KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:40 2014 Check: 00 .. Name: ENSP00000300051/1-507 Len: 532 Check: 3289 Weight: 1.00 Name: ENSBTAP00000008924/1-509 Len: 532 Check: 9947 Weight: 1.00 Name: ENSTTRP00000007337/1-505 Len: 532 Check: 6642 Weight: 1.00 Name: bmy_20387T0/1-484 Len: 532 Check: 546 Weight: 1.00 Name: BACU018192/1-473 Len: 532 Check: 3057 Weight: 1.00 // 1 50 ENSP00000300051/1-507 MARLLRSATW ELFPWRGYCS QKAKGELCRD FVEALKAVVG GSHVSTAAVV ENSBTAP00000008924/1-509 MAILLRPASW GLFSWRGYCS RGTQGRLSAG FVEALKAVVG SPHVSTAAVV ENSTTRP00000007337/1-505 MASLLRAATW GIFPWRGYCS RGTQGELSEG FVEALKAVVG SPHVTTAAVV bmy_20387T0/1-484 MASLLRAATW GMFPWRGYCS RGTQGELSEG FVEALKAVVG SPHVSTAAAV BACU018192/1-473 ---------- -MFPWRGYCS RRKQGELSEG FVEALKAVVG SPHVSTAAAV 51 100 ENSP00000300051/1-507 REQHGRDESV HRCEPPDAVV WPQNVEQVSR LAALCYRQGV PIIPFGTGTG ENSBTAP00000008924/1-509 REQHGHDESM HRCQPPDAVV WPQNVEQVSR LAALCYGQGV PIIPFGTGTG ENSTTRP00000007337/1-505 REQHGHDESM HRCQPPDAVV WPQNVEQVSR LAALCYGQGV PIIPFGSGTG bmy_20387T0/1-484 REQHGHDESM HRCQPPDAVV WPQNVEQVSR LAALCYGQGV PIIPFGSGTG BACU018192/1-473 REQHGHDESM HRCQPPDAVV WPQNVEQVSR LAALCYGQGV PIIPFGSGTG 101 150 ENSP00000300051/1-507 LEGGVCAVQG GVCVNLTHMD RILELNQEDF SVVVEPGVTR KALNAHLRDS ENSBTAP00000008924/1-509 LEGGVCAVQG GVCINLTRMD RILELNPEDF SVMVEPGVTR KALNTHLRDS ENSTTRP00000007337/1-505 LEGGVCAVQG GVCVNLTHMD RILELNQEDF SVVVEPGVTR KALNSHLRDS bmy_20387T0/1-484 LEGGVCAVQG GVCVNLTHMD RILELNPEDF SVVVEPGVTR KALNTHLRDS BACU018192/1-473 LEGGVCAVQG GVCVNLTHMD RILELNPEDF SVVVEPGVTR KALNTHLRDS 151 200 ENSP00000300051/1-507 GLWFPVDPGA DASLCGMAAT GASGTNAVRY GTMRDNVLNL EVVLPDGRLL ENSBTAP00000008924/1-509 GLWFPVDPGA DASLCGMAAT GASGTNSVRY GTMRDNVLNL EVVLPSGQRL ENSTTRP00000007337/1-505 GLWFPVDPGA DASLCGMVAT GASGTNAVRY GTMRDNVLNL EVVLPGGRLL bmy_20387T0/1-484 GLWFPVDPGA DASLCGMVAT AASGTNAVRY GTMRDNVLNL EVVLPGGRLL BACU018192/1-473 GLWFPVDPGA DASLCGMVAT GASGTNAVRY GTMRDNVLNL EVVLPGGRLL 201 250 ENSP00000300051/1-507 HTAGRGRHFR FGFWPEIPHH TAWYSPCVSL GRRKSAAGYN LTGLFVGSEG ENSBTAP00000008924/1-509 HTAGPGRRF- ---------- ---------- --RKSAAGYN LTGLFVGSEG ENSTTRP00000007337/1-505 HTAGPGRHFR -GFWPQIRRH VAWHLPH-PR GPRKSAAGYN LTGLFVGSEG bmy_20387T0/1-484 HTAGPGRHF- ---------- ---------- --RKSAAGYN LTGLFVGSEG BACU018192/1-473 HTAGPGRHF- ---------- ---------- --RKSAAGYN LTGLFVGSEG 251 300 ENSP00000300051/1-507 TLGLITATTL RLHPAPEATV AATCAFPSVQ AAVDSTVHIL QAAVPVARIE ENSBTAP00000008924/1-509 TLGLITAATL RLHPVPEATV AATCAFPTVQ AAVDSTVHIL QAAVPVARIE ENSTTRP00000007337/1-505 TLGLITAATL RLHPVPEATV AATCAFPSVQ AAVDSTVHIL QAAVPVARIE bmy_20387T0/1-484 TLGLITAATL HLHPAPEATV AATCAFPSVQ AAVDSTVHIL QAAVPVARIE BACU018192/1-473 TLGLITAATL RLHPAPEATV AATCAFPSVQ AAVDSTVHIL QAAVPVARIE 301 350 ENSP00000300051/1-507 FLDEVMMDAC NRYSKLNCLV APTLFLEFHG SQQALEEQLQ RTEEIVQQNG ENSBTAP00000008924/1-509 FLDEVMMDAC NRHSKLNCCV APTLFLEFHG SEQALAEQVQ RTEEIIRHNG ENSTTRP00000007337/1-505 FLDDVMMDAC NRHSKLNCCV APTLFLEFHG SEQALAEQVQ RTEEIIRHNG bmy_20387T0/1-484 FLDDVMMDAC NRYSKLNCCV APTLFLEFHG SEQALAEQVQ RTEEIIRHNG BACU018192/1-473 FLDDVMMDAC NRHSKLNCCV APALFLEFHG SEQALAEQVQ RTEEIIRHNG 351 400 ENSP00000300051/1-507 ASDFSWAKEA EERSRLWTAR HNAWYAALAT RPGCKGYSTD VCVPISRLPE ENSBTAP00000008924/1-509 GSHFSWAKEA EERSRLWAAR HNAWYASLAL RPGCKGYSTD VCVPISRLPE ENSTTRP00000007337/1-505 GSHFSWAKEA EDRSRLWAAR HNAWYAALAL RPGCKGYSTD VCVPISRLPE bmy_20387T0/1-484 GSHFSWAKEA EERSRLWAAR HNAWYAALAL RPGCKGYSTD VCVPISRLPE BACU018192/1-473 GSHFSWAKEA EERSRLWAAR HNAWYAALAL RPGCKGYSTD VCVPISRLPE 401 450 ENSP00000300051/1-507 IVVQTKEDLN ASGLTGSIVG HVGDGNFHCI LLVNPDDAEE LGRVKAFAEQ ENSBTAP00000008924/1-509 ILVQTKEDLE AWRLTGTIVG HVGDGNFHCI LLVDPEDPEE LLRVQAFAEQ ENSTTRP00000007337/1-505 ILVQTKEDLQ ASGLTGTIVG HVGDGNFHCI LVVDPEDHEE LLRVKAFAEQ bmy_20387T0/1-484 ILVQTKEDLQ ASGLTGTIVG HVGDGNFHCI LVVDPEDHEE LLRVKAFAEQ BACU018192/1-473 ILVQTKEDLQ ASGLTGTIVG HVGDGNFHCI LVVDPEDHEE LLRVKAFAEQ 451 500 ENSP00000300051/1-507 LGRRALALHG TCTGEHGIGM GKRQLLQEEV GAVGVETMRQ LKAVLDPQGL ENSBTAP00000008924/1-509 LGRRALALHG TCTGEHGIGL GKRQLLPEEV GAVGMETMRQ IKATLDPQGL ENSTTRP00000007337/1-505 LVRRALALRG TCTGEHGIGL GKRQLLQEEV GTVGIETMRQ LKAMLDPRGL bmy_20387T0/1-484 LVRRALALHG TCTGEHGIGL GKRLLLQEEV GTVGIETMRQ LKATLDPRGL BACU018192/1-473 LVRRALALHG TCTGEHGIGL GKRLLLQEEV GTVGIETMRQ LKATLDPRGL 501 550 ENSP00000300051/1-507 MNPGK----- VL-------- ---------- -- ENSBTAP00000008924/1-509 MNPGKPEEGT VLRLQEEGHF RGPRSLSQLL CP ENSTTRP00000007337/1-505 MNPGK----- VL-------- ---------- -- bmy_20387T0/1-484 MNPGK----- VL-------- ---------- -- BACU018192/1-473 MNPGK----- VL-------- ---------- --