KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:21 2014 Check: 00 .. Name: ENSTTRP00000014873/1-479 Len: 479 Check: 243 Weight: 1.00 Name: ENSP00000362469/1-477 Len: 479 Check: 2270 Weight: 1.00 Name: ENSBTAP00000009144/1-478 Len: 479 Check: 1054 Weight: 1.00 Name: bmy_04057T0/1-446 Len: 479 Check: 4094 Weight: 1.00 Name: BACU016274/1-478 Len: 479 Check: 670 Weight: 1.00 // 1 50 ENSTTRP00000014873/1-479 MTPGDEEETQ PLLRLPGGSA PRGRRVFLAR LAAALGXXXX XXXXXXXXXX ENSP00000362469/1-477 MTPEDPEETQ PLLGPPGGSA PRGRRVFLAA FAAALGPLSF GFALGYSSPA ENSBTAP00000009144/1-478 MTPEDQEETQ PLLRPPGGSA PRGRRVFLAA FAAALGPLSF GFALGYSSPA bmy_04057T0/1-446 MTPGDQEETQ PLLRPPGGSA PRGRRVFLAS FAAALGPLSF GFALGYSSPA BACU016274/1-478 MTPGDQEETQ PLLRPPGGSA PRGRRVFLAA FAAALGPLSF GFALGYSSPA 51 100 ENSTTRP00000014873/1-479 XXXXXXXXXX XXXXLDDAAA SWFGAIVTLG AAAGGVLGGW LVDRAGRKLS ENSP00000362469/1-477 IP-SLQRAAP PAPRLDDAAA SWFGAVVTLG AAAGGVLGGW LVDRAGRKLS ENSBTAP00000009144/1-478 IP-SLRRAAP PAPHLDEDAA SWFGAIVTLG AAAGGVLGGW LLDRAGRKLS bmy_04057T0/1-446 IP-SLRRAAS PALRLDDAAA SWFGAIVTLG AAAGGVLGGW LVDRAGRKLS BACU016274/1-478 IP-SLRRAAP PALRLDDAAA SWFGAIVTLG AAAGGGLGGW LVDRAGRKLS 101 150 ENSTTRP00000014873/1-479 LLLCAVPFVA GFTVITAAQN VWMLLGGRLL TGLACGIASL VAPVYISEIA ENSP00000362469/1-477 LLLCSVPFVA GFAVITAAQD VWMLLGGRLL TGLACGVASL VAPVYISEIA ENSBTAP00000009144/1-478 LVLCALPFVA GFAVITAAQN LWMLLGGRLL TGLACGIASL VAPVYISEIA bmy_04057T0/1-446 LLLCAVPFVA GFTVITAAQN VWMLLGGRLL TGLACGIASL VAPV------ BACU016274/1-478 LLLCAVPFVA GFTVITAAQN VWMLLGGRLL TGLACGIASL VAPVYISEIA 151 200 ENSTTRP00000014873/1-479 YPEVRGLLGS CVQLMVVIGI LLAYLAGWVL KWRWLAVLGC VPPSFMLLLM ENSP00000362469/1-477 YPAVRGLLGS CVQLMVVVGI LLAYLAGWVL EWRWLAVLGC VPPSLMLLLM ENSBTAP00000009144/1-478 YPEVRGLLGS CVQLMVVTGI LLAYLAGWVL EWRWLAVLGC VAPSFMLLLM bmy_04057T0/1-446 ---------- ---------- ------SWVL KWRWLAVLGC VPPSFMLLLM BACU016274/1-478 YPEVRGLLGS CVQLMVVIGI LLAYLAGWVL KWRWLAVLGC VPPSFMLLLM 201 250 ENSTTRP00000014873/1-479 CCMPETPRYL LTQHKRQEAA AAMQFLWGSE QGWEEPPVGA EHEGFHLAQL ENSP00000362469/1-477 CFMPETPRFL LTQHRRQEAM AALRFLWGSE QGWEDPPIGA E-QSFHLALL ENSBTAP00000009144/1-478 CFMPETPRFL LSQHKHQEAM AAMQFLWGYA QGWEEPPLGA QHQDFHVAQL bmy_04057T0/1-446 CCMPETPRFL LTQHKRQEAM AAMQFLWGSE QGWEEPPAGA ERQGFHLAQL BACU016274/1-478 CCMPETPRFL LTQHKRQEAM AAMQFLWGSE QGWEEPPVGA EHQGFHLAQL 251 300 ENSTTRP00000014873/1-479 RRPGVYKPFI IGISLMAFQQ LSGINAVMFY AETIFEEAKF KDSSLASVIV ENSP00000362469/1-477 RQPGIYKPFI IGVSLMAFQQ LSGVNAVMFY AETIFEEAKF KDSSLASVVV ENSBTAP00000009144/1-478 RRPGVYKPFI IGISLMAFQQ LSGVNAVMFY AETIFEEAKF KDSSLASVVV bmy_04057T0/1-446 WRPGVYKPFI IGISLMAFQQ LSGINAVMFY AETIFEEAKF KDSSLASVIV BACU016274/1-478 RRPGVYKPFI IGISLMAFQQ LSGINAVMFY AETIFEEAKF KDSSLASVIV 301 350 ENSTTRP00000014873/1-479 GIIQVLFTAV AALVMDRAGR RLLLALSGVV MVFSTSAFGA YFKLTQGGPS ENSP00000362469/1-477 GVIQVLFTAV AALIMDRAGR RLLLVLSGVV MVFSTSAFGA YFKLTQGGPG ENSBTAP00000009144/1-478 GVIQVLFTAT AALIMDRAGR RLLLTLSGVV MVFSTSAFGA YFKLTEGGPS bmy_04057T0/1-446 GIIQVLFTAV AALVMDRAGR RLLLALSGVV MVFSTSAFGA YFKLTQSGPS BACU016274/1-478 GIIQVLFTAV AALIMDRAGR RLLLALSGVV MVFSTSAFGA YFKLTQGGPS 351 400 ENSTTRP00000014873/1-479 NSSHVDLLAP VSMEPTSGSV GLAWLAVGSM CLFIAXXXXX XXXXXXXXXX ENSP00000362469/1-477 NSSHVAISAP VSAQPVDASV GLAWLAVGSM CLFIAGFAVG WGPIPWLLMS ENSBTAP00000009144/1-478 NSSHVDLPAL ISMEAADTNV GLAWLAVGSM CLFIAGFAVG WGPIPWLLMS bmy_04057T0/1-446 NSSHVDLLAP VSMEPASGSV GLAWLAVGSM CLFIAGFAMG WGPIPWLLMS BACU016274/1-478 NSSHVDLLAP VSMEPASGSV GLAWLAVGSM CLFIAGFAVG WGPIPWLLMS 401 450 ENSTTRP00000014873/1-479 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXEVLRPY GAFWLAAAFC ENSP00000362469/1-477 EIFPLHVKGV ATGICVLTNW LMAFLVTKEF SSLMEVLRPY GAFWLASAFC ENSBTAP00000009144/1-478 EIFPLHVKGV ATGVCVLTNW FMAFLVTKEF SSLMEVLRPY GAFWLASAFC bmy_04057T0/1-446 EIFPLHVKGV ATGVCVLTNW FMAFLVTKEF SSLMEVLRPY GAFWLAAAFC BACU016274/1-478 EIFPLHVKGV ATGVCVLTNW FMAFLVTKEF SSLMEVLRPY GAFWLAAAFC 451 500 ENSTTRP00000014873/1-479 IFSVLFTLAC VPETKGKTLE QITAHFEGR ENSP00000362469/1-477 IFSVLFTLFC VPETKGKTLE QITAHFEGR ENSBTAP00000009144/1-478 IFGVLFTLAC VPETKGKTLE QITAHFEGR bmy_04057T0/1-446 IFSVLFTLAC VPETKGKTLE QITAHFEGR BACU016274/1-478 IFSVLFTLAC VPETKGKTLE QITAHFEGR