KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:41 2014 Check: 00 .. Name: bmy_13605T0/1-138 Len: 253 Check: 641 Weight: 1.00 Name: ENSP00000309141/1-253 Len: 253 Check: 8352 Weight: 1.00 Name: BACU013043/1-253 Len: 253 Check: 8380 Weight: 1.00 Name: ENSTTRP00000012820/1-253 Len: 253 Check: 8000 Weight: 1.00 Name: ENSBTAP00000008938/1-253 Len: 253 Check: 7457 Weight: 1.00 // 1 50 bmy_13605T0/1-138 MTTSRCSHLP EVLPDCTSSA APVVKTVEDC GSLVNGQPQY VMQVSAKDGQ ENSP00000309141/1-253 MTTSRCSHLP EVLPDCTSSA APVVKTVEDC GSLVNGQPQY VMQVSAKDGQ BACU013043/1-253 MTTSRCSHLP EVLPDCTSST APVVKTVEDC GSLVNGQPQY VMQVSAKDGQ ENSTTRP00000012820/1-253 MTTSRCSHLP EVLPDCTSSA APVVKTVEDC GSLVNGQPQY VMQVSAKDGQ ENSBTAP00000008938/1-253 MTTSRCSHLP EVLPDCTGSA APVVKTVEDC GSLVNGQPQY VMQVSAKDGQ 51 100 bmy_13605T0/1-138 LLSTVVRTLA TQSPFNDRPM CRICHEGSSQ EDLLSPCECT GTLGTIHRSC ENSP00000309141/1-253 LLSTVVRTLA TQSPFNDRPM CRICHEGSSQ EDLLSPCECT GTLGTIHRSC BACU013043/1-253 LLSTVVRTLA TQSPFNDRPM CRICHEGSSQ EDLLSPCECT GTLGTIHRSC ENSTTRP00000012820/1-253 LLSTVVRTLA TQSPFNDRPM CRICHEGSSQ EDLLSPCECT GTLGTIHRSC ENSBTAP00000008938/1-253 LLSTVVRTLA TQSPFNDRPM CRICHEGSSQ EDLLSPCECT GTLGTIHRSC 101 150 bmy_13605T0/1-138 LEHWLSSSNT SYCELCHFRF AVERKPRPLV E--------- ---------- ENSP00000309141/1-253 LEHWLSSSNT SYCELCHFRF AVERKPRPLV EWLRNPGPQH EKRTLFGDMV BACU013043/1-253 LEHWLSSSNT SYCELCHFRF AVERKPRPLV EWLRNPGPQH EKRTLFGDMV ENSTTRP00000012820/1-253 LEHWLSSSNT SYCELCHFRF AVERKPRPLV EWLRNPGPQH EKRTLFGDMV ENSBTAP00000008938/1-253 LEHWLSSSNT SYCELCHFRF AVERKPRPLV EWLRNPGPQH EKRTLFGDMV 151 200 bmy_13605T0/1-138 ---------- VSNW----GT S--------- ---------- ---------- ENSP00000309141/1-253 CFLFITPLAT ISGWLCLRGA VDHLHFSSRL EAVGLIALTV ALFTIYLFWT BACU013043/1-253 CFLFITPLAT ISGWLCLRGA VDHLHFSSRL EAVGLIALTV ALFTIYLFWT ENSTTRP00000012820/1-253 CFLFITPLAT ISGWLCLRGA VDHLHFSSRL EAVGLIALTV ALFTIYLFWT ENSBTAP00000008938/1-253 CFLFITPLAT ISGWLCLRGA VDHLHFSSRL EAVGLIALTV ALFTIYLFWT 201 250 bmy_13605T0/1-138 ---------- ---------- ---------- ---------- ---------- ENSP00000309141/1-253 LVSFRYHCRL YNEWRRTNQR VILLIPKSVN VPSNQPSLLG LHSVKRNSKE BACU013043/1-253 LVSFRYHCRL YNEWRRTNQR VILLIPKSVN VPSNQKSLLG LHSVKRNSKE ENSTTRP00000012820/1-253 LVSFRYHCRL YNEWRRTNQR VILLIPKSVN VPSNQKSLLG LHSVKRNSKE ENSBTAP00000008938/1-253 LVSFRYHCRL YNEWRRTNQR VILLIPKSVN IPSNQQSLLG LHSAKRNSKE 251 300 bmy_13605T0/1-138 --- ENSP00000309141/1-253 TVV BACU013043/1-253 TIV ENSTTRP00000012820/1-253 TIV ENSBTAP00000008938/1-253 TIV