KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:32 2014 Check: 00 .. Name: bmy_18304T0/1-518 Len: 612 Check: 324 Weight: 1.00 Name: ENSP00000406084/1-600 Len: 612 Check: 6061 Weight: 1.00 Name: ENSBTAP00000009220/1-568 Len: 612 Check: 2471 Weight: 1.00 Name: ENSTTRP00000004298/1-581 Len: 612 Check: 9957 Weight: 1.00 Name: BACU007667/1-600 Len: 612 Check: 3147 Weight: 1.00 // 1 50 bmy_18304T0/1-518 MGVPGGGP-- ---------- ---------- --NRGDRLKA RERGLGGKRV ENSP00000406084/1-600 MATEGGGKEM NEIKTQFTTR EGLYKLLPHS EYSRPNRVPF NSQGSNPVRV ENSBTAP00000009220/1-568 MATEGGGKEM NEIKTQFTTR EGLYKLLPHS EYSRPNRVPF NSQGSNPVRV ENSTTRP00000004298/1-581 MATEGGGKEM NEIKTQFTTR EGLYKLLPHS EYSRPNRVPF NSQGSNPVRV BACU007667/1-600 MATEGGGKEM NEIKTQFTTR EGLYKLLPHS EYSRPNRVPF NSQGSNPVRV 51 100 bmy_18304T0/1-518 IF-------- ---------- ---------G VDRAADLSKP IDKRIYKGTQ ENSP00000406084/1-600 SFVNLNDQSG NGDRLCFNVG RELYFYIYKG VRKAADLSKP IDKRIYKGTQ ENSBTAP00000009220/1-568 SFVNLNDQSG NGDRLCFNVG RELYFYIYKG VRKAADLSKP IDKRIYKGTQ ENSTTRP00000004298/1-581 SFVNLNDQSG NGDRLCFNVG RELYFYIYKG VRKAADLSKP IDKRIYKGTQ BACU007667/1-600 SFVNLNDQSG NGDRLCFNVG RELYFYIYKG VRKAADLSKP IDKRIYKGTQ 101 150 bmy_18304T0/1-518 PTCHDFNHLT ATAESVSLLV GFSAGQVQLI DPIKKETSKL FNEE------ ENSP00000406084/1-600 PTCHDFNHLT ATAESVSLLV GFSAGQVQLI DPIKKETSKL FNEENSCQHL ENSBTAP00000009220/1-568 PTCHDVNHLT ATAESVSLLV GFSAGQVQLI DPIKKETSKL FNEE------ ENSTTRP00000004298/1-581 PTCHDFNHLT ATAESVSLLV GFSAGQVQLI DPIKKETSKL FNEE------ BACU007667/1-600 PTCHDFSHLT ATAESVSLLV GFSAGQVQLI DPIKKETSKL FNEENSCQHL 151 200 bmy_18304T0/1-518 ---------- ---------- -----RLIDK SRVTCVKWVP GSESLFLVAH ENSP00000406084/1-600 WKVDWNEERQ NEGSKTSEEA LVTVQRLIDK SRVTCVKWVP GSESLFLVAH ENSBTAP00000009220/1-568 ---------- ---------- -----RLIDK SRVTCV-WVP GSESLFLVAH ENSTTRP00000004298/1-581 ---------- ---------- -----RLIDK SRVTCVKWVP GSESLFLVAH BACU007667/1-600 WKVDWNEERE NEGSKTSEEA LVPVQRLIDK SRVTCVKWVP GSESLFLVAH 201 250 bmy_18304T0/1-518 SSGNMYLYNV EHACGTTAPH YQLLKQGESF AVHTCKSKST RNPLLKWTVG ENSP00000406084/1-600 SSGNMYLYNV EHTCGTTAPH YQLLKQGESF AVHTCKSKST RNPLLKWTVG ENSBTAP00000009220/1-568 SSGNMYLYNV EHTCGTTAPH YQLLKQGESF AVHTCKSKST RNPLLKWTVG ENSTTRP00000004298/1-581 SSGNMYLYNV EHACGTTAPH YQLLKQGESF AVHTCKSKST RNPLLKWTVG BACU007667/1-600 SSGNMYLYNV EHACGTTAPH YQLLKQGESF AVHTCKSKST RNPLLKWTVG 251 300 bmy_18304T0/1-518 EGALNEFAFS PDGKFLACVS QDGFLRVFNF DSVELHGTMK SYFGGLLCVC ENSP00000406084/1-600 EGALNEFAFS PDGKFLACVS QDGFLRVFNF DSVELHGTMK SYFGGLLCVC ENSBTAP00000009220/1-568 EGALNEFAFS PDGKFLACVS QDGFLRVFNF DSVELHGTMK SYFGGLLCVC ENSTTRP00000004298/1-581 EGALNEFAFS PDGKFLACVS QDGFLRVFNF DSVELHGTMK SYFGGLLCVC BACU007667/1-600 EGALNEFAFS PDGKFLACVS QDGFLRVFNF DSVELHGTMK SYFGGLLCVC 301 350 bmy_18304T0/1-518 WSPDGKYIVT GGEDDLVTVW SFGDCRVIAR GHGHKSWVSV VAFDPYTTSV ENSP00000406084/1-600 WSPDGKYIVT GGEDDLVTVW SFVDCRVIAR GHGHKSWVSV VAFDPYTTSV ENSBTAP00000009220/1-568 WSPDGKYIVA GGEDDLVTVW SFGDCRVIAR GHGHKSWVSV VAFDPYTTSV ENSTTRP00000004298/1-581 WSPDGKYVVT GGEDDLVTVW SFGDCRVIAR GHGHKSWVSV VAFDPYTTSV BACU007667/1-600 WSPDGKYIVT GGEDDLVTVW SFGDCRVIAR GHGHKSWVSV VAFDPYTTSV 351 400 bmy_18304T0/1-518 EESDPMEFSG SDEDFQDLLH FGRDRANSTQ SRLSKRNSTE SRPVSVTYRF ENSP00000406084/1-600 EEGDPMEFSG SDEDFQDLLH FGRDRANSTQ SRLSKRNSTD SRPVSVTYRF ENSBTAP00000009220/1-568 EESDPMEFSG SDEDFQDLLH FGRDRANSTQ SRLSKRNSTE SRPVSVTYRF ENSTTRP00000004298/1-581 EESDPMELSG SDEDFQDLLH FGRDRANSTQ SRLSKRNSTE SRPVSVTYRF BACU007667/1-600 EESDPMEFSG SDEDFQDLLH FGRDRANSTQ SRLSKRNSTE SRPVSVTYRF 401 450 bmy_18304T0/1-518 GSVGQDTQLC LWDLTEDILF PHQPLSRART HTNVMNATSP PAGSTGNSVT ENSP00000406084/1-600 GSVGQDTQLC LWDLTEDILF PHQPLSRART HTNVMNATSP PAGSNGNSVT ENSBTAP00000009220/1-568 GSVGQDTQLC LWDLTEDILF PHQPLSRART HTNVMNATSP PAGSTGNSVP ENSTTRP00000004298/1-581 GSVGQDTQLC LWDLTEDILF PHQPLSRART HTNVMNATSP PAGSTGNSVT BACU007667/1-600 GSVGQDTQLC LWDLTEDILF PHQPLSRART HTNVMNATSP PAGSTGNSVT 451 500 bmy_18304T0/1-518 TPSNSAPPPL PRSNSLPHSA VSSTGSKGSI ADGAIASGVS KFATLSLHDR ENSP00000406084/1-600 TPGNSVPPPL PRSNSLPHSA VSNAGSKSSV MDGAIASGVS KFATLSLHDR ENSBTAP00000009220/1-568 TPGSAAPPPL PRSNSLPHAA VSSAGSKGSV ADGAIAAGVS KFATLSLHDR ENSTTRP00000004298/1-581 TPGNSAPPPL PRSNSLPHSA VSSTGSKGSI ADGAIASGVS KFATLSLHDR BACU007667/1-600 TPGNSAPPPL PRSNSLPHSA VSSTGSKGSI ADGAIASGVS KFATLSLHDR 501 550 bmy_18304T0/1-518 KDRHHEKDHK RNHSMGHISS KSSDKLNLVT KTKTDPAKTL GTPLCPRMED ENSP00000406084/1-600 KERHHEKDHK RNHSMGHISS KSSDKLNLVT KTKTDPAKTL GTPLCPRMED ENSBTAP00000009220/1-568 KDRHHEKDHK RNHSMGHISS KSSDRLNLVT KTKTDPAKAL GTPLCPRMED ENSTTRP00000004298/1-581 KDRHHEKDHK RNHSMGHISS KSSDKLNLVT KTKTDPAKTL GTPLCPRMED BACU007667/1-600 KDRHHEKDHK RNHSMGHISS KSSDKLNLVT KTKTDPAKTL GTPLCPRMED 551 600 bmy_18304T0/1-518 VPLLEPLICK KIAHERLTVL IFLEDCIVTA CQEGFICTWG RPGKVVSFNP ENSP00000406084/1-600 VPLLEPLICK KIAHERLTVL IFLEDCIVTA CQEGFICTWG RPGKVVSFNP ENSBTAP00000009220/1-568 VPLLEPLICK KIAHERLTVL IFLEDCIVTA CQEGFICTWG RPGKVVSFNP ENSTTRP00000004298/1-581 VPLLEPLICK KIAHERLTVL IFLEDCIVTA CQEGFICTWG RPGKVGLMSA BACU007667/1-600 VPLLEPLICK KIAHERLTVL IFLEDCIVTA CQEGFICTWG RPGKVVSFNP 601 650 bmy_18304T0/1-518 ---------- -- ENSP00000406084/1-600 ---------- -- ENSBTAP00000009220/1-568 ---------- -- ENSTTRP00000004298/1-581 PNQASSPGGT IV BACU007667/1-600 ---------- --