KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:18 2014 Check: 00 .. Name: BACU016509/1-555 Len: 691 Check: 4532 Weight: 1.00 Name: bmy_15172T0/1-317 Len: 691 Check: 7798 Weight: 1.00 Name: ENSP00000376250/1-482 Len: 691 Check: 8783 Weight: 1.00 Name: ENSTTRP00000008084/1-612 Len: 691 Check: 4540 Weight: 1.00 Name: ENSBTAP00000009121/1-306 Len: 691 Check: 3710 Weight: 1.00 // 1 50 BACU016509/1-555 ---------- ---------- ---------- ---------- ---------- bmy_15172T0/1-317 ---------- ---------- ---------- ---------- ---------- ENSP00000376250/1-482 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008084/1-612 SALASHSRLR LQTCSSPPPC PPAGLSVSSL PPYWPARVHF RARGIWYRSG ENSBTAP00000009121/1-306 ---------- ---------- ---------- ---------- ---------- 51 100 BACU016509/1-555 ---------- ---------- ---------- ---------- ---------- bmy_15172T0/1-317 ---------- ---------- ---------- ---------- ---------- ENSP00000376250/1-482 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008084/1-612 PGARSRWLRR GSWAASLLRR GPSPAAFVAS PCPGPLCPPA RARCRPDFAP ENSBTAP00000009121/1-306 ---------- ---------- ---------- ---------- ---------- 101 150 BACU016509/1-555 ---------- ---------- ---------- ------MVFG SRVYMMWKSV bmy_15172T0/1-317 ---------- ---------- ---------- ------MSLP VCPPPSSSAV ENSP00000376250/1-482 ---------- ---------- ---------- ---MAEVSID QSKLPGVKEV ENSTTRP00000008084/1-612 GRALLLLLLR SGPRSVPTAA GKREAKQPGA RANMAEVTID QSKLPGVKEV ENSBTAP00000009121/1-306 ---------- ---------- ---------- ---MAEVTID QSKLPGVKEV 151 200 BACU016509/1-555 CRDFAVLEDH TLAHSLQEQE IEHHLASNVQ RNRLVQHDLQ VAKQLQEEDL bmy_15172T0/1-317 CRDFAVLEDH TLAHSLQEQE IEHHLASNVQ RNRLVQHDLQ VAKQLQEEDL ENSP00000376250/1-482 CRDFAVLEDH TLAHSLQEQE IEHHLASNVQ RNRLVQHDLQ VAKQLQEEDL ENSTTRP00000008084/1-612 CRDFAVLEDH TLAHSLQEQE IEHHLASNVQ RNRLVQHDLQ VAKQLQEEDL ENSBTAP00000009121/1-306 CRDFAVLEDH TLAHSLQEQE IEHHLASNVQ RNRLVQHDLQ VAKQLQEEDL 201 250 BACU016509/1-555 KAQAQLQKRY KDLEQQDCEI AQEIQEKLAI EAERRRIQEK KDEDIARLLQ bmy_15172T0/1-317 KAQAQLQKRY KDLEQQDCEI AQEIQEKLAI EAERRRIQEK KDEDIARLLQ ENSP00000376250/1-482 KAQAQLQKRY KDLEQQDCEI AQEIQEKLAI EAERRRIQEK KDEDIARLLQ ENSTTRP00000008084/1-612 KAQAQLQKRY KALEQQDCEI AQEIQEKLAI EAERRRIQEK KDEDIARLLQ ENSBTAP00000009121/1-306 KAQAQLQKRY KDLEQQDCEI AQEIQEKLAI EAERRRIQEK KDEDIARLLQ 251 300 BACU016509/1-555 EKELQEEKKR KKHFPESPGA NAYGDSHYYE DGDQPRSRRA RELGSGFSKS bmy_15172T0/1-317 EKELQEEKKR KKHFPESPGA NAYGDSYYYE DG-------- ---------- ENSP00000376250/1-482 EKELQEEKKR KKHFPEFPAT RAYADSYYYE DGDQPGSRRA RELGSGFSRP ENSTTRP00000008084/1-612 EKELQEEKKR KKHFPESPGA NAYGGSYSYE DGDQPRSRRA RELGSGFSKS ENSBTAP00000009121/1-306 EKELQEEKKR KKHFPESSGV SAYGDSYYYE DG-------- ---------- 301 350 BACU016509/1-555 YRPQSEEKTV KQRKETSKHP QENLEELEEH CSSEKPLSSS SLGKVRDDPQ bmy_15172T0/1-317 ---------- ---------- ---------- ---------- ---------- ENSP00000376250/1-482 CRLQRDGKTV KHKKEKPEHP LENLEEPEQH CSSKRSLSSS SSGKGRDNPH ENSTTRP00000008084/1-612 YRLQSEEKTV KQRKEKSKPP QENLEELEEH RSSEKPLSSS SLGKTRDDPR ENSBTAP00000009121/1-306 ---------- ---------- ---------- ---------- ---------- 351 400 BACU016509/1-555 INTEQPERKR SGHERPRRPP LPKISGEVFL STESEDWEAK HSHRTRNWEK bmy_15172T0/1-317 ---------- ---------- ---------- ---------- ---------- ENSP00000376250/1-482 INNEQHERKR STQERPRRPL LPTISGEVFL STECDDWETK INHQTRNWEK ENSTTRP00000008084/1-612 INTEQPERKR SGHERLRRPP LPKISGEVFL STESEDWEAN HRHRTRNWEK ENSBTAP00000009121/1-306 ---------- ---------- ---------- ---------- ---------- 401 450 BACU016509/1-555 QSRHQDQLSP EASQKAGLHC KEAAYRSDHG QGEHRERKHR PRAPPFSESE bmy_15172T0/1-317 ---------- ---------- ---------- ---------- ---------- ENSP00000376250/1-482 QSRHQDRLSP KSSQKAGLHC KEVVYGRDHG QGEHRKRRHR PRTPPFSESE ENSTTRP00000008084/1-612 QSRHQDQLSP KASQKAGLHC QEAVYRSNHG QGEHRERKHR PRAPPISESE ENSBTAP00000009121/1-306 ---------- ---------- ---------- ---------- ---------- 451 500 BACU016509/1-555 ERHQLRDAGT KPRVMKEAVS TPSRVTNRNQ EWYDAEIARK LQEEEILATQ bmy_15172T0/1-317 --------GT KPRVMKEAVS TPSRVANRDQ EWYDAEIARK LQEEEILATQ ENSP00000376250/1-482 EQLHLHDAGM KPRVMKEAVS TPSRMAHRDQ EWYDAEIARK LQEEELLATQ ENSTTRP00000008084/1-612 ARHPLHDAGM KPRGMKEVVS TPSRVTNRDQ EWNDAEIARK LQEEEILATQ ENSBTAP00000009121/1-306 --------GM KPRVMKEAVS TPSRVTHRDQ EWYDAEIARK LQEEEILATQ 501 550 BACU016509/1-555 VDMRAAQVAQ DEEIARLLMA EEKKAYKKAR EREKSSLDKR KHDPEWKPKT bmy_15172T0/1-317 VDTRAAQVAQ DEEIARLLMA EEKKAYKKAR EREKSSLDKR KHDPEWKPKT ENSP00000376250/1-482 VDMRAAQVAQ DEEIARLLMA EEKKAYKKAK EREKSSLDKR KQDPEWKPKT ENSTTRP00000008084/1-612 VDMRAAQVAQ DEEIARLLMA EEKKAYKKAR EREKSSLDKR KHDPEWKPKT ENSBTAP00000009121/1-306 VDMRAAQVAQ DEEIARLLMA EEKKAYKKAR EREKSSLDKR KHDPEWKPKT 551 600 BACU016509/1-555 AKSAHSKSKE SDEPHHSKND RPARPLPPTM TEAEDLDYTH FTNQHNSTRH bmy_15172T0/1-317 AKSAHSKSKE SDEPHHSKND RPARPLPPTM TEAEDLDYTH FTNQHNSTRH ENSP00000376250/1-482 AKAANSKSKE SDEPHHSKNE RPARPPPPIM TDGEDADYTH FTNQQSSTRH ENSTTRP00000008084/1-612 AKSAHSKSRE SDEHHHSKND RPARPLPPTM TEAEDLDYTH FTNQHNSTRH ENSBTAP00000009121/1-306 AKSAHSKSKE SDEPHRSKND RPARPPPPPM TDAEGLDFTS SGNQHNSTRH 601 650 BACU016509/1-555 FSKSESSHKG LRVNSFLFMQ HKSGFLISNH LTFVCPLAVL LSLLMTSLQT bmy_15172T0/1-317 FSKSESSHKG ---------- ---------- ---------- ---------- ENSP00000376250/1-482 FSKSESSHKG ---------- ---------- ---------- ---------- ENSTTRP00000008084/1-612 F-KSESSH-- ---------- ---------- ---------- ---------- ENSBTAP00000009121/1-306 YSKSESSHKG ---------- ---------- ---------- ---------- 651 700 BACU016509/1-555 FGDSDYLPDG PFLLHSRPWV FSVLLRHSPG PWHFQSPLCR S bmy_15172T0/1-317 ---------- ------EP-- ---RTSSSSE ALDVLTPSCE - ENSP00000376250/1-482 ---------- ---FHYKH-- ---------- ---------- - ENSTTRP00000008084/1-612 ---------- ---FHYKP-- ---------- ---------- - ENSBTAP00000009121/1-306 ---------- ---FHYKP-- ---------- ---------- -