bmy_04245T0/1-365 GHAEMAVSRV STGDTSPCGT EEDSSPASPM HERVTSFSTP PTPERNHRPA BACU013468/1-541 GHAEMAVSRV STGDTSPCGT EEDSSPASPM HERVTSFSTP PTPERNHRPA 351 400 ENSP00000251993/1-409 FFSPSLKRKV PRNRIAEMKK SHSANDSEEF FREDDGGADL HNATNLRSRS ENSBTAP00000008911/1-386 FFSPSLKRKG PRNRITEMKK SHSANDSEEF FREDDGGADL HNATNLRSRS ENSTTRP00000000908/1-451 FFSPSLRRKV PRSRMAEMKK SHSANDSEEL FREDDGGADL HNATNLRSRS bmy_04245T0/1-365 FFSPSLRRKV PRSRMAEMKK SHSANDSEEL FREDDGGADL HNATNLRSRS BACU013468/1-541 FFSPSLRRKV PRSRMAEMKK SHSANDSEEL FREDDGGADL HNATNLRSRS 401 450 ENSP00000251993/1-409 LSGTGRSLVG SWLKLNRADG NFLLYAHLTY VTLPLHRILT D-ILEVRQKP ENSBTAP00000008911/1-386 LSGTGRSLVG SWLKLNRADG NFLLYAHLTY VTLPLHRILT D-ILEVRQKP ENSTTRP00000000908/1-451 LSGTGRSLVG SWLKLNRTDG NFLLYAHLTY VTLPLHRILT D-ILEVRQKP bmy_04245T0/1-365 LSGTGRSLVG SWLKLNRTDG NFLLYAHLTY VTLPLHRILT DGALGV---- BACU013468/1-541 LSGTGRSLVG SWLKLNRTDG NFLLYAHLTY VTLPLHRILT D-AGSVLGRN 451 500 ENSP00000251993/1-409 ILMT------ ---------- ---------- ---------- ---------- ENSBTAP00000008911/1-386 ILMT------ ---------- ---------- ---------- ---------- ENSTTRP00000000908/1-451 ILMT------ ---------- ---------- ---------- ---------- bmy_04245T0/1-365 ---------- ---------- ---------- ---------- ---------- BACU013468/1-541 AALTYLPWKD EVVLHTHSAA TLPVLIGEEP EKGPPTPEPE TGSSSNPVSS 501 550 ENSP00000251993/1-409 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008911/1-386 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000908/1-451 ---------- ---------- ---------- ---------- ---------- bmy_04245T0/1-365 ---------- ---------- ---------- ---------- ---------- BACU013468/1-541 WITLRSTGQG QGYLNSIHHL LTKLLMNTPS CKKSKVTAPP PNLTPHPVDA 551 600 ENSP00000251993/1-409 ---------- ---------- ---------- --------- ENSBTAP00000008911/1-386 ---------- ---------- ---------- --------- ENSTTRP00000000908/1-451 ---------- ---------- ---------- --------- bmy_04245T0/1-365 ---------- ---------- ---------- --------- BACU013468/1-541 TPAQQSERLP LRVAGRTKSH AGPNPPNGAR KMRAAAQAS