KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:37:02 2014  Check: 00 ..

 Name: ENSTTRP00000007599/1-68   Len:    612  Check:  2790  Weight:  1.00
 Name: ENSP00000262056/1-611     Len:    612  Check:  1017  Weight:  1.00
 Name: ENSBTAP00000009044/1-610  Len:    612  Check:  5994  Weight:  1.00
 Name: bmy_04665T0/1-612         Len:    612  Check:  3086  Weight:  1.00
 Name: BACU008064/1-612          Len:    612  Check:  3084  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000007599/1-68   MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVSKPVSW ADETDDLEGD 
ENSP00000262056/1-611     MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVSKPVSW ADETDDLEGD 
ENSBTAP00000009044/1-610  MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVPKPVSW ADETDDLEGD 
bmy_04665T0/1-612         MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVPKPVSW ADETDDLEGD 
BACU008064/1-612          PFKIAKKKNK KGKTISLTDF LAEDGGTGGG STYVPKPVSW ADETDDLEGD 


                          51                                                 100
ENSTTRP00000007599/1-68   VSTTWQ---- ---------- ---------- ---------- ---------- 
ENSP00000262056/1-611     VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL 
ENSBTAP00000009044/1-610  VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL 
bmy_04665T0/1-612         VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL 
BACU008064/1-612          VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL 


                          101                                                150
ENSTTRP00000007599/1-68   ---------- ---------- ---------- ---------- --------SL 
ENSP00000262056/1-611     GNLPYDVTEE SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL 
ENSBTAP00000009044/1-610  GNLPYDVTED SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL 
bmy_04665T0/1-612         GNLPYDVTED SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL 
BACU008064/1-612          GNLPYDVTED SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL 


                          151                                                200
ENSTTRP00000007599/1-68   LTQL------ ---------- ---------- ---------- ---------- 
ENSP00000262056/1-611     LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR 
ENSBTAP00000009044/1-610  LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR 
bmy_04665T0/1-612         LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR 
BACU008064/1-612          LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR 


                          201                                                250
ENSTTRP00000007599/1-68   ---------- ---------- ---------- ---------- ---------- 
ENSP00000262056/1-611     ARPATDSFDD YPPRRGDDSF GDKYRDRYDS DRYRDGYRDG YRDGPRRDMD 
ENSBTAP00000009044/1-610  ARPAADSFDD YPPRRGDDSF GDKYRDRYDS DRYRDGYRDS YRDGPRRDMD 
bmy_04665T0/1-612         ARPATDSFDD YPPRRGDDSF GDKFRDRYDS DRYRDGYRDS YRDGPRRDMD 
BACU008064/1-612          ARPATDSFDD YPPRRGDDSF GDKFRDRYDS DRYRDGYRDS YREGPRRDMD 


                          251                                                300
ENSTTRP00000007599/1-68   ---------- ---------- ---------- ---------- ---------- 
ENSP00000262056/1-611     RYGGRDRYDD RGSRDYDRGY DSRIGSGRRA FGSGYRRDDD YRGGGDRYED 
ENSBTAP00000009044/1-610  RYGGRDRYDD RGGRDYDRGY DSRIGSGRRA FGSGYRRDDD YRGGGDRYED 
bmy_04665T0/1-612         RYGGRDRYDD RGSRDYDRGY DSRIGSGRRA FGSGYRRDDD FRGGGDRYED 
BACU008064/1-612          RYGGRDRYDD RGSRDYDRGY DSRIGSGRRA FGSGYRRDDD FRGGGDRYED 


                          301                                                350
ENSTTRP00000007599/1-68   ---------- ---------- ---------- ---------- ---------- 
ENSP00000262056/1-611     RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS 
ENSBTAP00000009044/1-610  RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS 
bmy_04665T0/1-612         RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS 
BACU008064/1-612          RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS 


                          351                                                400
ENSTTRP00000007599/1-68   ---------- ---------- ---------- ---------- ---------- 
ENSP00000262056/1-611     TSQSTRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP 
ENSBTAP00000009044/1-610  TSQSSRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP 
bmy_04665T0/1-612         TSQSSRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP 
BACU008064/1-612          TSQSSRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP 


                          401                                                450
ENSTTRP00000007599/1-68   ---------- ---------- ---------- ---------- -----LENE- 
ENSP00000262056/1-611     RERHPSWRSE ETQERERSRT GSESSQTGTS TTSSRNARRR ESEKSLENET 
ENSBTAP00000009044/1-610  RERHPSWRSE ETQERERSRT GSESSQTGTS ATSGRNARRR ESEKSLENET 
bmy_04665T0/1-612         RERHPSWRSE ETQERERSRT GSESSQTGTS ATSGRNARRR ESEKSLENET 
BACU008064/1-612          RERHPSWRSE ETQERERSRT GSESSQTGTS ATSGRNARRR ESEKSLENET 


                          451                                                500
ENSTTRP00000007599/1-68   ---------- ---------- ---------- ---------- ---------- 
ENSP00000262056/1-611     LNKEEDCHSP TSKPPKPDQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT 
ENSBTAP00000009044/1-610  PNKEEDCQSP TSKPPKPEQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT 
bmy_04665T0/1-612         PNKEEDCQSP TSKPPKPEQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT 
BACU008064/1-612          PNKEEDCQSP TSKPPKPEQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT 


                          501                                                550
ENSTTRP00000007599/1-68   ---------- ---------- ---------- ---------- ---------- 
ENSP00000262056/1-611     EQQSPTSGGG KVAPAQPSEE GPGRK-DENK VDGMNAPKGQ TGNSSRGPGD 
ENSBTAP00000009044/1-610  EQQSPTSGGG KVVPAQLSEE GSARK-DENK VDGVSAPKGQ SGSSSRGPGD 
bmy_04665T0/1-612         EQQSPTSGGG KVVPAQPSEE GPVRKADENK VDGVSAPKGQ SGNSSRGPGD 
BACU008064/1-612          EQQSPTSGGG KVVPAQPSEE GPVRKADENK VDGVSAPKGQ SGNSSRGPGD 


                          551                                                600
ENSTTRP00000007599/1-68   ---------- ---------- ---------- ---------- --KY------ 
ENSP00000262056/1-611     GGNRDHWKES DRKDGKKDQD SRSAPEPKKP EENPASKFSS ASKYAALSVD 
ENSBTAP00000009044/1-610  GGNKDHWKEA DRKDGKKDHD SRSAPEPKKA EENPASKFSS ASKYAALAID 
bmy_04665T0/1-612         GGNKDHWKES DRKDGKKDQD SRSAPEPKKA EENPASKFSS ASKYAALAVD 
BACU008064/1-612          GGNKDHWKES DRKDGKKDQD SRSALEPKKA EENPASKFSS ASKYAALAVD 


                          601                                                650
ENSTTRP00000007599/1-68   ---------- -- 
ENSP00000262056/1-611     GEDENEGEDY AE 
ENSBTAP00000009044/1-610  GEDENEG-DY TE 
bmy_04665T0/1-612         GEDENEGEDY TE 
BACU008064/1-612          GEDENEGEDY TE