KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:36:42 2014 Check: 00 .. Name: ENSP00000264033/1-906 Len: 918 Check: 6357 Weight: 1.00 Name: ENSBTAP00000008961/1-900 Len: 918 Check: 3339 Weight: 1.00 Name: bmy_03240T0/1-520 Len: 918 Check: 8444 Weight: 1.00 Name: ENSTTRP00000005140/1-883 Len: 918 Check: 446 Weight: 1.00 // 1 50 ENSP00000264033/1-906 MAGNVKKSSG AGGGSGSGGS GSGGLIGLMK DAFQPHHHHH HHLSPHPPGT ENSBTAP00000008961/1-900 ---------- ------GGSG GSGGLIGLMK DAFQPHHHHH HHLSPHPPGT bmy_03240T0/1-520 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005140/1-883 ---------- ---------S GSGGLIGLMK DAFQPHHHHH HHLSPHPPGT 51 100 ENSP00000264033/1-906 VDKKMVEKCW KLMDKVVRLC QNPKLALKNS PPYILDLLPD TYQHLRTILS ENSBTAP00000008961/1-900 VDKKMVEKCW KLMDKVVRLC QNPKLALKNS PPYILDLLPD TYQHLRTILS bmy_03240T0/1-520 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005140/1-883 VDKKMVEKCW KLMDKVVRLC QNPKLALKNS PPYILDLLPD TYQHLRTILS 101 150 ENSP00000264033/1-906 RYEGKMETLG ENEYFRVFME NLMKKTKQTI SLFKEGKERM YEENSQPRRN ENSBTAP00000008961/1-900 RYEGKMETLG ENEYFRVFME NLMKKTKQTI SLFKEGKERM YEENSQPRRN bmy_03240T0/1-520 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005140/1-883 RYEGKMETLG ENEYFRVFME NLMKKTKQTI SLFKEGKERM YEENSQPRRN 151 200 ENSP00000264033/1-906 LTKLSLIFSH MLAELKGIFP SGLFQGDTFR ITKADAAEFW RKAFGEKTIV ENSBTAP00000008961/1-900 LTKLSLIFSH MLAELKGIFP SGLFQGDTFR ITKADAAEFW RKAFGEKTIV bmy_03240T0/1-520 ---------- MLAELKGIFP SGLFQGDTFR ITKADAAEFW RKAFGEKTIV ENSTTRP00000005140/1-883 LTKLSLIFSH MLAELKGIFP SGLFQGDTFR ITKADAAEFW RKAFGEKTIV 201 250 ENSP00000264033/1-906 PWKSFRQALH EVHPISSGLE AMALKSTIDL TCNDYISVFE FDIFTRLFQP ENSBTAP00000008961/1-900 PWKSFRQALH EVHPISSGLE AMALKSTIDL TCNDYISVFE FDIFTRLFQP bmy_03240T0/1-520 PWKSFRQALH EVHPISSGLE AMALKSTIDL TCNDYISVFE FDIFTRLFQP ENSTTRP00000005140/1-883 PWKSFRQALH EVHPISSGLE AMALKSTIDL TCNDYISVFE FDIFTRLFQP 251 300 ENSP00000264033/1-906 WSSLLRNWNS LAVTHPGYMA FLTYDEVKAR LQKFIHKPGS YIFRLSCTRL ENSBTAP00000008961/1-900 WSSLLRNWNS LAVTHPGYMA FLTYDEVKAR LQKFIHKPGS YIFRLSCTRL bmy_03240T0/1-520 WSSLLRNWNS LAVTHPGYMA FLTYDEVKAR LQKFIHKPGS YIFRLSCTRL ENSTTRP00000005140/1-883 WSSLLRNWNS LAVTHPGYMA FLTYDEVKAR LQKFIHKPGS YIFRLSCTRL 301 350 ENSP00000264033/1-906 GQWAIGYVTA DGNILQTIPH NKPLFQALID GFREGFYLFP DGRNQNPDLT ENSBTAP00000008961/1-900 GQWAIGYVTA DGNILQTIPH NKPLFQALID GFREGFYLFP DGRNQNPDLT bmy_03240T0/1-520 GQWAIGYVTA DGNILQTIPH NKPLFQALID GFREGFYLFP DGRNQNPDLT ENSTTRP00000005140/1-883 GQWAIGYVTA DGNILQTIPH NKPLFQALID GFREGFYLFP DGRNQNPDLT 351 400 ENSP00000264033/1-906 GLCEPTPQDH IKVTQEQYEL YCEMGSTFQL CKICAENDKD VKIEPCGHLM ENSBTAP00000008961/1-900 GLCEPTPQDH IKVTQEQYEL YCEMGSTFQL CKICAENDKD VKIEPCGHLM bmy_03240T0/1-520 GLCEPTPQDH IKVTQEQYEL YCEMGSTFQL CKICAENDKD VKIEPCGHLM ENSTTRP00000005140/1-883 GLCEPTPQDH IKVTQEQYEL YCEMGSTFQL CKICAENDKD VKIEPCGHLM 401 450 ENSP00000264033/1-906 CTSCLTSWQE SEGQGCPFCR CEIKGTEPIV VDPFDPRGSG SLLRQGAEGA ENSBTAP00000008961/1-900 CTSCLTSWQE SEGQGCPFCR CEIKGTEPIV VDPFDPRGSG SLLRQGAEGA bmy_03240T0/1-520 CTSCLTSWQE SEGQGCPFCR CEIKGTEPIV VDPFDPRGSG SLLRQGAEGA ENSTTRP00000005140/1-883 CTSCLTSWQE SEGQGCPFCR CEIKGTEPIV VDPFDPRGSG SLLRQGAEGA 451 500 ENSP00000264033/1-906 PSPNYDDDDD ERADDTLFMM KELAGAKVER PPSPFSMAPQ ASLPPVPPRL ENSBTAP00000008961/1-900 PSPNYEDDDD ERADDSLFMM KELAGAKVER PPSPFSMAPQ ASLPPVPPRL bmy_03240T0/1-520 PSPNYDDDDD ERADDSLFMM KELAGAKVER PPSPFSMAPQ ASLPPVPPRL ENSTTRP00000005140/1-883 PSPNYDDDDD ERADDSLFMM KELAGAKVER PPSPFSMAPQ ASLPPVPPRL 501 550 ENSP00000264033/1-906 DLLPQRVCVP SSASALGTAS KAASGSLHKD KPLPVPPTLR DLPPPPPPDR ENSBTAP00000008961/1-900 DLLQQRISIP SSASGLGTAS KAPSGSLHKD KPLPIPPTLR DLPPPPPPDR bmy_03240T0/1-520 DLLQQRISIP SSASGLGTAS KAPSGSLHKD KPLPIPPTLR DLPPPPPPDR ENSTTRP00000005140/1-883 DLLQQRISIP SSASGLGTAS KAPSGSLHKD KPLPIPPTLR DLPPPPPPDR 551 600 ENSP00000264033/1-906 PYSVGAESRP QRRPLPCTPG DCPSRDKLPP VPSSRLGD-S WLPRPIPKVP ENSBTAP00000008961/1-900 PYSGGAETRP QRRPLPCTPG DCPSRDKLPP VPSGRIGEAS WLHRPIPKVP bmy_03240T0/1-520 PYSGGAETRP QRRPLPCTPG DCPSRDKLPP VPSGRAGEAS WLPRPIPKVP ENSTTRP00000005140/1-883 PYSGGAETRP QRRPLPCTPG DCPSRDKLPP VPSGRAGEAS WLPRPIPKVP 601 650 ENSP00000264033/1-906 VSAPSSSDPW TGRELTNRHS LPFSLPSQME PRPDVPRLGS TFSLDTSMSM ENSBTAP00000008961/1-900 VVAPNPSDPW TGRELTNRHS LPFSLPSQME PRTDTPRLGS TFNLDTSMNM bmy_03240T0/1-520 VVAPNPSDPW TGRELTNRHS LPFSLPSQME PRTDVPRLGS TFSLETSMNM ENSTTRP00000005140/1-883 VVAPNPSDPW TGRELTNRHS LPFSLPSQME PRTDVPRLGS TFSLDTSMNT 651 700 ENSP00000264033/1-906 NSSPLVGPEC DHPKIKPSSS ANAIYSLAAR PLPVPKLPPG EQCEGEEDTE ENSBTAP00000008961/1-900 NSSPLAGAEC EHPKIKPSAS ANAIYSLAAR PLPVPKLPPG EQCESEEDTE bmy_03240T0/1-520 NSSPLAGPEC EHPKIKPSAS ANAIYSLAAR ---------- ---------- ENSTTRP00000005140/1-883 NSSPLAGPEC EHPKIKPSAS ANAIYSLAAR PLPVPKPPPG EQCESEEDTE 701 750 ENSP00000264033/1-906 YMTPSSRPL- -------RPL DTSQSSRA-- CDCDQQIDSC TYEAMYNIQS ENSBTAP00000008961/1-900 YMTPSSRPVG LQKPDVKWPP EIAQSSRSRT CDCDQQIDSC TYEAMYNIQS bmy_03240T0/1-520 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005140/1-883 YMTPSSRPV- -------WPL ETTQSSRA-- CDCNQQIDSC TYEAMYNIQS 751 800 ENSP00000264033/1-906 Q-APSITESS TFGEGNLAAA HANTGPEESE NEDDGYDVPK PPVPAVLARR ENSBTAP00000008961/1-900 QVAPSVTESG TFGEGNLAAA HANTGPEESE NEEDGYDVPK PPVPAVLARR bmy_03240T0/1-520 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005140/1-883 QAAPSVTESG TFGEGNLAAA HANTGPEESE NEDDGYDVPK PPVPAVLARR 801 850 ENSP00000264033/1-906 TLSDISNASS SFGWLSLDGD PTTNVTEGSQ VPERPPKPFP RRINSERKAG ENSBTAP00000008961/1-900 TLSDISNASS SFGWLSLEGD PPTHFTESAQ VPERPPKPFP RRINSERKAG bmy_03240T0/1-520 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005140/1-883 TLSDISNASS SFGWLSLEGD PTTNFAEGSQ VPERPPKPFP RRINSERKAG 851 900 ENSP00000264033/1-906 SCQQGSGPAA SAATASPQLS SEIENLMSQG YSYQDIQKAL VIAQNNIEMA ENSBTAP00000008961/1-900 SCQQSS--AA ASAAASPQLS SEIESLLSQG YSYQDIQKAL VIAHNNIEMA bmy_03240T0/1-520 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005140/1-883 SCQQST---- --AATSPQLS SEIESLMSQG YSYQDIQKAL VIAHNNIEMA 901 950 ENSP00000264033/1-906 KNILREFVSI SSPAHVAT ENSBTAP00000008961/1-900 KNILREFVSI SSPAHVAT bmy_03240T0/1-520 ---------- -------- ENSTTRP00000005140/1-883 KNILREFVSI SSPAHVAT