KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:37:02 2014 Check: 00 ..
Name: ENSTTRP00000007599/1-68 Len: 612 Check: 2790 Weight: 1.00
Name: ENSP00000262056/1-611 Len: 612 Check: 1017 Weight: 1.00
Name: ENSBTAP00000009044/1-610 Len: 612 Check: 5994 Weight: 1.00
Name: bmy_04665T0/1-612 Len: 612 Check: 3086 Weight: 1.00
Name: BACU008064/1-612 Len: 612 Check: 3084 Weight: 1.00
//
1 50
ENSTTRP00000007599/1-68 MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVSKPVSW ADETDDLEGD
ENSP00000262056/1-611 MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVSKPVSW ADETDDLEGD
ENSBTAP00000009044/1-610 MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVPKPVSW ADETDDLEGD
bmy_04665T0/1-612 MAASAKKKNK KGKTISLTDF LAEDGGTGGG STYVPKPVSW ADETDDLEGD
BACU008064/1-612 PFKIAKKKNK KGKTISLTDF LAEDGGTGGG STYVPKPVSW ADETDDLEGD
51 100
ENSTTRP00000007599/1-68 VSTTWQ---- ---------- ---------- ---------- ----------
ENSP00000262056/1-611 VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL
ENSBTAP00000009044/1-610 VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL
bmy_04665T0/1-612 VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL
BACU008064/1-612 VSTTWHSNDD DVYRAPPIDR SILPTAPRAA REPNIDRSRL PKSPPYTAFL
101 150
ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- --------SL
ENSP00000262056/1-611 GNLPYDVTEE SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL
ENSBTAP00000009044/1-610 GNLPYDVTED SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL
bmy_04665T0/1-612 GNLPYDVTED SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL
BACU008064/1-612 GNLPYDVTED SIKEFFRGLN ISAVRLPREP SNPERLKGFG YAEFEDLDSL
151 200
ENSTTRP00000007599/1-68 LTQL------ ---------- ---------- ---------- ----------
ENSP00000262056/1-611 LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR
ENSBTAP00000009044/1-610 LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR
bmy_04665T0/1-612 LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR
BACU008064/1-612 LSALSLNEES LGNRRIRVDV ADQAQDKDRD DRSFGRDRNR DSDKTDTDWR
201 250
ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ----------
ENSP00000262056/1-611 ARPATDSFDD YPPRRGDDSF GDKYRDRYDS DRYRDGYRDG YRDGPRRDMD
ENSBTAP00000009044/1-610 ARPAADSFDD YPPRRGDDSF GDKYRDRYDS DRYRDGYRDS YRDGPRRDMD
bmy_04665T0/1-612 ARPATDSFDD YPPRRGDDSF GDKFRDRYDS DRYRDGYRDS YRDGPRRDMD
BACU008064/1-612 ARPATDSFDD YPPRRGDDSF GDKFRDRYDS DRYRDGYRDS YREGPRRDMD
251 300
ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ----------
ENSP00000262056/1-611 RYGGRDRYDD RGSRDYDRGY DSRIGSGRRA FGSGYRRDDD YRGGGDRYED
ENSBTAP00000009044/1-610 RYGGRDRYDD RGGRDYDRGY DSRIGSGRRA FGSGYRRDDD YRGGGDRYED
bmy_04665T0/1-612 RYGGRDRYDD RGSRDYDRGY DSRIGSGRRA FGSGYRRDDD FRGGGDRYED
BACU008064/1-612 RYGGRDRYDD RGSRDYDRGY DSRIGSGRRA FGSGYRRDDD FRGGGDRYED
301 350
ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ----------
ENSP00000262056/1-611 RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS
ENSBTAP00000009044/1-610 RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS
bmy_04665T0/1-612 RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS
BACU008064/1-612 RYDRRDDRSW SSRDDYSRDD YRRDDRGPPQ RPKLNLKPRS TPKEDDSSAS
351 400
ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ----------
ENSP00000262056/1-611 TSQSTRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP
ENSBTAP00000009044/1-610 TSQSSRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP
bmy_04665T0/1-612 TSQSSRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP
BACU008064/1-612 TSQSSRAASI FGGAKPVDTA AREREVEERL QKEQEKLQRQ LDEPKLERRP
401 450
ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- -----LENE-
ENSP00000262056/1-611 RERHPSWRSE ETQERERSRT GSESSQTGTS TTSSRNARRR ESEKSLENET
ENSBTAP00000009044/1-610 RERHPSWRSE ETQERERSRT GSESSQTGTS ATSGRNARRR ESEKSLENET
bmy_04665T0/1-612 RERHPSWRSE ETQERERSRT GSESSQTGTS ATSGRNARRR ESEKSLENET
BACU008064/1-612 RERHPSWRSE ETQERERSRT GSESSQTGTS ATSGRNARRR ESEKSLENET
451 500
ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ----------
ENSP00000262056/1-611 LNKEEDCHSP TSKPPKPDQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT
ENSBTAP00000009044/1-610 PNKEEDCQSP TSKPPKPEQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT
bmy_04665T0/1-612 PNKEEDCQSP TSKPPKPEQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT
BACU008064/1-612 PNKEEDCQSP TSKPPKPEQP LKVMPAPPPK ENAWVKRSSN PPARSQSSDT
501 550
ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- ----------
ENSP00000262056/1-611 EQQSPTSGGG KVAPAQPSEE GPGRK-DENK VDGMNAPKGQ TGNSSRGPGD
ENSBTAP00000009044/1-610 EQQSPTSGGG KVVPAQLSEE GSARK-DENK VDGVSAPKGQ SGSSSRGPGD
bmy_04665T0/1-612 EQQSPTSGGG KVVPAQPSEE GPVRKADENK VDGVSAPKGQ SGNSSRGPGD
BACU008064/1-612 EQQSPTSGGG KVVPAQPSEE GPVRKADENK VDGVSAPKGQ SGNSSRGPGD
551 600
ENSTTRP00000007599/1-68 ---------- ---------- ---------- ---------- --KY------
ENSP00000262056/1-611 GGNRDHWKES DRKDGKKDQD SRSAPEPKKP EENPASKFSS ASKYAALSVD
ENSBTAP00000009044/1-610 GGNKDHWKEA DRKDGKKDHD SRSAPEPKKA EENPASKFSS ASKYAALAID
bmy_04665T0/1-612 GGNKDHWKES DRKDGKKDQD SRSAPEPKKA EENPASKFSS ASKYAALAVD
BACU008064/1-612 GGNKDHWKES DRKDGKKDQD SRSALEPKKA EENPASKFSS ASKYAALAVD
601 650
ENSTTRP00000007599/1-68 ---------- --
ENSP00000262056/1-611 GEDENEGEDY AE
ENSBTAP00000009044/1-610 GEDENEG-DY TE
bmy_04665T0/1-612 GEDENEGEDY TE
BACU008064/1-612 GEDENEGEDY TE