KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 16:37:01 2014 Check: 00 ..
Name: BACU008085/1-398 Len: 450 Check: 5701 Weight: 1.00
Name: bmy_04698T0/1-301 Len: 450 Check: 8190 Weight: 1.00
Name: ENSP00000446680/1-304 Len: 450 Check: 5876 Weight: 1.00
Name: ENSBTAP00000009028/1-304 Len: 450 Check: 5089 Weight: 1.00
//
1 50
BACU008085/1-398 ---------- ---------- ---------- ---------- ----------
bmy_04698T0/1-301 MAQPNGLWDS GKSEPERAQC SSCSSTSTED HRGSGIRSKT SIWSRQEKRT
ENSP00000446680/1-304 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000009028/1-304 ---------- ---------- ---------- ---------- ----------
51 100
BACU008085/1-398 MFNSVNLGNF CSPSRKERGA DFGERGSCAS NLYLPSCTYY VPEFSTVSSF
bmy_04698T0/1-301 MFNSVNLGNF CSPSRKERGA DFGERGSCAS NLYLPSCTYY VPEFSTVSSF
ENSP00000446680/1-304 MFNSVNLGNF CSPSRKERGA DFGERGSCAS NLYLPSCTYY MPEFSTVSSF
ENSBTAP00000009028/1-304 MFNSVNLGNF CSPSRKERGA DFGERGSCAS NLYLPSCTYY VPEFSTVSSF
101 150
BACU008085/1-398 LPQAPSRQIS YPYPAQVPPV REVSYGLEPS GKWHHRNSYS SCYAAADELM
bmy_04698T0/1-301 LPQAPSRQIS YPYPAQVPPV REVSYGLEPS GKWHHRNSYS SCYAAADELM
ENSP00000446680/1-304 LPQAPSRQIS YPYSAQVPPV REVSYGLEPS GKWHHRNSYS SCYAAADELM
ENSBTAP00000009028/1-304 LPQAPSRQIS YPYPAQVPPV REVSYGLEPS GKWHPRNSYS SCYAAADELM
151 200
BACU008085/1-398 HRECLPPSTV TEILMKNEGS YGGHHHPSAP HAAPAGFYSS VNKNSVLPQA
bmy_04698T0/1-301 HRECLPPSTV TEILMKNEGS YGGHHHPSAP HAAPAGFYSS VNKNSVLPQA
ENSP00000446680/1-304 HRECLPPSTV TEILMKNEGS YGGHHHPSAP HATPAGFYSS VNKNSVLPQA
ENSBTAP00000009028/1-304 HRECLPPSTV TEILMKNEGS YGGHHHPSAP HAAPAGFYSS VNKNSVLPQA
201 250
BACU008085/1-398 FDRFFDNAYC GGGDASAEPP CPGKGEAKGE PEAPPASGLA SRAEAGPEAE
bmy_04698T0/1-301 FDRFFDNAYC GGGDASAEPP CPGK------ ---------- ----------
ENSP00000446680/1-304 FDRFFDNAYC GGGDPPAEPP CSGKGEAKGE PEAPPASGLA SRAEAGAEAE
ENSBTAP00000009028/1-304 FDRFFDNAYC GGGDPPAEPP CPGKGEAKGE PEAPPASGLA SRAEAGAEAE
251 300
BACU008085/1-398 AEEENTNPSS SGSAHSAAKE PAKGAAPRRP PHPQEALPL- -FEIPDPGTG
bmy_04698T0/1-301 ---------- ---------- -------DAP RTRKKRCPYS KFQIREL---
ENSP00000446680/1-304 AEEENTNPSS SGSAHSVAKE PAKGAAPNAP RTRKKRCPYS KFQIREL---
ENSBTAP00000009028/1-304 AEEENTNPSS SGSAHSAAKE PAKGAAPNAP RTRKKRCPYS KFQIREL---
301 350
BACU008085/1-398 ARVFLQRVYQ QREAAAAVPD AEPDGPTSEN LVSEQKDERK KTKQRPAAVF
bmy_04698T0/1-301 EREFFFNVYI NKEKRLQL-- -------SRM LNLTDRQVKI WFQNRRM---
ENSP00000446680/1-304 EREFFFNVYI NKEKRLQL-- -------SRM LNLTDRQVKI WFQNRRM---
ENSBTAP00000009028/1-304 EREFFFNVYI NKEKRLQL-- -------SRM LNLTDRQVKI WFQNRRM---
351 400
BACU008085/1-398 LGKSSAVTAD RALWGEGGKG EIILFYFYFL FSNSPSFRGW KTGLWPGLAP
bmy_04698T0/1-301 --KEKKLSRD RLQY------ ---------- FSGNPLL--- ----------
ENSP00000446680/1-304 --KEKKLSRD RLQY------ ---------- FSGNPLL--- ----------
ENSBTAP00000009028/1-304 --KEKKLSRD RLQY------ ---------- FSGNPLL--- ----------
401 450
BACU008085/1-398 TAVARTSFRN LLHLGLTQCG TGTGPGKGGE GKCLIHGEWT PLAPRPRIFI
bmy_04698T0/1-301 ---------- ---------- ---------- ---------- ----------
ENSP00000446680/1-304 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000009028/1-304 ---------- ---------- ---------- ---------- ----------