KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:25 2014 Check: 00 .. Name: ENSBTAP00000009179/1-570 Len: 570 Check: 2951 Weight: 1.00 Name: ENSP00000342322/1-570 Len: 570 Check: 5683 Weight: 1.00 Name: ENSTTRP00000002551/1-569 Len: 570 Check: 2358 Weight: 1.00 Name: bmy_12994T0/1-468 Len: 570 Check: 6275 Weight: 1.00 Name: BACU016363/1-78 Len: 570 Check: 8931 Weight: 1.00 // 1 50 ENSBTAP00000009179/1-570 MGLLRLLLIV VLASVTRGAC GAEIVGNSSE GLLEFSVGKF RYLELKKPFP ENSP00000342322/1-570 MGFLQLLVVA VLASEHRVAG AAEVFGNSSE GLIEFSVGKF RYFELNRPFP ENSTTRP00000002551/1-569 MELLRLLLLA VLASEPAAAA GAETVGNSSE GLLEFSVGRF RYLELKKPSP bmy_12994T0/1-468 MELLRLLLLA VLASEPAAAG GAETVGNSSE ---------- ---------- BACU016363/1-78 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000009179/1-570 EEAILRHISS NVTFVIFQIH SQYQNTTISF SETLLPNASE TGTDKGLVSI ENSP00000342322/1-570 EEAILHDISS NVTFLIFQIH SQYQNTTVSF SPTLLSNSSE TGTASGLVFI ENSTTRP00000002551/1-569 EEAILRHISS NVTFLIFQIH SQYQNTTVSF SETLLPNASG TGTDKGLVFI bmy_12994T0/1-468 ---------- ---------- ---------- ---------- ---------- BACU016363/1-78 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000009179/1-570 LRPEQSMCTW HLETLDPEPV QNVAIPLSYS ESDPIPGGCN LEFDVDIDPN ENSP00000342322/1-570 LRPEQSTCTW YLGTSGIQPV QNMAILLSYS ERDPVPGGCN LEFDLDIDPN ENSTTRP00000002551/1-569 LRPEQSICTW HLETSDPEPV QNVAIPLSYS ESDPIPGGCN LEFDLDIDSN bmy_12994T0/1-468 ---------- ---------- ---------- --DPIPGGCN LEFDLDIDSN BACU016363/1-78 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000009179/1-570 IYLEYNFFET TIKFAPANLG YARGADPPSC DVKMGPDSRW RLQYDVYQYF ENSP00000342322/1-570 IYLEYNFFET TIKFAPANLG YARGVDPPPC DAGTDQDSRW RLQYDVYQYF ENSTTRP00000002551/1-569 IYLEYNFFET TIKFAPANLG HARGADAPPC DVKTGQDSRW RLQYDVYQYF bmy_12994T0/1-468 IYLEYNFFET TIKFAPANLG HARGTDAPPC DVKTGXDSRW RLQYDVYQYF BACU016363/1-78 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000009179/1-570 LPENDLTEEV LLRHLQRMAE VPQVQANAVK VVTLTADDKT SVSFSSLRGQ ENSP00000342322/1-570 LPENDLTEEM LLKHLQRMVS VPQVKASALK VVTLTANDKT SVSFSSLPGQ ENSTTRP00000002551/1-569 LPENDLTEEA LLRHLQRMAE VPQVQANALK VVTLTADDKT SVSFSSLRGQ bmy_12994T0/1-468 LPENDLTEEA LLRHLQRMAE VPQVQANAVK SLLDKTDDKT SVSFSSLRGQ BACU016363/1-78 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000009179/1-570 GVIYNVIVRD PFLNTSTAYV PTHTYACSFE AEEGNCSSLG RVSTKVFFTL ENSP00000342322/1-570 GVIYNVIVWD PFLNTSAAYI PAHTYACSFE AGEGSCASLG RVSSKVFFTL ENSTTRP00000002551/1-569 GVIYNVIVRD PFLNTSAAYV PAHTYACSFE AGEDNCSSLX XXXXXXXXXX bmy_12994T0/1-468 GVIYNVIVRD PFLNTSAAYV PAHTYACSFE AGEDNCSSLG RVSTKVFFTL BACU016363/1-78 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000009179/1-570 FALLGLFICF FGHRFWKTEL FFIGFIFMGF FFYILITRLT PIKYDVRLIV ENSP00000342322/1-570 FALLGFFICF FGHRFWKTEL FFIGFIIMGF FFYILITRLT PIKYDVNLIL ENSTTRP00000002551/1-569 XXXXXXXXXX XXXXFWK-EL FFIGFIFMGF FFYILITRLT PIKYDVRLVL bmy_12994T0/1-468 FALLGLFICF FGHRFWKTEL FFIGFIFMGF FFYILITRLT PIKYDVRLVL BACU016363/1-78 ---------- ---------- ---------- ---------- ---------- 351 400 ENSBTAP00000009179/1-570 TAIAGSIGGI FLVAAWWRFG VLTLCMLCVG LVLGFLVASV AFFTPLGNLK ENSP00000342322/1-570 TAVTGSVGGM FLVAVWWRFG ILSICMLCVG LVLGFLISSV TFFTPLGNLK ENSTTRP00000002551/1-569 TAVAGSVGGI FLVAAWWRFG ILVLCMLCVG LVLGFLVSSV TFFTPLGNLK bmy_12994T0/1-468 TAVAGSVGGI LLVAAWWRLG VVVLCMPCVG LVLGFLVSSV TFFTPLGNLK BACU016363/1-78 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000009179/1-570 IFRVDAVFWV TFSCIAIFIP VVFMGCLRIL NILSCGFIGS YSVVLAVDSY ENSP00000342322/1-570 IFHDDGVFWV TFSCIAILIP VVFMGCLRIL NILTCGVIGS YSVVLAIDSY ENSTTRP00000002551/1-569 IFRDDSVFWV TFSCIAILIP VVFMGCLRIL NILSCGFIGS YSVVLAVDSY bmy_12994T0/1-468 IFRDDSVFWV TFSCIAILIP VVFMGCLRIL NILSCGFIGS YSVVLAVDSY BACU016363/1-78 ---------- ---------- ---------- ---------- ---------- 451 500 ENSBTAP00000009179/1-570 LYTSLSYITL NILRRALHVD FRRAFVNVPF QTNDFIVLAV WGMLAVSGIT ENSP00000342322/1-570 WSTSLSYITL NVLKRALNKD FHRAFTNVPF QTNDFIILAV WGMLAVSGIT ENSTTRP00000002551/1-569 LYTSLSYITL NVLKRVLHMD FRRAFINVPF QANDFIILAV WGMLAVSGIT bmy_12994T0/1-468 LYSSLSYITL NVLKRVLHTD FRRAFINVPF QTNDFVILAV WGMLAVSGIT BACU016363/1-78 ---------- ---------- ---------- ---------- --MLAVSGIT 501 550 ENSBTAP00000009179/1-570 LQIRRERGRP FFPPHPYKLW KRERERRVTN ILDPSYHIPP LRERLFSRLA ENSP00000342322/1-570 LQIRRERGRP FFPPHPYKLW KQERERRVTN ILDPSYHIPP LRERLYGRLT ENSTTRP00000002551/1-569 LQIRRERGQP FFPPHPYKLW KRERERRVTN ILDPSYHIPP LRERLYGRLA bmy_12994T0/1-468 LQIRRERGQP FFPPHPYKLW KRERERRVTN ILDPSYHVPP LRERLYGRLA BACU016363/1-78 FQIRRERGQP FFPPHPYKLW KRERERRVTN ILDPSYHVPP LRERLYGRLA 551 600 ENSBTAP00000009179/1-570 QIEGLFQKEQ PAGERTPLLL ENSP00000342322/1-570 QIKGLFQKEQ PAGERTPLLL ENSTTRP00000002551/1-569 QIKELFQKEQ PAGERTPLLL bmy_12994T0/1-468 QIKELFQKEQ PAGERTPLLL BACU016363/1-78 QIKELFQKEQ PAGERTPLLL