KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:02 2014 Check: 00 .. Name: ENSTTRP00000007599/1-68 Len: 612 Check: 2790 Weight: 1.00 Name: ENSP00000262056/1-611 Len: 612 Check: 1017 Weight: 1.00 Name: ENSBTAP00000009044/1-610 Len: 612 Check: 5994 Weight: 1.00 Name: bmy_04665T0/1-612 Len: 612 Check: 3086 Weight: 1.00 Name: BACU008064/1-612 Len: 612 Check: 3084 Weight: 1.00 // 1 50 ENSTTRP00000007599/1-68 MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVSKPVSW ADETDDLEGD ENSP00000262056/1-611 MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVSKPVSW ADETDDLEGD ENSBTAP00000009044/1-610 MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVPKPVSW ADETDDLEGD bmy_04665T0/1-612 MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVPKPVSW ADETDDLEGD BACU008064/1-612 PFKIAKKKNK KGKTISLTDF LAEDGGTGGG STYVPKPVSW ADETDDLEGD 51 100 ENSTTRP00000007599/1-68 VSTTWQ---- ---------- ---------- ---------- ---------- ENSP00000262056/1-611 VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL ENSBTAP00000009044/1-610 VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL bmy_04665T0/1-612 VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL BACU008064/1-612 VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL 101 150 ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- --------SL ENSP00000262056/1-611 GNLPYDVTEE SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL ENSBTAP00000009044/1-610 GNLPYDVTED SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL bmy_04665T0/1-612 GNLPYDVTED SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL BACU008064/1-612 GNLPYDVTED SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL 151 200 ENSTTRP00000007599/1-68 LTQL------ ---------- ---------- ---------- ---------- ENSP00000262056/1-611 LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR ENSBTAP00000009044/1-610 LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR bmy_04665T0/1-612 LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR BACU008064/1-612 LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR 201 250 ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ---------- ENSP00000262056/1-611 ARPATDSFDD YPPRRGDDSF GDKYRDRYDS DRYRDGYRDG YRDGPRRDMD ENSBTAP00000009044/1-610 ARPAADSFDD YPPRRGDDSF GDKYRDRYDS DRYRDGYRDS YRDGPRRDMD bmy_04665T0/1-612 ARPATDSFDD YPPRRGDDSF GDKFRDRYDS DRYRDGYRDS YRDGPRRDMD BACU008064/1-612 ARPATDSFDD YPPRRGDDSF GDKFRDRYDS DRYRDGYRDS YREGPRRDMD 251 300 ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ---------- ENSP00000262056/1-611 RYGGRDRYDD RGSRDYDRGY DSRIGSGRRA FGSGYRRDDD YRGGGDRYED ENSBTAP00000009044/1-610 RYGGRDRYDD RGGRDYDRGY DSRIGSGRRA FGSGYRRDDD YRGGGDRYED bmy_04665T0/1-612 RYGGRDRYDD RGSRDYDRGY DSRIGSGRRA FGSGYRRDDD FRGGGDRYED BACU008064/1-612 RYGGRDRYDD RGSRDYDRGY DSRIGSGRRA FGSGYRRDDD FRGGGDRYED 301 350 ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ---------- ENSP00000262056/1-611 RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS ENSBTAP00000009044/1-610 RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS bmy_04665T0/1-612 RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS BACU008064/1-612 RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS 351 400 ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ---------- ENSP00000262056/1-611 TSQSTRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP ENSBTAP00000009044/1-610 TSQSSRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP bmy_04665T0/1-612 TSQSSRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP BACU008064/1-612 TSQSSRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP 401 450 ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- -----LENE- ENSP00000262056/1-611 RERHPSWRSE ETQERERSRT GSESSQTGTS TTSSRNARRR ESEKSLENET ENSBTAP00000009044/1-610 RERHPSWRSE ETQERERSRT GSESSQTGTS ATSGRNARRR ESEKSLENET bmy_04665T0/1-612 RERHPSWRSE ETQERERSRT GSESSQTGTS ATSGRNARRR ESEKSLENET BACU008064/1-612 RERHPSWRSE ETQERERSRT GSESSQTGTS ATSGRNARRR ESEKSLENET 451 500 ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ---------- ENSP00000262056/1-611 LNKEEDCHSP TSKPPKPDQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT ENSBTAP00000009044/1-610 PNKEEDCQSP TSKPPKPEQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT bmy_04665T0/1-612 PNKEEDCQSP TSKPPKPEQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT BACU008064/1-612 PNKEEDCQSP TSKPPKPEQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT 501 550 ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ---------- ENSP00000262056/1-611 EQQSPTSGGG KVAPAQPSEE GPGRK-DENK VDGMNAPKGQ TGNSSRGPGD ENSBTAP00000009044/1-610 EQQSPTSGGG KVVPAQLSEE GSARK-DENK VDGVSAPKGQ SGSSSRGPGD bmy_04665T0/1-612 EQQSPTSGGG KVVPAQPSEE GPVRKADENK VDGVSAPKGQ SGNSSRGPGD BACU008064/1-612 EQQSPTSGGG KVVPAQPSEE GPVRKADENK VDGVSAPKGQ SGNSSRGPGD 551 600 ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- --KY------ ENSP00000262056/1-611 GGNRDHWKES DRKDGKKDQD SRSAPEPKKP EENPASKFSS ASKYAALSVD ENSBTAP00000009044/1-610 GGNKDHWKEA DRKDGKKDHD SRSAPEPKKA EENPASKFSS ASKYAALAID bmy_04665T0/1-612 GGNKDHWKES DRKDGKKDQD SRSAPEPKKA EENPASKFSS ASKYAALAVD BACU008064/1-612 GGNKDHWKES DRKDGKKDQD SRSALEPKKA EENPASKFSS ASKYAALAVD 601 650 ENSTTRP00000007599/1-68 ---------- -- ENSP00000262056/1-611 GEDENEGEDY AE ENSBTAP00000009044/1-610 GEDENEG-DY TE bmy_04665T0/1-612 GEDENEGEDY TE BACU008064/1-612 GEDENEGEDY TE