KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:15 2014 Check: 00 .. Name: ENSP00000365694/1-940 Len: 943 Check: 257 Weight: 1.00 Name: ENSBTAP00000009104/1-924 Len: 943 Check: 7115 Weight: 1.00 Name: ENSTTRP00000007870/1-906 Len: 943 Check: 7993 Weight: 1.00 Name: bmy_16292T0/1-925 Len: 943 Check: 7698 Weight: 1.00 Name: BACU015919/1-785 Len: 943 Check: 9788 Weight: 1.00 // 1 50 ENSP00000365694/1-940 MGSGPIDPKE LLKGLDSFLN RDGEVKSVDG ISKIFSLMKE ARKMVSRCTY ENSBTAP00000009104/1-924 MGSGPIDPKE LLKGLDSFLN RDGEVKSVDG ISKIFSLMKE ARKMVSRCTY ENSTTRP00000007870/1-906 MGSGPIDPKE LLKGLDSFLN RDGEVKSVDG ISKIFSLMKE ARKMVSRCTY bmy_16292T0/1-925 MGSGPIDPKE LLKGLDSFLN RDGEVKSVDG ISKIFSLMKE ARKMVSRCTY BACU015919/1-785 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000365694/1-940 LNILLQTRSP EILVKFIDVG GYKLLNNWLT YSKTTNNIPL LQQILLTLQH ENSBTAP00000009104/1-924 LNILLQTRSP EVLIKFIDVG GYKLLNNWLT YSKTTNNIPL LQQILLTLQH ENSTTRP00000007870/1-906 LNILLQTRSP EILVKFIDVG GYKLLNNWLT YSKTTNNIPL LQQILLTLQH bmy_16292T0/1-925 LNILLQTRSP EILVKFIDVG GYKLLNNWLT YSKTTNNIPL LQQILLTLQH BACU015919/1-785 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000365694/1-940 LPLTVDHLKQ NNTAKLVKQL SKSSEDEELR KLASVLVSDW MAVIRSQSST ENSBTAP00000009104/1-924 LPLTVDHLKQ NNTAKLVKQL SKSSDDEELR KLASVLVSDW MAVIRSQSST ENSTTRP00000007870/1-906 LPLTVDHLKQ NNTAKLVKQL SKSSEDEELR KLASVLVSDW MAVIRSQSST bmy_16292T0/1-925 LPLTVDHLKQ NNTAKLVKQL SKSSEDEELR KLASVLVSDW MAVIRSQSST BACU015919/1-785 ---------- ---------- ---------- ---------- MAVIRSQSST 151 200 ENSP00000365694/1-940 QPAEKDKKKR KDEGKSRTTL PERPLTEVKA ETRAEEAPEK KREKPKSLRT ENSBTAP00000009104/1-924 QPAEKDKKKR KEEGKSRTTP PERPVTEVKA ETRAEEAPEK KREKPKSLRT ENSTTRP00000007870/1-906 QPAEKDKKKR KEEGKSRTTP PERPLTEVKA ETRAEEAPEK KREKPKSLRT bmy_16292T0/1-925 QPAEKDKKKR KEEGKNRTTP PERPLTEVKA ETRAEEAPEK KREKPKSLRT BACU015919/1-785 QPAEKDKKKR KEEGKNRTTP PERPLTEVKA ETRAEEAPEK KREKPKSLRT 201 250 ENSP00000365694/1-940 TAPSHAKFRS TGLELETPSL VPVKKNASTV VVSDKYNLKP IPLKRQSNVA ENSBTAP00000009104/1-924 TAPSHAKFRS TGLELETPSL VPVKKNASAV VVSDKYNLKP IPLKRQSSAA ENSTTRP00000007870/1-906 TAPSHAKFRS TGLELETPSL VPVKKNASAV VVSDKYNLKP IPLKRQSSTA bmy_16292T0/1-925 TAPSHAKFRS TGLELETPSL VPVKKNASAV VVSDKYNLKP IPLKRQSSAA BACU015919/1-785 TAPSHAKFRS TGLELETPSL VPVKKNASAV VVSDKYNLKP IPLKRQSSAA 251 300 ENSP00000365694/1-940 APGDATPPAE KKYKPLNTTP NATKEIKVKI IPPQPMEGLG FLDALNSAPV ENSBTAP00000009104/1-924 APGDAAPPAE KKYKPLNTTP NATKEIKVKI IPPQPMEGLG FLDALNSAPV ENSTTRP00000007870/1-906 APGDAAPPAE KKYKPLNTTP NATKEIKVKI IPPQPMEGLG FLDALNSAPV bmy_16292T0/1-925 APGDAAPPAE KKYKPLNTTP NATKEIKVKI IPPQPMEGLG FLDALNSAPV BACU015919/1-785 APGDAAPPAE KKYKPLNTTP NATKEIKVKI IPPQPMEGLG FLDALNSAPV 301 350 ENSP00000365694/1-940 PGIKIKKKKK VLSPTAAKPS PFEGKTSTEP STAKPSSPEP APPSEAMDAD ENSBTAP00000009104/1-924 PGIKIKKKKK VLSPTAAKPS PFEGKTSTEP SVAKPSSPEP APP-ETMDTE ENSTTRP00000007870/1-906 PGIKIKKKKK VLSPTAAKPS PFEGKTSTEP STAKPSSPEP APPSEAMDTE bmy_16292T0/1-925 PGIKIKKKKK VLSPTAAKPS PFEGKTSTEP STAKPSSPEP APPSEAMDTE BACU015919/1-785 PGIKIKKKKK VLSPTAAKPS PFEGKTSTEP STAKPSSPEP APPSEAMDTE 351 400 ENSP00000365694/1-940 RPGTPVPPVE VPELMDTASL EPGALDAKPV ESPGDPNQLT RKGRKRKSVT ENSBTAP00000009104/1-924 RPGTPVPPVE VPELMDTASL EPGALDVKPV ESPSDPSQLT RKGRKRKTVT ENSTTRP00000007870/1-906 RPGTPVPPVE VPELMDTASL EPGALDAKPV ESPGDPSQLT RKGRKRKTVT bmy_16292T0/1-925 RPGTPVPPVE VPELMDTASL EPGALDAKPV ESPGDPSQLT RKGRKRKTVT BACU015919/1-785 RPGTPVPPVE VPELMDTASL EPGALDAKPV ESPGDPSQLT RKGRKRKTVT 401 450 ENSP00000365694/1-940 WPEEGKLREY FYFELDETER VNVNKIKDFG EAAKREILSD RHAFETARRL ENSBTAP00000009104/1-924 WPEEGKLREY FYFELDETER VNVNKIKDFG EAAKREILSD RHAFETARRL ENSTTRP00000007870/1-906 WPEEGKLREY FYFELDETER VNVNKIKDFG EAAKREILSD RHAFETARRL bmy_16292T0/1-925 WPEEGKLREY FYFELDETER VNVNKIKDFG EAAKREILSD RHAFETARRL BACU015919/1-785 WPEEGKLREY FYFELDETER VNVNKIKDFG EAAKREILSD RHAFETARRL 451 500 ENSP00000365694/1-940 SHDNMEEKVP WVCPRPLVLP SPLVTPGSNS QERYIQAERE KGILQELFLN ENSBTAP00000009104/1-924 SHDNMEEKVP WVCPRPLVLP SPLVTPGSNS QERYIQAERE KGILQELFLN ENSTTRP00000007870/1-906 SHDNMEEKVP WVCPRPLVLP SPLVTPGSNS QERYIQAERE KGILQELFLN bmy_16292T0/1-925 SHDNMEEKVP WVCPRPLVLP SPLVTPGSNS QERYIQAERE KGILQELFLN BACU015919/1-785 SHDNMEEKVP WVCPRPLVLP SPLVTPGSNS QERYIQAERE KGILQELFLN 501 550 ENSP00000365694/1-940 KESPHEPDPE PYEPIPPKLI PLDEECSMDE TPYVETLEPG GSGGSPDGAG ENSBTAP00000009104/1-924 KESPHEPDPE PYEPIPPKLI PLDEECSMDE TPYVETLEPG GAGGSPDGAG ENSTTRP00000007870/1-906 KESPHEPDPE PYEPVPPKLI PLDEECSMDE TPYVETLEPG GTCGSPDGAG bmy_16292T0/1-925 KESPHEPDPE PYEPIPPKLI PLDEECSMDE TPYVETLEPG GTGGSPDGAG BACU015919/1-785 KESPHEPDPE PYEPIPPKLI PLDEECSMDE TPYVETLEPG GTGGSPDGAG 551 600 ENSP00000365694/1-940 GSKLPPVLAN LMGSMGAGKG PQGPGGGGIN VQEILTSIMG SPNSHPSEEL ENSBTAP00000009104/1-924 GSKLPPVLAN LMGSMGAGKS PQGPGGGGIN VQEILTSIMG SPNSHPSEEL ENSTTRP00000007870/1-906 GSKLPPVLAN LMGSMGAGKS PQGPGGGGIN VQEILTSIMG SPNSHPSE-- bmy_16292T0/1-925 GSKLPPVLAN LMGSMGAGKS PQGPGGGGIN VQEILTSIMG SPNSHPSEEL BACU015919/1-785 SSKLPPVLAN LMGSMGAGKS PQGPGGGGIN VQEILTSIMG SPNSHPSEEL 601 650 ENSP00000365694/1-940 LKQPDYSDKI KQMLVPHGLL GPGPIANGFP PGGPGGPKGM QHFPPGPGGP ENSBTAP00000009104/1-924 LKQADYSDKI KQMLVPHGLL GPGPIANGFP PGGPGGPKGM QHFPPGPGGP ENSTTRP00000007870/1-906 LLKPDYSDKI -QMLVPHGLL GPGPIANGFP PGGPGGPKGM QHFPPGPGGP bmy_16292T0/1-925 LKQPDYSDKI KQMLVPHGLL GPGPIANGFP PGGPGGPKGM QHFPPGPGGP BACU015919/1-785 LKQPDYSDKI KQMLVPHGLL GPGPIANGFP PGGPGGPKGM QHFPPGPGGP 651 700 ENSP00000365694/1-940 MPGPH---GG PGGPVGPRLL GPPPPPRGGD PFWDGPGDPM RGGPMRGGPG ENSBTAP00000009104/1-924 MPGPHGGPGG PGGPVGPRLL GPPPPPRGGD PFWDGPGDPM RGGPMRGGPG ENSTTRP00000007870/1-906 MPGPHGGPGG PGGPVGPRLL GPPPPPRGGD PFWDGPGDPM RGGPMRGGPG bmy_16292T0/1-925 MPGPHGGPGG PGGPVGPRLL GPPPPPRGGD PFWDGPGDPM RGGPMRGGPG BACU015919/1-785 MPGPHGGPGG PGGPVGPRLL GPPPPPRGGD PFWDGPGDPM RGGPMRGGPG 701 750 ENSP00000365694/1-940 PGPGPYHRGR GGRGGNEPPP PPPPFRGARG GRSGGGPPNG RGGPGGGMVG ENSBTAP00000009104/1-924 PGPGPYHRGR GGRGGNEPPP PPPPFRGARG GRSGGGPPNG RGGPGGGMVG ENSTTRP00000007870/1-906 P--GPYHRGR GGRGGSEPPP PPPPFRGARG GRSGGGPPNG RGGPGGGMVG bmy_16292T0/1-925 PGPGPYHRGR GGRGGNEPPP PPPPFRGARG GRSGGGPPNG RGGPGGGMVG BACU015919/1-785 PGPGPYHRGR GGRGGNEPPP PPPPFRGARG GRSGGGPPNG RGGPGGGMVG 751 800 ENSP00000365694/1-940 GGGHRPHEGP GGGMGNSSGH RPHEGPGGGM GSGHRPHEGP GGSMGGGGGH ENSBTAP00000009104/1-924 GGGHRPHEGP GGGMNSGSGH RPHEGPGSGM GGGHRPHEGP GGSM--GGGH ENSTTRP00000007870/1-906 GGGHRPHEGP GGGMSSGSGH RPHEGPGSGM GGGHRP---- ---------- bmy_16292T0/1-925 GGGHRPHEGP GGGMSSGSGH RPHEGPGSGM GGGHRPHEGP GGSM--GGGH BACU015919/1-785 GGGHRPHEGP GGGMSGGSGH RPHEGPGSGM GGGHRPHEGP GGSM--GGGH 801 850 ENSP00000365694/1-940 RPHEGPGGGI SGGSGHRPHE GPGGGMGAGG GHRPHEGPGG SMGGSGGHRP ENSBTAP00000009104/1-924 RPHEGPGGGM GGGSGHRPHE GPGGGMGAGG ---------- ------GHRP ENSTTRP00000007870/1-906 --HEGPGGGM GGGSGHRPHE GPGGGMGAGG ---------- ------GHRP bmy_16292T0/1-925 RPHEGPGGGM GGGSGHRPHE GPGGGMGAGG ---------- ------GHRP BACU015919/1-785 RPHEGPGGGM GGGSGHRPHE GPGGGMGAGG ---------- ------GHRP 851 900 ENSP00000365694/1-940 HEGPGHGGPH GHRPHDVPGH RGHDHRGPPP HEHRGHDGPG HGGGGHRGHD ENSBTAP00000009104/1-924 HEGPGHGGPH GHRPHDVPGH RGHDHRGPPP HEHRGHDGPG HGGGGHRGHD ENSTTRP00000007870/1-906 HEGPGHGGPH GHRPHDGPGH RGHDHRGPPP HEHRGHDGPS HGGGGHRGHD bmy_16292T0/1-925 HEGPGHGGPH GHRPHDGPGH RGHDHRGPPP HEHRGHDGPG HGGGGHRGHD BACU015919/1-785 HEGPGHGGPH GHRPHDGPGH RGHDHRGPPP HEHRGHDGPG HGGGGHRGHD 901 950 ENSP00000365694/1-940 GGHSHGGDMS NRPVCRHFMM KGNCRYENNC AFYHPGVNGP PLP ENSBTAP00000009104/1-924 GGHSHGGDMS NRPVCRHFMM KGNCRYENNC AFYHPGVNGP PLP ENSTTRP00000007870/1-906 GGHSHGGDMS NRPVCRHFMM KGNCRYENNC AFYHPGVNGP PLP bmy_16292T0/1-925 GGHSHGGDMS NRPVCRHFMM KGNCRYENNC AFYHPGVNGP PLP BACU015919/1-785 GGHSHGGDMS NRPVCRHFMM KGNCRYENNC AFYHPGVNGP PLP