KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:12 2014 Check: 00 .. Name: BACU000686/1-377 Len: 446 Check: 8478 Weight: 1.00 Name: ENSP00000348527/1-390 Len: 446 Check: 5053 Weight: 1.00 Name: ENSBTAP00000009094/1-346 Len: 446 Check: 8600 Weight: 1.00 Name: bmy_20125T0/1-360 Len: 446 Check: 8888 Weight: 1.00 Name: ENSTTRP00000008108/1-346 Len: 446 Check: 6444 Weight: 1.00 // 1 50 BACU000686/1-377 MDSYDAPEST PRQCASSRLK DYFIGATPLQ KRLESVRKQT SFIPTPPRRK ENSP00000348527/1-390 MDSYSAPEST P--SASSRPE DYFIGATPLQ KRLESVRKQS SFILTPPRRK ENSBTAP00000009094/1-346 MDSYDAPELT PRQDASSRLK DFFVGATPLQ KRLESVRKQT SFIPTPPRRK bmy_20125T0/1-360 MDSYDAPEST PRQCASSRLK DYFIGATPLQ KRLESVRKQT SFIPTPPRRK ENSTTRP00000008108/1-346 MDSYDAPEST PRQCASSGLK DYFIGATPLQ KRLESVRKQT SFIPTPPRRK 51 100 BACU000686/1-377 IPQCSPLQED VDPQKFAFLL HKQWTLYSLT PLYKFSYTNF KEYSRLLNAF ENSP00000348527/1-390 IPQCSQLQED VDPQKVAFLL HKQWTLYSLT PLYKFSYSNL KEYSRLLNAF ENSBTAP00000009094/1-346 IPQGSQLQED VDPQKFAFLL HKQWTLYSLT PLYKFSYTNF KEYSKLLNAF bmy_20125T0/1-360 IPQCSPLQED VDPQKFAFLL HKQWTLYSLT PLYKFSYTNF KEYSKLLNAF ENSTTRP00000008108/1-346 IPQCSQLQED VDPQKFAFLL HKQWTLYSLT PLYKFSYTNF KEYSKLLNAF 101 150 BACU000686/1-377 IAAEKQKGLA VEVGDDFNIK VIFSTLLGMK GTQRDPEAFL VQ-------- ENSP00000348527/1-390 IVAEKQKGLA VEVGEDFNIK VIFSTLLGMK GTQRDPEAFL VQGLILSPRL ENSBTAP00000009094/1-346 IAAEKQKGLA VEVGDDFNIK VVFSTLMGVK GTQRDPEAFL VQ-------- bmy_20125T0/1-360 IAAEKQKGLA VEVGDDFNIK VIFSTLLGMK GTQRDPEAFL VQVYHISSTC ENSTTRP00000008108/1-346 IAAEKQKGLA VEVGDDFNIK VIFSTLLGMK GTQRDPEAFL VQ-------- 151 200 BACU000686/1-377 ---------- ---------- ---------- -------DYI RKQRARGLQP ENSP00000348527/1-390 EYSGTILVDC NLCLLGSSDP STLAFQVAGT AGACHHTRIV SKSQLPSENR ENSBTAP00000009094/1-346 ---------- ---------- ---------- --------IL SKSQLPSEHK bmy_20125T0/1-360 XLG------- ---------- ---------- -----EKNIL SKSQLPSEHR ENSTTRP00000008108/1-346 ---------- ---------- ---------- --------IL SKSQLPSEHR 201 250 BACU000686/1-377 E--------- -VCFRKGTED SVYRE----- ---KDHTAPR PPMLEQRFPF ENSP00000348527/1-390 EGKVLWTGWF CCVFGDSLLE TVSEDFTCLP LFLANGAESN TAIIGTWF-- ENSBTAP00000009094/1-346 EGKVLWTGWF CCVFGDSLLE TVSEDFTCLP LFLVNGAETN TAIIGTWF-- bmy_20125T0/1-360 EGKVLWTGWF CCIFGDSLLE TVSEDFTCLP LFLANGAETN TAIIGTWF-- ENSTTRP00000008108/1-346 EGKVLWTGWF CCIFGDSLLE TVSEDFTCLP LFLANGAETN TAIIGTWF-- 251 300 BACU000686/1-377 RRPHKSSSSY KRPKTVESHL PTLSNIHHFW QRLEPVNHCQ KKHDHFFNNR ENSP00000348527/1-390 ---QKTFDCY FSPLAINAF- -NLSWMAAMW ------TACK MDH-YVATTE ENSBTAP00000009094/1-346 ---QKTFDCY FRPLAINAF- -NLSWMAAMW ------TACK MDH-YMATTE bmy_20125T0/1-360 ---QKTFDCY FRPLAINAF- -NLSWMAAMW ------TACK MDH-YMATTE ENSTTRP00000008108/1-346 ---QKTFDCY FRPLAINAF- -NLSWMAAMW ------TACK MDH-YMATTE 301 350 BACU000686/1-377 WFPSPPVQGM TTGPHTAQHR EEASCFSEDH TSVHQAGDQD GGCTGRSREK ENSP00000348527/1-390 FLWSVPCSPQ SLDISFAIHP EDAKALWD-- -SVHKT---- ---------- ENSBTAP00000009094/1-346 FLWSVPCSPH SLDISYAIHP EDAKALWD-- -SVHKT---- ---------- bmy_20125T0/1-360 FLWSVPCSPQ SLDISYAIHP EDAKALWD-- -SVHKT---- ---------- ENSTTRP00000008108/1-346 FLWSVPCSPQ SLDISYAIHP EDAKALWD-- -SVHKT---- ---------- 351 400 BACU000686/1-377 GGGGHGDEEQ VS------WK RKHHRDKEDE DSHKENRRKA KVAPGSTEKS ENSP00000348527/1-390 --PGEVTQEE VDLFMDCLYS HFHRHFKIHL SATRLVRVST SVASAHTD-- ENSBTAP00000009094/1-346 --PGEVTQEE VDLFMDCLYS HFHRHFKIHL SATRLVRVST SVASAHTD-- bmy_20125T0/1-360 --PGEVTQEE VDLFMDCLYS HFHRHFKIHL SATRLVRVST SVASAHTD-- ENSTTRP00000008108/1-346 --PGEVTQEE VDLFMDCLYS HFHRHFKIHL SATRLVRVST SVASAHTD-- 401 450 BACU000686/1-377 KYGKKSTHDW DTMKEGRRSS REKKHPGKHS TQEWDLWDEA ILGGSY ENSP00000348527/1-390 --GKIKIL-- ---------- -----CHKYL IGVLAYLTEL AIFQIE ENSBTAP00000009094/1-346 --GKIKIL-- ---------- -----CPKYL IGVLAYLTEL AVFQIE bmy_20125T0/1-360 --GKIKIL-- ---------- -----CHKYL IGVLAYLTEL AIFQIE ENSTTRP00000008108/1-346 --GKIKIL-- ---------- -----CHKYL IGVLAYLTEL AIFQIE