KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:57 2014 Check: 00 .. Name: ENSTTRP00000003641/1-613 Len: 614 Check: 925 Weight: 1.00 Name: ENSP00000287295/1-613 Len: 614 Check: 8064 Weight: 1.00 Name: ENSBTAP00000008987/1-613 Len: 614 Check: 184 Weight: 1.00 Name: bmy_16249T0/1-544 Len: 614 Check: 1951 Weight: 1.00 Name: BACU008842/1-553 Len: 614 Check: 8209 Weight: 1.00 // 1 50 ENSTTRP00000003641/1-613 MYRCGGLAAG ALKHKLAPLV RTVCVRGPRQ RNRLPGN-LF QRWHVPLELQ ENSP00000287295/1-613 MFRCGGLAAG ALKQKLVPLV RTVCVRSPRQ RNRLPGN-LF QRWHVPLELQ ENSBTAP00000008987/1-613 MFRCGGLAAG ALKQKLAPLV RTVCVRGPRQ RNRLPGN-LF QRWHVPLELQ bmy_16249T0/1-544 MYRCGGLAAG ALKQKLAPLV RTVCVRGPRQ RNRLPGNXLF QRWHVPLELQ BACU008842/1-553 MYRCGGLAAG ALKQKLTPLV RTVCVRGPRQ RNRLPGNNLF QRWHVPLELQ 51 100 ENSTTRP00000003641/1-613 MTRQMTSSGA SGGKIDNSVL VLIVGLSTIG AGAYVYKTIK KDEKRYNERI ENSP00000287295/1-613 MTRQMASSGA SGGKIDNSVL VLIVGLSTVG AGAYAYKTMK EDEKRYNERI ENSBTAP00000008987/1-613 MTRQMASSGP SGGKIDNSVL VLIVGLSTIG AGAYAYKTIK DDKKRYNERI bmy_16249T0/1-544 MTRQMTSSGA SGGKIDNSVL VLIVGLSTIG AGAYAYKTIK DDQKRYNERI BACU008842/1-553 MTRQMTSSGA SGGKIDNSVL VLIVGLSTIG AGAYAYKTIK DDQKRYNERI 101 150 ENSTTRP00000003641/1-613 SGLGLTPEEK QKRATSSAAE GEPVPEFRVP SHIPFLLIGG GTAAFAAARS ENSP00000287295/1-613 SGLGLTPEQK QKKAALSASE GEEVPQDKAP SHVPFLLIGG GTAAFAAARS ENSBTAP00000008987/1-613 SGLGLTPEEK QKRATSSALE GEPEPQVRIP SHVPFLLIGG GTAAFAAARS bmy_16249T0/1-544 SGLGLTPEEK QKRATSSAPE GEPVPEVRVP SHIPFLLIGG GTAAFAAARS BACU008842/1-553 SGLGLTPEEK QKRATSSAPE GEPVPEVRVP SHIP------ ---------- 151 200 ENSTTRP00000003641/1-613 IRARDPGARV LIVSEDPELP YMRPPLSKEL WFSDDPNVTK TLRFKQWNGK ENSP00000287295/1-613 IRARDPGARV LIVSEDPELP YMRPPLSKEL WFSDDPNVTK TLRFKQWNGK ENSBTAP00000008987/1-613 IRARDPGARV LIVSEDPELP YMRPPLSKEL WFSDDPNVTK TLRFKQWNGK bmy_16249T0/1-544 IRARDPGARV LIISEDPELP YMRPPLSKEL WFSDDPNVTK TLRFKQWNGK BACU008842/1-553 ---------V LIVSEDPELP YMRPPLSKEL WFSDDPNVTK TLRFKQWNGK 201 250 ENSTTRP00000003641/1-613 ERSIYFQPPS FYVSAQELPH IENGGVAVLT GKKXXXXXXX XXXXXXXXXX ENSP00000287295/1-613 ERSIYFQPPS FYVSAQDLPH IENGGVAVLT GKKVVQLDVR DNMVKLNDGS ENSBTAP00000008987/1-613 ERSIYFQPPS FYVSAQDLPR VENGGVAVLT GKKVVQLDVR GNVAKLNDGS bmy_16249T0/1-544 ERSIYFQPPS FYVSAQELPH IENGGVAVLT GK-------- ---------- BACU008842/1-553 ERSIYFQPPS FYVSAQELPH IENGGVAVLT GKKVVQLDVR GNVAKLNDGS 251 300 ENSTTRP00000003641/1-613 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000287295/1-613 QITYEKCLIA TGGTPRSLSA IDRAGAEVKS RTTLFRKIGD FRSLEKISRE ENSBTAP00000008987/1-613 QITYEKCLIA TGGTPRSLSA IDRAGAEVKS RTTLFRKIED FRTLEKISRE bmy_16249T0/1-544 -----KCLIA TGGTPRSLSA IDRAGAE--- -------IGD FRTLEKISRE BACU008842/1-553 QITYEKCLIA TGGTPRSLSA IDRAGAEVKS RTTLFRKIGD FRTLEKISRE 301 350 ENSTTRP00000003641/1-613 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000287295/1-613 VKSITIIGGG FLGSELACAL GRKARALGTE VIQLFPEKGN MGKILPEYLS ENSBTAP00000008987/1-613 VKSITIIGGG FLGSELACAL GRKARASGTE VIQLFPEKGN MGKVLPEYLS bmy_16249T0/1-544 VKSITIIGGG FLGSELACAL GRKARASGTE VIQLFPEKGN MGKILPEYLS BACU008842/1-553 VKSITIIGGG FLGSELACAL GRK------- ---------- ---------- 351 400 ENSTTRP00000003641/1-613 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000287295/1-613 NWTMEKVRRE GVKVMPNAIV QSVGVSSGKL LIKLKDGRKV ETDHIVAAVG ENSBTAP00000008987/1-613 NWTMEKVRRE GVKVLPSAIV QSVGVSAGRL LIKLKDGRKV ETDHIVAAVG bmy_16249T0/1-544 NWTMEKVRQE GVKVLPSAIV QSVGVSGGRL LIKLKDGRKV ETDHIVAAVG BACU008842/1-553 ---------E GVKVLPSAIV QSVGVSGGRL LIKLKDGRKV ETDHIVAAVG 401 450 ENSTTRP00000003641/1-613 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXAGDA ACFYDIKLGR ENSP00000287295/1-613 LEPNVELAKT GGLEIDSDFG GFRVNAELQA RSNIWVAGDA ACFYDIKLGR ENSBTAP00000008987/1-613 LEPNVELAKT GGLEIDSDFG GFRVNAELQA RSNIWVAGDA ACFYDIKLGR bmy_16249T0/1-544 LEPNVELAKT GGLEIDSDFG GFRVNAELQA RSNIWVAGDA ACFYDIK--- BACU008842/1-553 LEPNVELAKT GGLEIDSDFG GFRVNAELQA RSNIWVAGDA ACFYDIKLGR 451 500 ENSTTRP00000003641/1-613 RRVEHHDHAV VXXXXXXXXX XXXXXXXXXX XXXXSDLGPD VGYEAIGLVD ENSP00000287295/1-613 RRVEHHDHAV VSGRLAGENM TGAAKPYWHQ SMFWSDLGPD VGYEAIGLVD ENSBTAP00000008987/1-613 RRVEHHDHAV VSGRLAGENM TGAAKPYWHQ SMFWSDLGPD VGYEAIGLVD bmy_16249T0/1-544 ---------- ---------- ---------- ----SDLGPD VGYEAIGLVD BACU008842/1-553 RRVEHHDHAV VSGRLAGENM TGAAKPYWHQ SMFWSDLGPD VGYEAIGLVD 501 550 ENSTTRP00000003641/1-613 SSLPTVGVFA KATAQDNPKS ATEQSGTGIR SESETESEAS EITLPPSNPV ENSP00000287295/1-613 SSLPTVGVFA KATAQDNPKS ATEQSGTGIR SESETESEAS EITIPPSTPA ENSBTAP00000008987/1-613 SSLPTVGVFA KATAQDNPKS ATEQSGTGIR SESETESEAS DIPVPPSNPA bmy_16249T0/1-544 SSLPTVGVFA KATAQDNPKS ATEQSGTGIR SESETESEAS EITLPPSNPV BACU008842/1-553 SSLPTVGVFA KATAQDNPKS ATEQSGTGIR SESETESEAS EITLPPSNPV 551 600 ENSTTRP00000003641/1-613 GLQAPAQGED YGKGVIFYLR DKVVVGIVLW NIFNRMPIAR KIIKDGEEHE ENSP00000287295/1-613 VPQAPVQGED YGKGVIFYLR DKVVVGIVLW NIFNRMPIAR KIIKDGEQHE ENSBTAP00000008987/1-613 VPQVPTQGED YGKGVIFYLR DKVVVGIVLW NIFNRMPIAR KIIKDGEQHE bmy_16249T0/1-544 VPQAPAQGED YGKGVIFYLR DKVVVGIVLW NIFNRMPIAR KIIKDGEEHE BACU008842/1-553 VPQAPAQGED YGKGIIFYLR DKVVVGIVLW NIFNRMPIAR KIIKDGEEHE 601 650 ENSTTRP00000003641/1-613 DLNEVAKLFN IHED ENSP00000287295/1-613 DLNEVAKLFN IHED ENSBTAP00000008987/1-613 DLNEVAKLFN IHED bmy_16249T0/1-544 DLNEVAKLFN IHED BACU008842/1-553 DLNEVAKLFN IHED