KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:37:24 2014 Check: 00 .. Name: ENSTTRP00000007888/1-613 Len: 620 Check: 4128 Weight: 1.00 Name: ENSP00000274853/1-613 Len: 620 Check: 4198 Weight: 1.00 Name: ENSBTAP00000009151/1-608 Len: 620 Check: 8769 Weight: 1.00 Name: bmy_16297T0/1-618 Len: 620 Check: 8425 Weight: 1.00 // 1 50 ENSTTRP00000007888/1-613 MATIPDWKLQ LLARRRQEEA AVRGREKAEQ ERLSQMPAWK RGLLERRRAK ENSP00000274853/1-613 MATIPDWKLQ LLARRRQEEA SVRGREKAER ERLSQMPAWK RGLLERRRAK ENSBTAP00000009151/1-608 MATIPDWKLQ LLARRRQEEA AVRGRETAER ERLSQMPAWK RGLLERRRAK bmy_16297T0/1-618 MATIPDWKLQ LLARRRQEEA AVRGREKAEQ ERLSQMPAWK RGLLERRRAK 51 100 ENSTTRP00000007888/1-613 LGLSPGEPSP APGTTEAGPP DPDESAVLLE AIGPVHQNRF IRQER-QQQQ ENSP00000274853/1-613 LGLSPGEPSP VLGTVEAGPP DPDESAVLLE AIGPVHQNRF IRQERQQQQQ ENSBTAP00000009151/1-608 LGLSPGEPSP APGTTEAGPP NPDESAVLLE AIGPVHQNRF IRQER---QQ bmy_16297T0/1-618 LGLSPGEPSP VPGTTEAGPP DPDESAVLLE AIGPVHQNRF IRQER--QQQ 101 150 ENSTTRP00000007888/1-613 QQQRSEELLA ERRPGSLEAW ERRLSPGEMR DQSPKGRESR EERLSPREAR ENSP00000274853/1-613 QQQRSEELLA ERKPGPLEAR ERRPSPGEMR DQSPKGRESR EERLSPRETR ENSBTAP00000009151/1-608 QQQRSEELLT DRRPGPLETR GRRPSAGETR DPSPKGRESR EEWL-----R bmy_16297T0/1-618 QQQRSEELLA ERRPGSLEAW ERRPSPGEMR DQSPKGRESR EERLSPREAR 151 200 ENSTTRP00000007888/1-613 ERRLGIGGAR ESSPRPLEAR DWRQSPGEAG DRSSRLSEVR KWRLSPGETP ENSP00000274853/1-613 ERRLGIGGAQ ELSLRPLEAR DWRQSPGEVG DRSSRLSEAW KWRLSPGETP ENSBTAP00000009151/1-608 EKRLGIGGAR ELSPRPLESR DWRQSPGEAG DRSSRLSEVR KWRLSPGETP bmy_16297T0/1-618 ERRLGIGGAR ESSPRPLEAR DWRQSPGEAG DRSSRLSEVR KWRLSPGETP 201 250 ENSTTRP00000007888/1-613 ERSLRLAEPQ EQSPRRKEVM ENRLSPVESD NQKLGLTEAH KWTPDSRXXX ENSP00000274853/1-613 ERSLRLAESR EQSPRRKEV- ESRLSPGESA YQKLGLTEAH KWRPDSRESQ ENSBTAP00000009151/1-608 ERSLRLAEPR EQSPRRTEVV DSRLSPEESD NQKLGLTESR KWRPDPRESQ bmy_16297T0/1-618 ERSLRLAEPQ EQSPRRKEVV ENRLSPVESD NQKLGLTEAH KWRPDSRESQ 251 300 ENSTTRP00000007888/1-613 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000274853/1-613 EQSLVQLEAT EWRLRSGEER QDYSEECGRK EEWPVPGVAP KETAELSETL ENSBTAP00000009151/1-608 GQSLAQLEAS EWRPSSGEER KDCSEEWGRK DERPIPRMVP EGTTVLSETP bmy_16297T0/1-618 EQIWVQPEAS EWRLSSGEER KDCSEECGRQ EERPSPRMVP EEITASSETL 301 350 ENSTTRP00000007888/1-613 XXXXXXXXXX XXXXXXXX-- XXXXXXXXXX XXXXXXXXXN SGKVRDWTPR ENSP00000274853/1-613 TREAQGNSSA GVEAAEQR-- PVEDGERGMK PTEGWKWTLN SGKAREWTPR ENSBTAP00000009151/1-608 TREAPDSRSA GPEGAEERPS PVEDGERGLR PLEGWKWTLN SGKVRDWTPR bmy_16297T0/1-618 TREAPDSSSG GVEAAEQRPT PAEDGERGLR LTEGWKWTLN SGKVRDWTPR 351 400 ENSTTRP00000007888/1-613 DTETQTQKPD PPESAEKHLS PLAAEAGEGE AEKEEAGAQG RPLSALQNRC ENSP00000274853/1-613 DIEAQTQKPE PPESAEKLLE SPGVEAGEGE AEKEEAGAQG RPLRALQNCC ENSBTAP00000009151/1-608 DTEPQPQKPD TPESAEKHVG PLGAEAGEGE AEKEEAGTQS RPLGALQDRC bmy_16297T0/1-618 DTETQTQKPD PPESAEKHLS PLAAEAGEGE AEKEEAGAQG RPLSALQNRC 401 450 ENSTTRP00000007888/1-613 SVPSPLSPED AGTGGSRQQE EEAGELRPPP AAPLSPPPPA PPAPQSPGDP ENSP00000274853/1-613 SVPSPLPPED AGTGGLRQQE EEAVELQPPP PAPLSPPPPA PTAPQPPGDP ENSBTAP00000009151/1-608 SAPSPLSPED AGTGASRRQE EEAGELRPPP AAPLSPPPPA PPAPQSLGDP bmy_16297T0/1-618 SVPSPLPPED AGTGGSRQQE EEAGELRPPP AAPLSPPPPA PPAPQSPGDP 451 500 ENSTTRP00000007888/1-613 LMSRLFYGVK AGPGVGAPRR SGHTFTVNPR RSVPPAAPAT PASPATADAA ENSP00000274853/1-613 LMSRLFYGVK AGPGVGAPRR SGHTFTVNPR RSVPPATPAT PTSPATVDAA ENSBTAP00000009151/1-608 LMSRLFYGVK AGPGVGAPRR SGHTFTVNPR RSAPPAAPAT PATPATADAA bmy_16297T0/1-618 LMSRLFYGVK AGPGVGAPRR SGHTFTVNPR RSVPPAAPAT PASPATADAA 501 550 ENSTTRP00000007888/1-613 VAGAGKKRYP TAEEILVLGG YLRLDRSCLV KGSPERHHKQ LKISFSETAL ENSP00000274853/1-613 VPGAGKKRYP TAEEILVLGG YLRLSRSCLA KGSPERHHKQ LKISFSETAL ENSBTAP00000009151/1-608 VPGAGKKRYP TAEEILVLGG YLRLSRSCLV KGSPERRHKQ LKISFSETAL bmy_16297T0/1-618 VPGAGKKRYP TAEEILVLGG YLRLGRSCLV KGSPERHHKQ LKISFSETAL 551 600 ENSTTRP00000007888/1-613 ETTYQYPSES SVLEELGPEP EAPSASSPPA AQPDDEEDEE ELLLLQPELQ ENSP00000274853/1-613 ETTYQYPSES SVLEELGPEP EVPSAPNPPA AQPDDEEDEE ELLLLQPELQ ENSBTAP00000009151/1-608 ETTYQYPSES SVLEELGPEP EAPSAPSPPA AQADDEEEEE ELLLLQPELQ bmy_16297T0/1-618 ETTYQYPSES SVLEELGPEP EAPSASSPPA AQPDDEEDEE ELLLLQPELQ 601 650 ENSTTRP00000007888/1-613 GGLRTKALIV ----DESCRR ENSP00000274853/1-613 GGLRTKALIV ----DESCRR ENSBTAP00000009151/1-608 GGLRTKALIV ----DESCRR bmy_16297T0/1-618 GGLRTKALIV VLQANKDMVK