KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:01 2014 Check: 00 .. Name: ENSTTRP00000000441/1-322 Len: 367 Check: 6460 Weight: 1.00 Name: bmy_06736T0/1-367 Len: 367 Check: 3511 Weight: 1.00 Name: ENSP00000240333/1-322 Len: 367 Check: 1921 Weight: 1.00 Name: BACU006416/1-355 Len: 367 Check: 7772 Weight: 1.00 Name: ENSBTAP00000009034/1-355 Len: 367 Check: 8520 Weight: 1.00 // 1 50 ENSTTRP00000000441/1-322 ---------- ---------- ---------- ---MTASSSL VPDRLRLPLC bmy_06736T0/1-367 MRPLSPVGDV RLDLSPPPLP AVSGSPVGSS GRLMAASSSL VPDRLRLPLC ENSP00000240333/1-322 ---------- ---------- ---------- ---MASSSSL VPDRLRLPLC BACU006416/1-355 MRPLSPVGDV RLDLSPPLLP AVSGSPVGSS GRLMAASSSL VPDRLRLPLC ENSBTAP00000009034/1-355 MRPLSPVGDV RLDLSPPPLP AVSGSPVGSS GRLMAASSSL VPDRLRLPLC 51 100 ENSTTRP00000000441/1-322 FLGVFVCYFY YGILQEKITR GKYGEGAKQE TFTFALTLVF IQCVINAVFA bmy_06736T0/1-367 FLGVFVCYFY YGILQEKITR GKYGEGAKQE TFTFALTLVF IQCVINAVFA ENSP00000240333/1-322 FLGVFVCYFY YGILQEKITR GKYGEGAKQE TFTFALTLVF IQCVINAVFA BACU006416/1-355 FLGVFVCYFY YGILQEKITR GKYGEGAKQE TFTFALTLVF IQCVINAVFA ENSBTAP00000009034/1-355 FLGVFVCYFY YGILQEKITR GKYGEGAKQE TFTFALTLVF IQCVVNAVFA 101 150 ENSTTRP00000000441/1-322 KIXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXX---- bmy_06736T0/1-367 KILIQFFDTA RVDRTRSWLY AACSVSYLGA MVSSNSALQF VNYPTQEESV ENSP00000240333/1-322 KILIQFFDTA RVDRTRSWLY AACSISYLGA MVSSNSALQF VNYPTQ---- BACU006416/1-355 KILIQFFDTA RVDRTRSWLY AACSVSYLGA MVSSNSALQF VNYPTQ---- ENSBTAP00000009034/1-355 KILIQFFDTA RVDRTRSWLY AACSVSYLGA MVSSNSALQF VNYPTQ---- 151 200 ENSTTRP00000000441/1-322 --XLGKSCKP IP------VM LLGVTLLKKK YPMAKYLCVL LIVAGVALFM bmy_06736T0/1-367 GLVNAYGCLN FPLCFFPVVM LLGVTLLKKK YPMAKYLCVL LIVAGVALFM ENSP00000240333/1-322 --VLGKSCKP IP------VM LLGVTLLKKK YPLAKYLCVL LIVAGVALFM BACU006416/1-355 --VLGKSCKP IP------VM LLGVTLLKKK YPMAKYLCVL LIVAGVALFM ENSBTAP00000009034/1-355 --VLGKSCKP IP------VM LLGVTLLKKK YPMAKYLCVL LIVAGVALFM 201 250 ENSTTRP00000000441/1-322 YKPKKVVGIE EHTVGYGELL LLLSLTLDGL TGVSQDHMRA HYQTGSNHMM bmy_06736T0/1-367 YKPKKVVGIE EHTVGYGELL LLLSLTLDGL TGVSQDHMRA HYQTGSNHMM ENSP00000240333/1-322 YKPKKVVGIE EHTVGYGELL LLLSLTLDGL TGVSQDHMRA HYQTGSNHMM BACU006416/1-355 YKPKKVVGIE EHTVGYGELL LLLSLTLDGL TGVSQDHMRA HYQTGSNHMM ENSBTAP00000009034/1-355 YKPKKVVGIE EHTIGYGELL LLLSLTLDGL TGVSQDHMRA HYQTGSNHMM 251 300 ENSTTRP00000000441/1-322 LNINLWSTLL LGAGILFTGE LWEFLSFAER YPAIIYNILL FGLTSALGQS bmy_06736T0/1-367 LNINLWSTLL LGAGILFTGE LWEFLSFAER YPTIIYNILL FGLTSALGQS ENSP00000240333/1-322 LNINLWSTLL LGMGILFTGE LWEFLSFAER YPAIIYNILL FGLTSALGQS BACU006416/1-355 LNINLWSTLL LGAGILFTGE LWEFLSFAER YPTIIYNILL FGLTSALGQS ENSBTAP00000009034/1-355 LNINLWSTLL LGAGILFTGE LWEFLSFAER YPTIVYNILL FGLTSALGQS 301 350 ENSTTRP00000000441/1-322 FIFMTVVYFG PLTCSIITTT RKFFTILASV ILFANPISPM QWVGTVLVFL bmy_06736T0/1-367 FIFMTVVYFG PLTCSIITTT RKFFTILASV ILFANPISPM QWVGTVLVFL ENSP00000240333/1-322 FIFMTVVYFG PLTCSIITTT RKFFTILASV ILFANPISPM QWVGTVLVFL BACU006416/1-355 FIFMTVVYFG PLTCSIITTT RKFFTILASV ILFANPISPM QWVGTVLVFL ENSBTAP00000009034/1-355 FIFMTVVYFG PLTCSIITTT RKFFTILASV ILFANPISPM QWVGTVLVFL 351 400 ENSTTRP00000000441/1-322 GLGLDAKFGK GAKKTSH bmy_06736T0/1-367 GLGLDAKFGK GAKKTSH ENSP00000240333/1-322 GLGLDAKFGK GAKKTSH BACU006416/1-355 GLGLDAKFGK GAKKTSH ENSBTAP00000009034/1-355 GLGLDAKFGK GAKKTSH