KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:12 2014 Check: 00 .. Name: ENSTTRP00000003988/1-434 Len: 439 Check: 7780 Weight: 1.00 Name: ENSP00000357838/1-439 Len: 439 Check: 3547 Weight: 1.00 Name: ENSBTAP00000009097/1-439 Len: 439 Check: 1561 Weight: 1.00 Name: bmy_07246T0/1-228 Len: 439 Check: 3856 Weight: 1.00 Name: BACU004735/1-408 Len: 439 Check: 5141 Weight: 1.00 // 1 50 ENSTTRP00000003988/1-434 MFSKLARLQT VAVL-RGFHS SVASATSVAT KKTVQGPPSS DYIFERESKY ENSP00000357838/1-439 MFSKLAHLQR FAVLSRGVHS SVASATSVAT KKTVQGPPTS DDIFEREYKY ENSBTAP00000009097/1-439 MLSKLARLQT VAGLGRGVHS SVASATSVAT KKTVQGPPSS DYIFERESKY bmy_07246T0/1-228 ---------- ---------- ---------- ---------- ---------- BACU004735/1-408 ---------- ---------- MAARNSSALR AREGLEPAVP VGVWDAQRRG 51 100 ENSTTRP00000003988/1-434 GAHNYHPLPV ALERGKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000357838/1-439 GAHNYHPLPV ALERGKGIYL WDVEGRKYFD FLSSYSAVNQ GHCHPKIVNA ENSBTAP00000009097/1-439 GAHNYHPLPV ALERGKGIYV WDVEGRKYFD FLSAYSAVNQ GHCHPKIVDA bmy_07246T0/1-228 ---------- ---------- ----GRKYFD FLSAYSAVNQ GHCHPKIVNA BACU004735/1-408 GG-------- ---RAHGIYV WDLEGRKYFD FLSAYSAVNQ GHCHPKIVNA 101 150 ENSTTRP00000003988/1-434 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX TGVEAGETAC ENSP00000357838/1-439 LKSQVDKLTL TSRAFYNNVL GEYEEYITKL FNYHKVLPMN TGVEAGETAC ENSBTAP00000009097/1-439 LKSQVDKLTL TSRAFYNNVL GEYEEYVTKL FNYHKVLPMN TGVEAGETAC bmy_07246T0/1-228 LKSQADKLTL TSRAFYNNVL GEYEEYVTKL FNYHKVLPMN TGVEAGETAC BACU004735/1-408 LKSQADKLTL TSRAFYNNVL GEYEEYVTKL FNYHKVLPMN TGVEAGETAC 151 200 ENSTTRP00000003988/1-434 KLARRWGYTV KGIPKYKAKI VFAAGNFWGR TLSAISSSTD PTSYDGFGPF ENSP00000357838/1-439 KLARKWGYTV KGIQKYKAKI VFAAGNFWGR TLSAISSSTD PTSYDGFGPF ENSBTAP00000009097/1-439 KLARKWGYTV KGIPKYKAKI VFAAGNFWGR TLSAISSSTD PTSYDGFGPF bmy_07246T0/1-228 KLARRWGYTV KGIPKYKAKI VFAAGNFWGR TLSAISSSTD PTSYDGFGPF BACU004735/1-408 KLARRWGYTV KGIPKYKAKI VFAAGNFWGR TLSAISSSTD PTSYDGFGPF 201 250 ENSTTRP00000003988/1-434 MPGFEIIPYN DLPALERALQ DPNVAAFMVE PIQGEAGVVV PDPGYLVGVR ENSP00000357838/1-439 MPGFDIIPYN DLPALERALQ DPNVAAFMVE PIQGEAGVVV PDPGYLMGVR ENSBTAP00000009097/1-439 MPGFEIIPYN DLPALERALQ DPNVAAFMVE PIQGEAGVVV PDPGYLVGVR bmy_07246T0/1-228 MPGFEIIPYN DLPALE---- ---------- ---------- ---------- BACU004735/1-408 MPGFEIIPYN DLPALERALQ DPNVAAFMVE PIQGEAGVVV PDPGYLVGVR 251 300 ENSTTRP00000003988/1-434 ELCTQHQVLF IADEVQTGLA RTGRWLAVDH ENVRPDMVLL GKALSGGLYP ENSP00000357838/1-439 ELCTRHQVLF IADEIQTGLA RTGRWLAVDY ENVRPDIVLL GKALSGGLYP ENSBTAP00000009097/1-439 ELCTQHQVLF IADEIQTGLA RTGRWLAIDH ENVRPDIVLL GKALSGGLYP bmy_07246T0/1-228 ---------- ---------- ---------- ---------- ---------- BACU004735/1-408 ELCTQHQVLF IADEIQTGLA RTGRWLAVDH ENVRPDMVLL GKALSGGLYP 301 350 ENSTTRP00000003988/1-434 VSAVLCDDEI MLTIKSGEHG FTYGG-PL-C RAIAAG--VL EEENLAENAE ENSP00000357838/1-439 VSAVLCDDDI MLTIKPGEHG STYGGNPLGC RVAIAALEVL EEENLAENAD ENSBTAP00000009097/1-439 VSAVLCDDEI MLTIKPGEHG STYGGNPLGC RVAIAALEVL EEENLAENAE bmy_07246T0/1-228 VSAVLCDDEI MLTIKPGEHG STYGGNPLGC RVAIAALEVL EEENLAENAE BACU004735/1-408 VSAVLCDDEI MLTIKPGEHG STYGGNPLGC RVAIAALEVL EEENLAENAE 351 400 ENSTTRP00000003988/1-434 KMGIILRNEL MKLPSDIVTA VRGKGLLNAI VIRETKDYDA WKVCLRLRDN ENSP00000357838/1-439 KLGIILRNEL MKLPSDVVTA VRGKGLLNAI VIKETKDWDA WKVCLRLRDN ENSBTAP00000009097/1-439 KMGIILRNEL MKLPSDVVTT VRGKGLLNAI VIRETKDCDA WKVCLRLRDN bmy_07246T0/1-228 KMGVILRNEL MKLPSDIVTA VRGKGLLNAI VIRETK---- ---------- BACU004735/1-408 KMGVILRNEL IKLPSDIVTA VRGKGLLNAI VIRETKDYDA WKVCLRLRDN 401 450 ENSTTRP00000003988/1-434 GLLAKPTHGD IIRFAPPLVI KEDEILEAVE IINKTILSF ENSP00000357838/1-439 GLLAKPTHGD IIRFAPPLVI KEDELRESIE IINKTILSF ENSBTAP00000009097/1-439 GLLAKPTHGD IIRFAPPLVI KEDEILEAVE IINKTILSF bmy_07246T0/1-228 ---------- ---------- ---------- --------- BACU004735/1-408 GLLAKPTHGD IIRFAPPLVI KEDEILEAVE IINKTILSF