KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:36:41 2014 Check: 00 .. Name: bmy_16710T0/1-463 Len: 463 Check: 3682 Weight: 1.00 Name: ENSTTRP00000016246/1-420 Len: 463 Check: 5049 Weight: 1.00 Name: ENSP00000308452/1-432 Len: 463 Check: 8430 Weight: 1.00 Name: ENSBTAP00000008948/1-441 Len: 463 Check: 7896 Weight: 1.00 // 1 50 bmy_16710T0/1-463 MTTTNRQFFS SNSIKGSSGL GGGLCLTSRQ LSGSLGAGSC RLGSAGSLGN ENSTTRP00000016246/1-420 MTTSNRQFSS SNSIRGSSGL GGSSSLTSRQ LSGS------ -------LGN ENSP00000308452/1-432 MTTSIRQFTS SSSIKGSSGL GGGSSRTSCR LSGGLGAGSC RLGSAGGLGS ENSBTAP00000008948/1-441 MTTTIRHF-S SGSIKGSSGL AGGSSR-SCR VSGSLGGGSC RLGSAGGLGS 51 100 bmy_16710T0/1-463 ALGDGSYPSC YSFGSGGGYG SGGYGSGGYG SGGYGSGGYG SGGFGTCGYG ENSTTRP00000016246/1-420 ALGGGSYSGC YSFGSG---- ------GG-- ---------- --------YG ENSP00000308452/1-432 TLGGSSYSSC YSFGSG---- ------GG-- ---------- --------YG ENSBTAP00000008948/1-441 GLGGSSYSSC YSFGSGGSYG SGGYVSGG-- ---------- --------YG 101 150 bmy_16710T0/1-463 SGFGGGDGLL VGGEKATMQN LNDRLASYLD KVRALEEANT ELEVKIHNWY ENSTTRP00000016246/1-420 SGFGGGDALL GASEKATMQN LNDRLASYLE KVRALEEANT DLEVKIRDWY ENSP00000308452/1-432 SSFGGVDGLL AGGEKATMQN LNDRLASYLD KVRALEEANT ELEVKIRDWY ENSBTAP00000008948/1-441 GGFGGVDGLL VGGEKATMQN LNDRLASYLD KVRALEEANT ELELKIRDWY 151 200 bmy_16710T0/1-463 KKQAPGPAPD YCHYFKTIED LRNEILMATT HNANILLQID NARLAADDFC ENSTTRP00000016246/1-420 QKQTPGPTSD YSAYFKTIED LRNKILMATT DNANVLLQID NSRLAADDFR ENSP00000308452/1-432 QRQAPGPARD YSQYYRTIEE LQNKILTATV DNANILLQID NARLAADDFR ENSBTAP00000008948/1-441 QKQAPGPAPD YSSYFKTIED LRNKIHTATV DNANLLLQID NARLAADDFR 201 250 bmy_16710T0/1-463 TKFETEHALR VSVEADINGL RRVLDELTLA RADLEMQIEN LKEELAYLRK ENSTTRP00000016246/1-420 TKFETEQALR VSVESDINGL RRVLDELTLA RADLEMQIEN LKEELVYLRK ENSP00000308452/1-432 TKFETEQALR LSVEADINGL RRVLDELTLA RADLEMQIEN LKEELAYLKK ENSBTAP00000008948/1-441 TKFETEQALR VSVEADINGL RRVLDELTLA RADLEMQIEN LKEELAYLRK 251 300 bmy_16710T0/1-463 NHEEEMNALR GQVGGEINVE MDAAPGVDLS HILNEMRDQY EKMAEKNRKD ENSTTRP00000016246/1-420 NHEEEMKVLR GQVGGEINVE MDAAPGVDLS RILNEMREQY EKMAEKNRKD ENSP00000308452/1-432 NHEEEMNALR GQVGGEINVE MDAAPGVDLS RILNEMRDQY EKMAEKNRKD ENSBTAP00000008948/1-441 NHEEEMKALR GQVGGEINVE MDAAPGVDLS RILNEMRDQY EKMAEKNRKD 301 350 bmy_16710T0/1-463 AENWFFSKTE ELNREVTTHC ELVQSSKCEV SELRRTMQAL EIELQSQLSM ENSTTRP00000016246/1-420 AEDWFFSKTE ELNREVASNS EMVQSSKSEI SELRRTMQNL EIELQSHLSM ENSP00000308452/1-432 AEDWFFSKTE ELNREVATNS ELVQSGKSEI SELRRTMQAL EIELQSQLSM ENSBTAP00000008948/1-441 AEDWFFSKTE ELNREVATNS ELVQSGKSEI SELRRTLQAL EIELQSQLSM 351 400 bmy_16710T0/1-463 KASLEGSLAE TENRYCLQLG QIQGLICSVE EQLAQLRCET EQQSQEYKIL ENSTTRP00000016246/1-420 KASLENSLAE TENRYCLQLS QIQGLVGSVE EQLAQLRCEM GQQSQEYQIL ENSP00000308452/1-432 KASLEGNLAE TENRYCVQLS QIQGLIGSVE EQLAQLRCEM EQQNQEYKIL ENSBTAP00000008948/1-441 KASLEGSLAE TENRYCMQLS QIQGLIGSVE EQLAQLRCEM EQQNQEYKIL 401 450 bmy_16710T0/1-463 LDVKTRLEQE ISTYRCLLGG EDSQQTLHKL DEPVTTRQVR TIVEEVKDGR ENSTTRP00000016246/1-420 LDVKTRLEQE IATYRRLLEG EDAQLTLHKS REPVTTRQVR TIVEEVQDGR ENSP00000308452/1-432 LDVKTRLEQE IATYRRLLEG EDAHLTQYK- KEPVTTRQVR TIVEEVQDGK ENSBTAP00000008948/1-441 LDVKTRLEQE IATYRRLLEG EDAHLTQYKT KEPVTTRQVR TIVEEVQDGR 451 500 bmy_16710T0/1-463 VVSSHEQVHQ STH ENSTTRP00000016246/1-420 VISSREQVQQ SNI ENSP00000308452/1-432 VISSREQVHQ TTR ENSBTAP00000008948/1-441 VISSREQVHQ TSH