KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:01 2014 Check: 00 .. Name: bmy_06735T0/1-409 Len: 455 Check: 286 Weight: 1.00 Name: ENSP00000240364/1-453 Len: 455 Check: 7043 Weight: 1.00 Name: ENSBTAP00000009042/1-453 Len: 455 Check: 3649 Weight: 1.00 Name: ENSTTRP00000000442/1-395 Len: 455 Check: 6523 Weight: 1.00 Name: BACU006417/1-181 Len: 455 Check: 2546 Weight: 1.00 // 1 50 bmy_06735T0/1-409 ---------- -------RGK VG----YCVC CLLADVQVCG LCSL------ ENSP00000240364/1-453 MAGAAAGGRG GGAWGPGRGG AGGLRRGCSP PAPAGSPRAG LQPLRATIPF ENSBTAP00000009042/1-453 MAGAAAGGRG GGAWGPGRGG AGGLRRGCSP PVPAGSPRAG LQPLRATVPF ENSTTRP00000000442/1-395 ---------- ---------- ---------- ---------- ---------- BACU006417/1-181 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_06735T0/1-409 ---------- ----PASVPC SVAPEKPVWR PQPPQVRRTF SLDTILSSYL ENSP00000240364/1-453 QLQQPHQRRD GGGRAASVPC SVAPEKSVCR PQPLQVRRTF SLDTILSSYL ENSBTAP00000009042/1-453 QLQQPHQRRD GGGRAASVPC SVAPEKPVCR PQPPQVRRTF SLDTILSSYL ENSTTRP00000000442/1-395 --------RD GGGRAASIPC SVAPEKPVCR PQPPQVRRTF SLDTILSSYL BACU006417/1-181 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_06735T0/1-409 LGQWPRDADG AFTCCTNDKA TQTPLSWQEL EGERASLSTH KRSASWGSTD ENSP00000240364/1-453 LGQWPRDADG AFTCCTNDKA TQTPLSWQEL EGERASSCAH KRSASWGSTD ENSBTAP00000009042/1-453 LGQWPRDADG AFTCCTNDKA TQTPLSWQEL EGERAISCTH KRSASWGSTD ENSTTRP00000000442/1-395 LGQWPRDADG AFTCCTNDKA TQTPLSWQEL EGERASSCTH KRSASWGSTD BACU006417/1-181 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_06735T0/1-409 HRKEITKLKQ QLQRTKLSRS GKEKERGSPL QGDHAVRGAL RASPPSFPSG ENSP00000240364/1-453 HRKEISKLKQ QLQRTKLSRS GKEKERGSPL LGDHAVRGAL RASPPSFPSG ENSBTAP00000009042/1-453 HRKEITKLKQ QLQRTKLSRS GKEKERGSPL QGDRAVRGAR RASPPSFPTG ENSTTRP00000000442/1-395 HRKEITKLKQ QLQRTKLSRS GKEKERGSPL QGDHAVRGTL RASPPSFPSG BACU006417/1-181 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_06735T0/1-409 SPVLRLSPCL HRSLEGLNQE LEEVFVKEQG EEELLRILEI PDGHRAPAPP ENSP00000240364/1-453 SPVLRLSPCL HRSLEGLNQE LEEVFVKEQG EEELLRILDI PDGHRAPAPP ENSBTAP00000009042/1-453 SPVLRLSPCL HRSLEGLNQE LEEVFVKDQG EEELLRILEI PDGHRAPAPS ENSTTRP00000000442/1-395 SAVLRLSPCL HRSLEGLNQE LEEVFVKEQG EEELLRILEI PDGHRAPAPP BACU006417/1-181 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_06735T0/1-409 QSGSCDHPLL LLDPGNLASS PSMPLASPQP SGQTSLEEHQ GAAEELTSIP ENSP00000240364/1-453 QSGSCDHPLL LLEPGNLASS PSMSLASPQP CGLASHEEHR GAAEELASTP ENSBTAP00000009042/1-453 QSGSCDHPLL LLEPGNLASS PSIPLASPQP SGQTSREEHR GAAEELASVP ENSTTRP00000000442/1-395 QSGSCDHPLL LLEPGNLASS PSMPLASPQP SGQTSREEHQ GAAEELTSIP BACU006417/1-181 ---------- ---------- --MPLASPQP SGQTSLEEHQ GAAEELTSIP 301 350 bmy_06735T0/1-409 SDKAERIKSQ NF-PNAPQSP LAGAKKRVHH IPTATVIFIR ADS----XWK ENSP00000240364/1-453 NDKASSPGHP AFLEDGSPSP VLAFAASPR- -PNHSYIFKR EPPEGCEKVR ENSBTAP00000009042/1-453 SDKASSPGHP TFLEDGSPSP VLAFAASPR- -PNHSYVFKR EPPEGCERVR ENSTTRP00000000442/1-395 SDKASPPGHP AFLEEGSPSP VLAFASSPR- -PNHSYVFKR EPPEGCERVR BACU006417/1-181 SDKASPPGHP AFLEEGSPSP VLAFAASPR- -PNHSYVFKR EPPEGCERVR 351 400 bmy_06735T0/1-409 LWIRWQSPGP DLAFLTSCPD KNKVHFNPTG SAFCPVSLMK PLFPSMGFIF ENSP00000240364/1-453 VFEEATSPGP DLAFLTSCPD KNKVHFNPTG SAFCPVNLMK PLFPGMGFIF ENSBTAP00000009042/1-453 VFEEATSPGP DLAFLTSCPD KNKVHFNPTG SAFCPVSLMK PLFPSMGFIF ENSTTRP00000000442/1-395 VFEEATSPGP DLAFLTSCPD KNKVHFNPTG SAFCPVSLMK PLFPSMGFIF BACU006417/1-181 VFEEATSPGP DLAFLTSCPD KNKVHFNPTG SAFCPVSLMK PLFPSMGFIF 401 450 bmy_06735T0/1-409 RNCPSSPGSP LPPASPRPPP RKDPEAPKAS SLPFEPWQRP PPSEEPVLFQ ENSP00000240364/1-453 RNCPSNPGSP LPPASPRPPP RKDPEASKAS PLPFEPWQRT PPSEEPVLFQ ENSBTAP00000009042/1-453 RNCPSSPGSP LPPASSRPPP RKDPEASKAS SLPFEPWQRT PPSEEPVLFQ ENSTTRP00000000442/1-395 RNCPSSPGSP LPPASPRPPP QKDPEAPKAS SLPFEPWQRP PPSEEPVLFQ BACU006417/1-181 RNCPSSPGSP LPPASPRPPP RKDPEAPKAS SLPFEPWQRP PPSEEPVLFQ 451 500 bmy_06735T0/1-409 SSLVV ENSP00000240364/1-453 SSLMV ENSBTAP00000009042/1-453 SSLVV ENSTTRP00000000442/1-395 SSLVV BACU006417/1-181 SSLVV