KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:36:56 2014 Check: 00 .. Name: ENSP00000373860/1-283 Len: 287 Check: 3360 Weight: 1.00 Name: ENSBTAP00000008986/1-287 Len: 287 Check: 8869 Weight: 1.00 Name: bmy_14012T0/1-284 Len: 287 Check: 7799 Weight: 1.00 Name: ENSTTRP00000002070/1-278 Len: 287 Check: 3319 Weight: 1.00 // 1 50 ENSP00000373860/1-283 ----MADRGP WRVGVVGYGR LGQSLVSRLL AQGPELGLEL VFVWNRDPGR ENSBTAP00000008986/1-287 FKGMALDRVP RKVGIVGYGR LGQSLVSHLL TQGPELGLEL VFVWNRDPGR bmy_14012T0/1-284 ---MALTTVP RKVGIVGYGR VGQSLVSHLL TQGPELGLEL VFVWNRDPGR ENSTTRP00000002070/1-278 ---------P RKVGVLGYGR LGQSLVSHLL TQGPELGLEL VFVWNRDPGR 51 100 ENSP00000373860/1-283 MAGSVPPSLQ LQNLAALGER RPDLVVEVAH PKIIHESGAQ ILRHANLLVG ENSBTAP00000008986/1-287 MAGSIPPSLQ LQNLAALGER HPDLVVEVAH PKIIQESGAE ILRYANLLVG bmy_14012T0/1-284 MAGSVPPTLQ LQNLAALGER HPDLVVEVAH PKIIHESGAE ILRYANLLVG ENSTTRP00000002070/1-278 MAGSVPPTLQ LQNLAALGER HPDLVVEVAH PKIIHESGAE ILRYANLLVG 101 150 ENSP00000373860/1-283 SPSALSDQTT ERQLLEASQH WDHAVFVARG ALWGAEDIRR LDAAGGLRSL ENSBTAP00000008986/1-287 SPSALADQAT ERQLLEASHR WGHAVFVARG ALWGAEDITR LDEAGGLQSL bmy_14012T0/1-284 SPSALADQAT ERQLLEASHR WGHAVFVARG ALWGTEDIAR LDEAGGLQSL ENSTTRP00000002070/1-278 SPSALADQAT ERQLLEASHC WGHAVFVARG ALWGTEDIAR LDEAGGLQSL 151 200 ENSP00000373860/1-283 RVTMATHPDG FRLEGPLAAA HSPGPCTVLY EGPVRGLCPF APRNSNTMAA ENSBTAP00000008986/1-287 RVTMATHPDG FRLEGPLATM RSTGPRAVLY EGPVRGLCPH APRNSNTMAA bmy_14012T0/1-284 RVTMATHPDG FRLEGPLATV HSPGPRTVLY EGPVRGLCPL APRNSNTMAA ENSTTRP00000002070/1-278 RVTMATHPDG FRLEGPLATA HSTGPRTVLY EGPVRGLCPL APRNSNTMAA 201 250 ENSP00000373860/1-283 AALAAPSLGF DGVIGVLVAD TSLTDMHVVD VELSGPRGPT GRSFAVHTRR ENSBTAP00000008986/1-287 AALAAPSLGF DRVIGVLVAD FSLKNMHVVD VELSGPPGPT GQSFAVHTHR bmy_14012T0/1-284 AALAAPGLGF DRVIGVLVAD FSLKDMHVVD VELSGPPGPT GRSFAVHTHR ENSTTRP00000002070/1-278 AALAAPSLGF DRVIGVLVAD FSLKDMHVVD VELSGPPGPK GRSFAVHTHR 251 300 ENSP00000373860/1-283 ENPAEPGAVT GSATVTAFWQ SLLACCQLPS RPGIHLC ENSBTAP00000008986/1-287 ENPAEPGAVT GSATVTTFWR SLVGCCQLPS KPGIHLC bmy_14012T0/1-284 ENPTEPGAVT GSATITTFWR SLLGCCHLPS KPGIHLC ENSTTRP00000002070/1-278 ENPSEPGAVT GSATITTFWR SLLGCCHLPS KPGIHLC