KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:54 2014 Check: 00 .. Name: bmy_18805T0/1-874 Len: 924 Check: 865 Weight: 1.00 Name: ENSP00000395708/1-923 Len: 924 Check: 5428 Weight: 1.00 Name: ENSBTAP00000008976/1-923 Len: 924 Check: 7449 Weight: 1.00 Name: BACU019969/1-923 Len: 924 Check: 7036 Weight: 1.00 Name: ENSTTRP00000011933/1-923 Len: 924 Check: 4889 Weight: 1.00 // 1 50 bmy_18805T0/1-874 MKVGWPGESR WQVGLAVEDS SVLGAPPVGG LPDVVPEGTL LNMVLRRMHR ENSP00000395708/1-923 MKVGWPGESC WQVGLAVEDS PALGAPRVGA LPDVVPEGTL LNMVLRRMHR ENSBTAP00000008976/1-923 MKVGWPGEGR WQVGLAVEGD SILGAPPLGG LPDVVPEGTL LNMVLRRMYR BACU019969/1-923 -QVGWPGESR WQVGLAVEDS SVLGAPPVGG LPDVVPEGTL LSMVLRRMHR ENSTTRP00000011933/1-923 MKVSWPGESR WQVGLAVEDS SVLGAPPVGG LPDVVPEGTL FNMVLRRMHR 51 100 bmy_18805T0/1-874 SRSCSYQLLL EHQRPSCIQG LRWTPLTNSE ESLDFSVSLE QASTERVLRA ENSP00000395708/1-923 PRSCSYQLLL EHQRPSCIQG LRWTPLTNSE ESLDFSESLE QASTERVLRA ENSBTAP00000008976/1-923 SRSCSYQLLL EHQRPSCIQG LRWTPLTSSE ESLDFSVSLE QASAERVLRA BACU019969/1-923 SRSCSYQLLL EHQRPSCIQG LRWTPLTNSE ESLDFSVSLE QASTERVLRA ENSTTRP00000011933/1-923 SRSCSYQLLL EHQRPSCIQG LRWTPLANSE ESLDFSVSLE QASTERVLRA 101 150 bmy_18805T0/1-874 GKQLHRHLLA TCPNLIRDRK YHLRLHRQCC SGRELVDGIL ALGLGVHSRS ENSP00000395708/1-923 GRQLHRHLLA TCPNLIRDRK YHLRLYRQCC SGRELVDGIL ALGLGVHSRS ENSBTAP00000008976/1-923 GKQLHRHLLA NCPNLIRDRK YHLRLHRQCC SGRELVDGIL ALGLGVHSRS BACU019969/1-923 GKQLHRHLLA TCPNLIRDRK YHLRLHRQCC SGRELVDGIL ALGLGVHSRS ENSTTRP00000011933/1-923 GRQLHRHLLA TCPNLIRDRK YHLRLHRQCC SGRELVDGIL ALGLGVHSRS 151 200 bmy_18805T0/1-874 QAVGICQVLL DEGALCHVKH DWAFQDRDTQ FYRFPGSEPE PAGIHELEEE ENSP00000395708/1-923 QVVGICQVLL DEGALCHVKH DWAFQDRDAQ FYRFPGPEPE PVRTHEMEEE ENSBTAP00000008976/1-923 QAVGICQVLL DEGALCHVKH DWAFQDRDTQ FYRFPGPEPE PVGVHELEEE BACU019969/1-923 QAVGICQVLL DEGALCHVKH DWAFQDRDTQ FYRFPGSEPE PAGIHELEEE ENSTTRP00000011933/1-923 QAVGICQVLL DEGALCHVKH DWAFQDRDTQ FYRFPGPEPE PAGLHELEEE 201 250 bmy_18805T0/1-874 LAEALALLSQ RGPDALLTVA LRKPPGQRTD EELDLIFEEL LHIKAVAHLS ENSP00000395708/1-923 LAEAVALLSQ RGPDALLTVA LRKPPGQRTD EELDLIFEEL LHIKAVAHLS ENSBTAP00000008976/1-923 LVEALALLSQ RGPDALLTVA LRKPPGQRTD EELDLIFEEL LHIKAVAHLS BACU019969/1-923 LAEALALLSQ RGPDALLTVA LRKPPGQRTD EELDLIFEEL LHIKAVAHLS ENSTTRP00000011933/1-923 LVEALALLSQ RGPDALLTVA LRKPPGQRTD EELDLIFEEL LHIKAVAHLS 251 300 bmy_18805T0/1-874 NSVKRELAAV LLFEPHSKAG TVLFSQGDKG TSWYIIWKGS VNVVTHGKGL ENSP00000395708/1-923 NSVKRELAAV LLFEPHSKAG TVLFSQGDKG TSWYIIWKGS VNVVTHGKGL ENSBTAP00000008976/1-923 NSVKRELAAV LLFEPHSKAG TVLFSQGDKG TSWYIIWKGS VNVVTHGKGL BACU019969/1-923 NSVKRELAAV LLFEPHSKAG TVLFSQGDKG TSWYIIWKGS VNVVTHGKGL ENSTTRP00000011933/1-923 NSVKRELAAV LLFEPHSKAG TVLFSQGDKG TSWYIIWKGS VNVVTHGKGL 301 350 bmy_18805T0/1-874 VTTLHEGDDF GQLALVNDAP RAATIILRED NCHFLRVDKQ DFNRIIKDVE ENSP00000395708/1-923 VTTLHEGDDF GQLALVNDAP RAATIILRED NCHFLRVDKQ DFNRIIKDVE ENSBTAP00000008976/1-923 VTTLHEGDDF GQLALVNDAP RAATIILGED NCHFLRVDKQ DFNRIIKDVE BACU019969/1-923 VTTLHEGDDF GQLALVNDAP RAATIILRED NCHFLRVDKQ DFNRIIKDVE ENSTTRP00000011933/1-923 VTTVHEGDDF GQLALVNDAP RAATIILRED NCHFLRVDKQ DFNRIIKDVE 351 400 bmy_18805T0/1-874 AKTMRLEEHG KVVLVLERTS QGTGPSRPPT PGRNRYIVMS GTPEKILELL ENSP00000395708/1-923 AKTMRLEEHG KVVLVLERAS QGAGPSRPPT PGRNRYTVMS GTPEKILELL ENSBTAP00000008976/1-923 AKTMRLEEHG KVVLVLERTS QGTGPSRPPT PGRNRYTVMS GTPEKILELL BACU019969/1-923 AKTMRLEEHG KVVLVLERTS QGTGPSRPPT PGRNRYIVMS GTPEKILELL ENSTTRP00000011933/1-923 AKTMRLEEHG KVVLVLERTS QGTGPSRPPT PGRNRYIVMS GTPEKILELL 401 450 bmy_18805T0/1-874 LEAMRPDSSA HDPTETFLSD FLLTHSVFMP TAQLCAALLH HFHAEPAG-G ENSP00000395708/1-923 LEAMGPDSSA HDPTETFLSD FLLTHRVFMP SAQLCAALLH HFHVEPAG-G ENSBTAP00000008976/1-923 LEAMRPDSSA HDPTETFLSD FLLTHSVFMP TAQLCAALLH HFHAEPAG-G BACU019969/1-923 LEAMRPDSSA HDPTETFLSD FLLTHSVFMP TAQLCAALLH QYPSSPRGDG ENSTTRP00000011933/1-923 LEAMRPDSSA HDPTETFLSD FLLTHSVFMP TAQLCAALLH HFHAEPMG-G 451 500 bmy_18805T0/1-874 SEQECSTYIC NKRQQILRLV SQWVALYGPM LHTDTVATSF LQKLSDLVSR ENSP00000395708/1-923 SEQERSTYVC NKRQQILRLV SQWVALYGSM LHTDPVATSF LQKLSDLVGR ENSBTAP00000008976/1-923 SEQERSSYIC NKRQQILRLV SQWVTLYGPT LRTDPVATSF LKKLSDLVSR BACU019969/1-923 SEQECSTYIC NRRQQILRLV SQWVALYGPM LHTDTVATSF LQKLSDLVSR ENSTTRP00000011933/1-923 SEQECSTYIC NKRQQILRLV SQWVALYGPM LHTDPVATSF LQKLSDLVSR 501 550 bmy_18805T0/1-874 DARLSNLLRE QWPERRRHHR LENGCGNASP QMKARNMPVW LPSQDEPLPS ENSP00000395708/1-923 DTRLSNLLRE QWPERRRCHR LENGCGNASP QMKARNLPVW LPNQDEPLPG ENSBTAP00000008976/1-923 DTRLSNLLRE QWPERRRHHR LENGCGNVSP QMKARNVPVW LPSQDEPLPS BACU019969/1-923 DARLSNLLRE QWPERRRHHR LENGCGNASP QMKARNMPVW LPSQDEPLPS ENSTTRP00000011933/1-923 DARLCNLLRE QWPERRRHHR LENGCGNASP QMKARNMPVW LPSQDEPLPS 551 600 bmy_18805T0/1-874 SNCAIRVGDK VPYDICRPDH SVLTLQLPVT ASVREVMAAL AQEDSWTKGQ ENSP00000395708/1-923 SSCAIQVGDK VPYDICRPDH SVLTLQLPVT ASVREVMAAL AQEDGWTKGQ ENSBTAP00000008976/1-923 SNCAIRVGDK VPYDICRPDH SMLTLQLPVT ASVREVMAAL AQEDGWTKGQ BACU019969/1-923 SNCAIRVGDK VPYDICRPDH SVLTLQLPVT ASVREVMAAL AQEDGWTKGQ ENSTTRP00000011933/1-923 SNCAIRVGDK VPYDICRLDH SVLTLQLPVT ASVREVMAAL AQEDGWTKGQ 601 650 bmy_18805T0/1-874 VLVKVNSAGD AVGLQPDARG VATSLGLNER LFVVSPQEVH KLTPHPEQLG ENSP00000395708/1-923 VLVKVNSAGD AIGLQPDARG VATSLGLNER LFVVNPQEVH ELIPHPDQLG ENSBTAP00000008976/1-923 VLVKVNSAGD AIGLQPDARG VATSLGLNER LFVVNPQEVH ELTPHPDQLG BACU019969/1-923 VLVKVNSAGD AVGLQPDARG VAASLGLNER LFVVSPQEVH KLTPHPEQLG ENSTTRP00000011933/1-923 VLVKVNSAGD TVGLQPDAHG VATSLGLNER LFVVNPQEVH KLTPHPEQLG 651 700 bmy_18805T0/1-874 PTVGSAEGLD LVSTKDLAGQ LTDHDWSLFN SIHQVELIHY VLGPQPLRDV ENSP00000395708/1-923 PTVGSAEGLD LVSAKDLAGQ LTDHDWSLFN SIHQVELIHY VLGPQHLRDV ENSBTAP00000008976/1-923 PTVGSAEGLD LVSTKDLAGQ LTDHDWSLFN SIHQVELIHY VLGPQHLRDV BACU019969/1-923 PAVGSAEGLD LVSTKDLAGQ LTDHDWSLFN SIHQVELIHY VLGPQPLRDV ENSTTRP00000011933/1-923 PTVGSAEGLD LVSTKDLAGQ LTDHDWSLFN SIHQVELIHY VLGPQPLRDV 701 750 bmy_18805T0/1-874 TTANLERFMR RFNELQYWVA TELCLCPVPG LRAQLLRKFI KLAAHLKEQK ENSP00000395708/1-923 TTANLERFMR RFNELQYWVA TELCLCPVPG PRAQLLRKFI KLAAHLKEQK ENSBTAP00000008976/1-923 TTANLERFMR RFNELQYWVA TELCLCSVPG LRAQLLRKFI KLAAHLKEQK BACU019969/1-923 TTANLERFMR RFNELQYWVA TELCLCPVPG LRAQLLRKFI KLAAHLKEQK ENSTTRP00000011933/1-923 TTANLERFMR RFNELQYWVA TELCLCPVPG LRAQLLRKFI KLAAHLKEQK 751 800 bmy_18805T0/1-874 NLNSFFAIMF GLSNSSISRL AQTWERLPHK VRKLYSALER LLDPSWNHRV ENSP00000395708/1-923 NLNSFFAVMF GLSNSAISRL AHTWERLPHK VRKLYSALER LLDPSWNHRV ENSBTAP00000008976/1-923 NLNSFFAIMF GLSNSAISRL AHTWERLPHK VRKLYSALER LLDPSWNHRV BACU019969/1-923 NLNSFFAIMF GLSNSAISRL AQTWERLPHK VRKLYSALER LLDPSWNHRV ENSTTRP00000011933/1-923 NLNSFFAIMF GLSNSAISRL AQTWERLPHK VRKLYSALER LLDPSWNHRV 801 850 bmy_18805T0/1-874 YRLALTKLSP PLIPFMPLLL K-------GK RTSI------ ---------- ENSP00000395708/1-923 YRLALAKLSP PVIPFMPLLL KDMTFIHEGN HTLVENLINF EKMRMMARAA ENSBTAP00000008976/1-923 YRLALTKLSP PLIPFMPLLL KDMTFIHEGN HTLVENLINF EKMRMMARAA BACU019969/1-923 YRLALTKLSP PLIPFMPLLL KDMTFIHEGN HTLVENLINF EKMRMMARAA ENSTTRP00000011933/1-923 YRLALTKLSP PLIPFMPLLL KDMTFIHEGN HTLVENLINF EKMRMMARAA 851 900 bmy_18805T0/1-874 --------HL PFSIPSIPAP V--------- -----CPSDP LSDSSVLVPW ENSP00000395708/1-923 RMLHHCRSHN PVPLSPLRSR VSHLHEDSQV ARISTCSEQS LSTRSPASTW ENSBTAP00000008976/1-923 RMLHHCRSHS NVPLSPLRSR VSHLHEDSQA VRVSTCSEQS LSTRSPASTW BACU019969/1-923 RMLHHCRSHS SVPLSPLRSR VSHLHEDSQA TRISMCSEQS LSTRSPASTW ENSTTRP00000011933/1-923 RMLHHCRSHS NVPLSPLRSR VSHLHEDSQA ARISTCSEQS LSTRSPASTW 901 950 bmy_18805T0/1-874 GTQRGTRS-S QGRSRVKTCR H--- ENSP00000395708/1-923 AYVQQLKVID NQRELSRLSR ELEP ENSBTAP00000008976/1-923 AYVQQLKVID NQRELSRLSR ELEP BACU019969/1-923 AYVQQLKVID NQRELSRLSR ELEP ENSTTRP00000011933/1-923 AYVQQLKVID NQRELSRLSR ELEP