KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:13 2014 Check: 00 .. Name: ENSTTRP00000007864/1-840 Len: 1024 Check: 4022 Weight: 1.00 Name: ENSP00000313603/1-845 Len: 1024 Check: 2003 Weight: 1.00 Name: ENSBTAP00000009098/1-845 Len: 1024 Check: 4489 Weight: 1.00 Name: bmy_16291T0/1-885 Len: 1024 Check: 6950 Weight: 1.00 Name: BACU015920/1-988 Len: 1024 Check: 3454 Weight: 1.00 // 1 50 ENSTTRP00000007864/1-840 ---------- -------MPK GPKQQPPEPE WIGDG----- ---------- ENSP00000313603/1-845 ---------- -------MPK APKQQPPEPE WIGDG----- ---------- ENSBTAP00000009098/1-845 ---------- -------MPK GPKQQPPEPE WIGDG----- ---------- bmy_16291T0/1-885 ---------- ---------- ---------- ---------- ---------- BACU015920/1-988 MKARRACGPS GGGVGSAGVE SPPGSGPQAA GTGNSTWRRQ DCRNCHRDAE 51 100 ENSTTRP00000007864/1-840 ---------- ---------- ---------- ---------- ---------- ENSP00000313603/1-845 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009098/1-845 ---------- ---------- ---------- ---------- ---------- bmy_16291T0/1-885 ---------- ---------- ---------- ---------- ---------- BACU015920/1-988 GAQAAAAGAR VDRGRRDHEP HSSITLVTQY GDQILKCVQD GGHRLSKDRH 101 150 ENSTTRP00000007864/1-840 ---------- --ETTSLTDK VVKKGKKDRK TKKTFFEELA VEDRQAGEEK ENSP00000313603/1-845 ---------- --ESTSPSDK VVKKGKKDKK IKKTFFEELA VEDKQAGEEE ENSBTAP00000009098/1-845 ---------- --ETTSPTDK VVKKGKKDKK TKKTFFEELA VEDKQAGEEE bmy_16291T0/1-885 ---------- ---------- ---------- ----FFEELA VEDRQAGEEK BACU015920/1-988 KHAWELTKER GEASVQNTDK VVKKGKKDRK TKKTFFEELA VEDRQAGEEK 151 200 ENSTTRP00000007864/1-840 KVLKEKEQQQ QQQQ------ ---------- ---------- ---------- ENSP00000313603/1-845 KVLKEKEQQQ QQQQ------ ---------- ---------- ---------- ENSBTAP00000009098/1-845 KVLKEKEQQQ QQQQQQ---- ---------- ---------- ---------- bmy_16291T0/1-885 KVLKEKEQQQ QQQQQQQVQM SGPHRYMEAS MGPPAPLQPA LGHSADGELS BACU015920/1-988 KVLKEKEQQQ QQQQQQQVQV SGPHRYMEAS MGPPAPLQPA LGHSADGELS 201 250 ENSTTRP00000007864/1-840 ---------- --------QQ QKKKRDARKS RRKKDVDDDG EEKELMERLK ENSP00000313603/1-845 ---------- --------QQ QKKKRDTRKG RRKKDVDDDG EEKELMERLK ENSBTAP00000009098/1-845 ---------- --------QQ QKKKRDTRKG RRKKDVDDDG EEKELMERLK bmy_16291T0/1-885 LEQRYSSGLG FILSLFGFQQ QKKKRDTRKS RRKKDVDDDG EEKELIERLK BACU015920/1-988 LEQRYSSGLG FILSLFGFQQ QKKKRDTRKS RRKKDVDDDG EEKELMERLK 251 300 ENSTTRP00000007864/1-840 KLSVPASDEE DEVPAPVPRG GKKTKGGNVF AALIQDQSEE EEEEEEKHPP ENSP00000313603/1-845 KLSVPTSDEE DEVPAPKPRG GKKTKGGNVF AALIQDQSE- EEEEEEKHPP ENSBTAP00000009098/1-845 KLSVPASDEE DEVPAPVPRG GKKTKGGNVF AALIQDQSED EEEEEEKHPP bmy_16291T0/1-885 KLSVPASDEE EEVPAPVPRG GKKTKGGNVF AALIQDQSEE EEEEEEKHPP BACU015920/1-988 KLSVPASDEE EEVPAPVPRG GKKTKGGNVF AALIQDQSEE EEEEEEKHPP 301 350 ENSTTRP00000007864/1-840 KPAKPEKNRI NKAVSQEQQP GLKGKKGKEE KSKGKAKPQN KFAALDN-DG ENSP00000313603/1-845 KPAKPEKNRI NKAVSEEQQP ALKGKKGKEE KSKGKAKPQN KFAALDN-EE ENSBTAP00000009098/1-845 KPAKPEKNRI NKAVSQEQQP GLKGKKTKEE KSKGKAKPQN KFAALESEEE bmy_16291T0/1-885 KPAKPEKNRI NKAVSQEQQP GLKGKKGKEE KSKGKAKPQN KFAALDN-EE BACU015920/1-988 KPAKPEKNRI NKAVSQEQQP GLKGKKGKEE KSKGKAKPQN KFAALDN-EE 351 400 ENSTTRP00000007864/1-840 EENEEEITKE EEPPKQGKEK AKKAEQGSEE --EGEEEEEE -GESKADGPF ENSP00000313603/1-845 EDKEEEIIKE KEPPKQGKEK AKKAEQGSEE EGEGEEEEEE GGESKADDPY ENSBTAP00000009098/1-845 EEDEEEVTKE KEPPKQGKEK AKKAEQGSE- --EGEEEEEE -GESKADDPY bmy_16291T0/1-885 EEDEEEITEE EEPPKQGKEK AKKAEQGSEE --EGEEEEEE -GESKADDPY BACU015920/1-988 EEDEEEITKE EEPPKQGKEK AKKAEQGSEE --EGEEEEEE -GESKADDPY 401 450 ENSTTRP00000007864/1-840 AHLSKKEKKK LKKQMEYERQ VASLKAASAA ENDFSVSQAE VSSRQAMLEN ENSP00000313603/1-845 AHLSKKEKKK LKKQMEYERQ VASLKAANAA ENDFSVSQAE MSSRQAMLEN ENSBTAP00000009098/1-845 AHLSKKEKKK LKKQMEYERQ VASLKAANAA ENDFSVSQAE VSSRQAMLEN bmy_16291T0/1-885 AHLSKKEKKK LKKQMEYERQ VASLKAANAA ENDFSVSQAE VSSRQAMLEN BACU015920/1-988 AHLSKKEKKK LKKQMEYERQ VASLKAANAA ENDFSVSQAE VSSRQAMLEN 451 500 ENSTTRP00000007864/1-840 ASDIKLEKFS ISAHGKELFV NADLYIVASR RYGLVGPNGK GKTTLLKHIA ENSP00000313603/1-845 ASDIKLEKFS ISAHGKELFV NADLYIVAGR RYGLVGPNGK GKTTLLKHIA ENSBTAP00000009098/1-845 ASDIKLEKFS ISAHGKELFV NADLYIVAGR RYGLVGPNGK GKTTLLKHIA bmy_16291T0/1-885 ASDIKLEKFS ISAHGKELFV NADLYIVASR RYGLVGPNGK GKTTLLKHIA BACU015920/1-988 ASDIKLEKFS ISAHGKELFV NADLYIVASR RYGLVGPNGK GKTTLLKHIA 501 550 ENSTTRP00000007864/1-840 NRALSIPPNI DVLLCEQEVV ADETPAVQAV LRADTKRLKL LEEERQLQGQ ENSP00000313603/1-845 NRALSIPPNI DVLLCEQEVV ADETPAVQAV LRADTKRLKL LEEERRLQGQ ENSBTAP00000009098/1-845 NRALSIPPNI DVLLCEQEVV ADETPAVQAV LRADTKRLKL LEEERRLQGQ bmy_16291T0/1-885 NRALSIPPNI DVLLCEQEVV ADETPAVQAV LRADTKRLKL LEEERQLQGQ BACU015920/1-988 NRALSIPPNI DVLLCEQEVV ADETPAVQAV LRADTKRLKL LEEEQQLQGQ 551 600 ENSTTRP00000007864/1-840 LEQGDDAAAE RLEKVYEELR ATGAAAAEAK ARRILAGLGF DPEMQNRPTQ ENSP00000313603/1-845 LEQGDDTAAE RLEKVYEELR ATGAAAAEAK ARRILAGLGF DPEMQNRPTQ ENSBTAP00000009098/1-845 LEQGDDTAAE RLEKVYEELR ATGAAAAEAK ARRILAGLGF DPEMQNRPTQ bmy_16291T0/1-885 LEQGDDAAAE RLEKVYEELR ATGAAAAEAK ARRILAGLGF DPEMQNRPTQ BACU015920/1-988 LEQGDDAAAE RLEKVYEELR ATGAAAAEAK ARRILAGLGF DPEMQNRPTQ 601 650 ENSTTRP00000007864/1-840 KFSGGWRMRV SLARALFMEP TLLMLDEPTN HLDLNAVIWL NNYLQGWRKT ENSP00000313603/1-845 KFSGGWRMRV SLARALFMEP TLLMLDEPTN HLDLNAVIWL NNYLQGWRKT ENSBTAP00000009098/1-845 KFSGGWRMRV SLARALFMEP TLLMLDEPTN HLDLNAVIWL NNYLQGWRKT bmy_16291T0/1-885 KFSGGWRMRV SLARALFMEP TLLMLDEPTN HLDLNAVIWL NNYLQGWRKT BACU015920/1-988 KFSGGWRMRV SLARALFMEP TLLMLDEPTN HLDLNAVIWL NNYLQGWRKT 651 700 ENSTTRP00000007864/1-840 LLIVSHDQGF LDDVCTDIIH LDAQRLHYYR GNYMTFKKMY QQKQKELLKQ ENSP00000313603/1-845 LLIVSHDQGF LDDVCTDIIH LDAQRLHYYR GNYMTFKKMY QQKQKELLKQ ENSBTAP00000009098/1-845 LLIVSHDQGF LDDVCTDIIH LDAQRLHYYR GNYMTFKKMY QQKQKELLKQ bmy_16291T0/1-885 LLIVSHDQGF LDDVCTDIIH LDAQRLHYYR GNYMTFKKMY QQKQKELLKQ BACU015920/1-988 LLIVSHDQGF LDDVCTDIIH LDAQRLHYYR GNYMTFKKMY QQKQKELLKQ 701 750 ENSTTRP00000007864/1-840 YEKQEKKLKE LKAGGKSTKQ AEKQTKEALT RKQQKCRRKN QDEESQEAPE ENSP00000313603/1-845 YEKQEKKLKE LKAGGKSTKQ AEKQTKEALT RKQQKCRRKN QDEESQEAPE ENSBTAP00000009098/1-845 YEKQEKKLKE LKAGGKSTKQ AEKQTKEALT RKQQKCRRKN QDEESQEAPE bmy_16291T0/1-885 YEKQEKKLKE LKAGGKSTKQ AEKQTKEALT RKQQKCRRKN QDEESQDAPE BACU015920/1-988 YEKQEKKLKE LKAGGKSTKQ AEKQTKEALT RKQQKCRRKN QDEESQEAPE 751 800 ENSTTRP00000007864/1-840 LL--SGEYTV RFTFPDPPPL SP--VGLHXX XXXXXXXXXX XXXXXXXXXX ENSP00000313603/1-845 LLKRPKEYTV RFTFPDPPPL SPPVLGLHGV TFGYQGQKPL FKNLDFGIDM ENSBTAP00000009098/1-845 LLKRPKEYTV RFTFPDPPPL SPPVLGLHGV TFGYEGQKPL FKNLDFGIDM bmy_16291T0/1-885 LLKRPREYTV RFTFPDPPPL SPPVLGLHGV TFGYEGQKPL FKNLDFGIDM BACU015920/1-988 LLKRPREYTV RFTFPDPPPL SPPVLGLHGV TFGYEGQKPL FKNLDFGIDM 801 850 ENSTTRP00000007864/1-840 XXXXXXHVGP NGVGKSTLLL LLTGKLTPTR GEMRKNHRL- ---------- ENSP00000313603/1-845 DSRICI-VGP NGVGKSTLLL LLTGKLTPTH GEMRKNHRL- ---------- ENSBTAP00000009098/1-845 DSRICI-VGP NGVGKSTLLL LLTGKLTPTR GEMRKNHRL- ---------- bmy_16291T0/1-885 DSRICI-VGP NGVGKSTLLL LLTGKLTPTR GEMRKNHRLV SGFGDQGVRG BACU015920/1-988 DSRICI-VGP NGVGKSTLLL LLTGKLTPTR GEMRKNHRL- ---------- 851 900 ENSTTRP00000007864/1-840 ---------- -------KIG FFNQQYAEQL RMEETPTEYL QRGFNLPYQD ENSP00000313603/1-845 ---------- -------KIG FFNQQYAEQL RMEETPTEYL QRGFNLPYQD ENSBTAP00000009098/1-845 ---------- -------KIG FFNQQYAEQL RMEETPTEYL QRGFNLPYQD bmy_16291T0/1-885 RQRKYDFDRP PPSPLGQKIG FFNQQYAEQL HMEETPTEYL QRGFNLPYQD BACU015920/1-988 ---------- -------KIG FFNQQYAEQL HMEETPTEYL QQGFNLPYQD 901 950 ENSTTRP00000007864/1-840 ARKCLGRFGL ESHAHTIQIC KLSGGQKARV VFAELSCREP DVLILDEPTN ENSP00000313603/1-845 ARKCLGRFGL ESHAHTIQIC KLSGGQKARV VFAELACREP DVLILDEPTN ENSBTAP00000009098/1-845 ARKCLGRFGL ESHAHTIQIC KLSGGQKARV VFAELACREP DVLILDEPTN bmy_16291T0/1-885 ARKCLGRFGL ESHAHTIQIC KLSGGQKARV VFAELACREP DVLILDEPTN BACU015920/1-988 ARKCLGRFGL ESHAHTIQIC KLSGGQKARV VFAELACREP DVLILX---X 951 1000 ENSTTRP00000007864/1-840 NLDIESIDAL GEAINEYKGA VIVVSHDARL ITETSCQLWV VEEQSVSQID ENSP00000313603/1-845 NLDIESIDAL GEAINEYKGA VIVVSHDARL ITETNCQLWV VEEQSVSQID ENSBTAP00000009098/1-845 NLDIESIDAL GEAINEYKGA VIVVSHDARL ITETNCQLWV VEEQSVSQID bmy_16291T0/1-885 NLDIESIDAL GEAINEYKGA VIVVSHDARL ITETNCQLWV VEEQSVSQID BACU015920/1-988 XLDIESIDAL GEAINEYKGA VIVVSHDARL ITETNCQLWV VEEQSVSQID 1001 1050 ENSTTRP00000007864/1-840 GDFEDYKREV LEALGEVMVS RPRE ENSP00000313603/1-845 GDFEDYKREV LEALGEVMVS RPRE ENSBTAP00000009098/1-845 GDFEDYKREV LEALGEVMVS RPRE bmy_16291T0/1-885 GDFEDYKREV LEALGEVVVN RPRE BACU015920/1-988 GDFEDYKREV LEALGEVVVN RPRE