KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:33 2014 Check: 00 .. Name: ENSP00000355304/1-419 Len: 546 Check: 7981 Weight: 1.00 Name: ENSBTAP00000009222/1-433 Len: 546 Check: 6808 Weight: 1.00 Name: BACU007666/1-512 Len: 546 Check: 1884 Weight: 1.00 Name: bmy_18302T0/1-401 Len: 546 Check: 2497 Weight: 1.00 Name: ENSTTRP00000004299/1-418 Len: 546 Check: 5500 Weight: 1.00 // 1 50 ENSP00000355304/1-419 ---------- -----MKNYK AIGKIGEGTF SEVMKMQSLR DGNYYACKQM ENSBTAP00000009222/1-433 MLLLDYLTDE DICCLEADYK AIGKIGEGTF SEVMKIQNLR DGNHYACKQM BACU007666/1-512 ---------- -----FIDYK AIGKIGEGTF SEVMKMQNLR DGNYYACKQM bmy_18302T0/1-401 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004299/1-418 ---------- -----IKNYK AIGKIGEGTF SEVVKMQNLR DGNYYACKQM 51 100 ENSP00000355304/1-419 KQRFESIEQV NNLREIQALR RLNPHPNILM LHEVVFDRKS GSLALICELM ENSBTAP00000009222/1-433 KQRFESIEQV NNLREIQALR RLNPHPNILT LHQVVFDRKS GSLALICELM BACU007666/1-512 KQHFESIEQV NNLREIQALR HLNPHPNILT LHEVVFDRKS GSLALICELM bmy_18302T0/1-401 ------IKQV NNLREIQALR HLNPHPNILT LHEVVFDRKS GSLALICELM ENSTTRP00000004299/1-418 KQHFGSIEQV NNLREIQALR HLNPHPNILT LHEVVFDRKS GSLALICELM 101 150 ENSP00000355304/1-419 DMNIYELIR- ---------- --------GR RYPLSEKKIM HYMYQLCKSL ENSBTAP00000009222/1-433 DMNIYELIR- ---------- --------GR RHPLSEKKVR HYMYQLCKSL BACU007666/1-512 DMNIYELIR- ---------- --------GR RHPLSEKKIM HYMYQLCKSL bmy_18302T0/1-401 DMNIYELIRG TDMGHSLVTI FAYFLDGTGR RHPLSEKKIM HYMYQLCKSL ENSTTRP00000004299/1-418 DMNIYELIR- ---------- --------GR RHPLSEKKIM HYMYQLCKSL 151 200 ENSP00000355304/1-419 DHIHRNGIFH RDVKPENILI KQDVLKLGDF GSCRSVYSKQ PYTEYISTRW ENSBTAP00000009222/1-433 DHMHRNGIFH RDVKPENILV KRDVLKLGDF GSCRSVYSKQ PYTEYISTRW BACU007666/1-512 DHMHRNGIFH RDVKPENILI KQDVLKLGDF GSCRSIYSKQ PYTEYISTRW bmy_18302T0/1-401 DHMHRNGIFH RDVKPENILI KQDVLKLGDF GSCQSIYSKQ PYTEYISTRW ENSTTRP00000004299/1-418 DHMHRNGIFH RDVKPENILI KQDVLKLGDF GSCRSIYSKQ PYTEYISTRW 201 250 ENSP00000355304/1-419 YRAPECLLTD GFYTYKMDLW SAGCVFYEIA SLQPLFPGVN ELDQISKIHD ENSBTAP00000009222/1-433 YRAPECLLTD GFYGFKMDLW SAGCVLYEMA SLQPLFPGAN ELDQISRIHD BACU007666/1-512 YRAPECLLTD GFYTYKMDLW SAGCVLYEMA SLQPLFPGAN ELDQISRIHD bmy_18302T0/1-401 YRAPECLLTD GFYTYKMDLW SAGCVLYEMA SLQPLFPGAN ELDQISRIHD ENSTTRP00000004299/1-418 YRAPECLLTD GFYTYKMDLW SAGCVLYEMA SLQPLFPGAN ELDQISRIHD 251 300 ENSP00000355304/1-419 VIGTPAQKIL TKFKQSRAMN FDFPFKKGSG IPLLTTNLSP QCLSLLHAMV ENSBTAP00000009222/1-433 VMGTPAEKTL TKFKQSRAMS FDFPFKKGSG IPLLTTSLSP QCLSLLHAMV BACU007666/1-512 VIGTPAGKTL TKFKRSRAMS FDFTFKKGSG IPLLTASLSP QCLSLLHAMV bmy_18302T0/1-401 VIGTPAGKTL TKFKRSRAMS FDFTFKKGSG IPLLTASLSP QCLSLLHAMV ENSTTRP00000004299/1-418 VIGTPTGKTI TKFKRSRAMS FDFTFKKGSG IPLLTASLSP QCLSLLHAMV 301 350 ENSP00000355304/1-419 AYDPDERIAA HQALQHPYFQ EQRKTEKRAL GSHRK---AG FPEHPVAPEP ENSBTAP00000009222/1-433 AYDPDERITA HQALQHPYFQ EQRAAEKQAL ARARWKASAP FPECPTAPE- BACU007666/1-512 AYDPDERITA HQALQHPYFQ EQRAAEKQAP ARARRKASAL CPKRPVAPEP bmy_18302T0/1-401 AYDPDERITA HQALQHPYFQ GQRAAEKQAP ARARRKASAL CPERPVAPEL ENSTTRP00000004299/1-418 AYDPDERITA HQALQHPYFQ EQRAAEKHAP ARPRR---AL CPKRPVAPKL 351 400 ENSP00000355304/1-419 LSNSCQISKE GRKQKQSLKQ EEDRPKRRGP AYVMELPKLK LSGVVRLSSY ENSBTAP00000009222/1-433 LSSAWQTAQE GRKQKQPPRP EENHPRRPGP ACLMELPRLK LSGAAKLASY BACU007666/1-512 LSNNWQPAQE GSKQKQPLKQ EKDHPRRQGP ARVTELPELK LSGVTKLSSY bmy_18302T0/1-401 LSNNWQLAQE GSKQKQPLKQ EEDHPRRHGP AHVVELPKLK LSGXTKLSSY ENSTTRP00000004299/1-418 LSNNWQPAQE GSK-KQPLKQ EEDHPRRHGP AYVMALPKLK LSGVTKQPLY 401 450 ENSP00000355304/1-419 SSPTLQSVLG SGTNGRVPVL RPLKCIPASK KTDPQKDLKP APQQCRLPTI ENSBTAP00000009222/1-433 SSPALPSVFL P----KVPLL RPLKCVGAAQ KTETQKDIKP SLKQYRLPTI BACU007666/1-512 SSPALQPVFA PGATRKVPVL RPLKCVGPNQ KTKVTCTLAP GQALLQTGSV bmy_18302T0/1-401 SSPALQSVFA PGATRKVPVL RPLKCVGPNQ KTDTQKDIKP NLKQHRLPTV ENSTTRP00000004299/1-418 YSPALQSVVA PGATRKVPVL RPPKCVGPNQ KTDTQKDIQP NLKQYRRPTV 451 500 ENSP00000355304/1-419 VRK-----GG R--------- ---------- ---------- ---------- ENSBTAP00000009222/1-433 ERR-----GG GD-------- ---------- ---------- ---------- BACU007666/1-512 SRRQRSATGG AQRCCGAEGR TGEELLQRRL PATWELSAVP ARPPQSIRVR bmy_18302T0/1-401 ERR-----GG GY-------- ---------- ---------- ---------- ENSTTRP00000004299/1-418 ERR-----GG G--------- ---------- ---------- ---------- 501 550 ENSP00000355304/1-419 ---------- ---------- ---------- ---------- ------ ENSBTAP00000009222/1-433 ---------- ---------- ---------- ---------- ------ BACU007666/1-512 SAQNRHQFGR KANPRSLPTW DLAQRKVTEN SEYLPCSEQT SPLESF bmy_18302T0/1-401 ---------- ---------- ---------- ---------- ------ ENSTTRP00000004299/1-418 ---------- ---------- ---------- ---------- ------