KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:36:57 2014 Check: 00 .. Name: ENSTTRP00000007673/1-396 Len: 422 Check: 9461 Weight: 1.00 Name: bmy_15291T0/1-326 Len: 422 Check: 5907 Weight: 1.00 Name: ENSP00000265165/1-399 Len: 422 Check: 6754 Weight: 1.00 Name: ENSBTAP00000008991/1-399 Len: 422 Check: 7663 Weight: 1.00 Name: BACU014396/1-371 Len: 422 Check: 1965 Weight: 1.00 // 1 50 ENSTTRP00000007673/1-396 MPQLSGAGGG GGGDPELCAT DEMIPFKDEG DPQKEKIFAE ISHPEEEGDL bmy_15291T0/1-326 MIQLSRSG-- ---------- ---------- ---------- ---------- ENSP00000265165/1-399 MPQLSGGGGG GGGDPELCAT DEMIPFKDEG DPQKEKIFAE ISHPEEEGDL ENSBTAP00000008991/1-399 MPQLSGAGGG GGGDPELCAT DEMIPFKDEG DPQKEKIFAE ISHPEEEGDL BACU014396/1-371 MPQLSGAGGG GGGDPELCAT DEMIPFKDEG DPQKEKIFAK ISHPEEEGDL 51 100 ENSTTRP00000007673/1-396 ADIKSSLVNE SEIIPASNGH EVARQAQTSQ DSYHDKAREH PDDGKHPDGG bmy_15291T0/1-326 ---------- ---------- DDSRVVLVPS DCYCVTSAGR GD-------- ENSP00000265165/1-399 ADIKSSLVNE SEIIPASNGH EVARQAQTSQ EPYHDKAREH PDDGKHPDGG ENSBTAP00000008991/1-399 ADIKSSLVNE SEIIPASNGH EVARQAQTSQ ESYHDKAREH PDDGKHPDGG BACU014396/1-371 ADIKSSLVNE SEIIPASNGH EVARQAQTSQ DSYHDKAREH PDDGKHPDGG 101 150 ENSTTRP00000007673/1-396 LYNKGPSYSS YSGYIMMPNM NSDPYMSNGS LSPPIPRTMS MPLSCFDTAH bmy_15291T0/1-326 -----RSWAS ILTAVLVVTL Q--------- ---------S NKVPVVQPSH ENSP00000265165/1-399 LYNKGPSYSS YSGYIMMPNM NNDPYMSNGS LSPPIPRT-S NKVPVVQPSH ENSBTAP00000008991/1-399 LYNKGPSYSS YSGYIMMPNM NNDPYMSNGS LSPPIPRT-S NKVPVVQPSH BACU014396/1-371 LYNKGPSYSS YSGYIMMPNM NNDPYMSNGS LSPPIPRT-S NKVPVVQPSH 151 200 ENSTTRP00000007673/1-396 PSPSLLKSIL VCV--FIP-V LPLSIPY-IC VSYGMSRHPP APEIPTFYPL bmy_15291T0/1-326 AVHPLTPLIT YSDEHFSPGS HPSHLPSDVS SKQGMSRHPP APEIPTFYPL ENSP00000265165/1-399 AVHPLTPLIT YSDEHFSPGS HPSHIPSDVN SKQGMSRHPP APDIPTFYPL ENSBTAP00000008991/1-399 AVHPLTPLIT YSDEHFSPGS HPSHIPSDVN SKQGMSRHPP APEIPTFYPL BACU014396/1-371 AVHPLTPLIT YSDEHFSPGS HPSHLPSDVS SKQGMSRHPP APEIPTFYPL 201 250 ENSTTRP00000007673/1-396 SPGGVGQITP PLGWQGQPVY PVTGGFRQPY PSSLSVDTSM SRFSHHMIPG bmy_15291T0/1-326 SPGGVGQITP PLGWQGQPVY PVTGGFRQPY PSSLSVDTSM SRFSHHMIPG ENSP00000265165/1-399 SPGGVGQITP PLGWQGQPVY PITGGFRQPY PSSLSVDTSM SRFSHHMIPG ENSBTAP00000008991/1-399 SPGGVGQITP PLGWQGQPVY PITGGFRQPY PSSLSVDTSM SRFSHHMIPG BACU014396/1-371 SPGGVGQITP PLGW------ ---------- ---------- --FSHHMIPG 251 300 ENSTTRP00000007673/1-396 PPGPHTTGIP HPAIVTPQVK QEHPHTDSDL MHVKPQHEQX XXXXXXXXXX bmy_15291T0/1-326 PPGPHTTGIP HPAIVTPQVK QEHPHTDSDL MHVKPQHEQR KEQEPKRPHI ENSP00000265165/1-399 PPGPHTTGIP HPAIVTPQVK QEHPHTDSDL MHVKPQHEQR KEQEPKRPHI ENSBTAP00000008991/1-399 PPGPHTTGIP HPAIVTPQVK QEHPHTDSDL MHVKPQHEQR KEQEPKRPHI BACU014396/1-371 PPGPHTTGIP HPAIVTPQVK QEHPHTDSDL MHVKPQHEQR KEQEPKRPHI 301 350 ENSTTRP00000007673/1-396 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXWHA LSREEQAKYY bmy_15291T0/1-326 KKPLNAFMLY MKEMRANVVA ECTLKESAAI NQILGRRWHA LSREEQAKYY ENSP00000265165/1-399 KKPLNAFMLY MKEMRANVVA ECTLKESAAI NQILGRRWHA LSREEQAKYY ENSBTAP00000008991/1-399 KKPLNAFMLY MKEMRANVVA ECTLKESAAI NQILGRRWHA LSREEQAKYY BACU014396/1-371 KKPLNAFMLY MKEMRANVVA ECTLKESAAI NQILGRRWHA LSREEQAKYY 351 400 ENSTTRP00000007673/1-396 ELARKERQLH MQLYPGWSAR DNYGKKKKRK REKLQESTSG TGPRMTAAYI bmy_15291T0/1-326 ELARKERQLH MQLYPGWSAR DNYGKKKKRK REKLQESTS- --EYMKIKYF ENSP00000265165/1-399 ELARKERQLH MQLYPGWSAR DNYGKKKKRK REKLQESASG TGPRMTAAYI ENSBTAP00000008991/1-399 ELARKERQLH MQLYPGWSAR DNYGKKKKRK REKLQESTSG TGPRMTAAYI BACU014396/1-371 ELARKERQLH MQLYPGWSAR DNYGKKKKRK REKLQESTSG TGPRMTAAYI 401 450 ENSTTRP00000007673/1-396 ---------- ---------- -- bmy_15291T0/1-326 LIPHAIILQC NVPYGLCTPP LK ENSP00000265165/1-399 ---------- ---------- -- ENSBTAP00000008991/1-399 ---------- ---------- -- BACU014396/1-371 ---------- ---------- --