KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:45 2014 Check: 00 .. Name: ENSP00000221485/1-560 Len: 587 Check: 1211 Weight: 1.00 Name: ENSTTRP00000005122/1-560 Len: 587 Check: 2127 Weight: 1.00 Name: ENSBTAP00000009255/1-560 Len: 587 Check: 1086 Weight: 1.00 Name: bmy_06384T0/1-408 Len: 587 Check: 2125 Weight: 1.00 Name: BACU002210/1-581 Len: 587 Check: 8991 Weight: 1.00 // 1 50 ENSP00000221485/1-560 MEFRQEEFRK LAGRALGKLH RLLEKRQEGA ETLELSADGR PVTTQTRDPP ENSTTRP00000005122/1-560 MEFRQEEFRK LAGRALGRLH RLLEKRQEGA ETLELSADGR PVTTQTRDPP ENSBTAP00000009255/1-560 MEFRQEEFRK LAGRALGKLH RLLEKRQEGA ETLELSADGR PVTTQTRDPP bmy_06384T0/1-408 ---------- ---------- ---------- ---------- ---------- BACU002210/1-581 MEFRQEEFRK LAGRALGRLH RLLEKRQEGA ETLELSADGR PVTTQTRDQP 51 100 ENSP00000221485/1-560 VVDCTCFGLP RRYIIAIMSG LGFCISFGIR CNLGVAIVSM VNNSTTHRGG ENSTTRP00000005122/1-560 VVDCTCFGLP RRYIIAIMSG LGFCISFGIR CNLGVAIVSM VNNSTTHRGG ENSBTAP00000009255/1-560 VVDCTCFGLP RRYIIAIMSG LGFCISFGIR CNLGVAIVSM VNNSTTHRGG bmy_06384T0/1-408 ---------- ---------- ---------- ---------- ---------- BACU002210/1-581 VVDCTCFGLP RRYIIAIMSG LGFCISFGIR CNLGVAIVSM VNNSTTHRGG 101 150 ENSP00000221485/1-560 HVVVQKAQFS WDPETVGLIH GSFFWGYIVT QIPGGFICQK FAANRVFGFA ENSTTRP00000005122/1-560 HVVVQQAQFT WDPETVGLIH GSFFWGYIVT QIPGGFICQK FAANRVFGFA ENSBTAP00000009255/1-560 HVVMQKAQFN WDPETVGLIH GSFFWGYIVT QIPGGFICQK FAANRVFGFA bmy_06384T0/1-408 ---------- ---------- ---------- ---------- ---------- BACU002210/1-581 HVVVQKAQFS WDPETVGLIH GSFFWGYIVT QIPGGFICQK FAANRVFGFA 151 200 ENSP00000221485/1-560 IVATSTLNML IPSAARVHYG CVIFVRILQG LVEGVTYPAC HGIWSKWAPP ENSTTRP00000005122/1-560 IVATSTLNML IPSAARVHYG CVIFVRILQG LVEGVTYPAC HGIWSKWAPP ENSBTAP00000009255/1-560 IVATSTLNML IPSAARVHYG CVIFVRILQG LVEGVTYPAC HGIWSKWAPP bmy_06384T0/1-408 --------ML IPSAARVHYG CVIFVRILQG LVEGVTYPAC HGIWSKWAPP BACU002210/1-581 IVATSTLNML IPSAARVHYG CVIFVRILQG LVEGVTYPAC HGIWSKWAPP 201 250 ENSP00000221485/1-560 LERSRLATTA FCGSYAGAVV AMPLAGVLVQ YSGWSSVFYV YGSFGIFWYL ENSTTRP00000005122/1-560 LERSRLATTA FCGSYAGAVV AMPLAGVLVQ YSGWSSVFYV YGSFGIFWYL ENSBTAP00000009255/1-560 LERSRLATTA FCGSYAGAVV AMPLAGVLVQ YSGWSSVFYV YGSFGIFWYL bmy_06384T0/1-408 LERSRLATTA FCGSYAGAVV AMPLAGVLVQ YSGWSSVFYV YGSFGIFWYL BACU002210/1-581 LERSRLATTA FCGSYAGAVV AMPLAGVLVQ YSGWSSVFYV YGSFGIFWYL 251 300 ENSP00000221485/1-560 FWLLVSYESP ALHPSISEEE RKYIEDAIGE SAKLMNPLTK FSTPWRRFFT ENSTTRP00000005122/1-560 FWLLVSYESP ALHPSISEEE RKYIEDAIGE SAKLMNPVTK FNTPWRRFFT ENSBTAP00000009255/1-560 FWLLVSYESP ALHPSISEEE RKYIEDAIGE SAKLMNPVTK FNTPWRRFFT bmy_06384T0/1-408 FWLLVSYESP ALHPSISEEE RKYIEDAIGE SAKLMNPVTK FNTPWRRFFT BACU002210/1-581 FWLLVSYESP ALHPSISEEE RKYIEDAIGE SAKLMNPVTK FNTPWRRFFT 301 350 ENSP00000221485/1-560 SMPVYAIIVA NFCRSWTFYL LLISQPAYFE EVFGFEISKV GLVSALPHLV ENSTTRP00000005122/1-560 SMPVYAIIVA NFCRSWTFYL LLISQPAYFE EVFGFEISKV GLVSALPHLV ENSBTAP00000009255/1-560 SMPVYAIIVA NFCRSWTFYL LLISQPAYFE EVFGFEISKV GLVSALPHLV bmy_06384T0/1-408 SMPVYAIIVA NFCRSWTFYL LLISQPAYFE EVFGFEISKV GLVSALPHLV BACU002210/1-581 SMPVYAIIVA NFCRSWTFYL LLISQPAYFE EVFGFEISKV GLVSALPHLV 351 400 ENSP00000221485/1-560 MTIIVPIGGQ IADFLRSRRI MSTTNVRKLM NCG------G FGMEATLLLV ENSTTRP00000005122/1-560 MTIIVPIGGQ IADFLMSRRI MSTTNVRKLM NCG------G FGMEATLLLV ENSBTAP00000009255/1-560 MTIIVPIGGQ IADFLRSRRI MSTTNVRKLM NCG------G FGMEATLLLV bmy_06384T0/1-408 MTIIVPIGGQ IADFLRSRRI MSTTNVRKLM NCGDKRLSVG FGMEATLLLV BACU002210/1-581 MTIIVPIGGQ IADFLRSRRI MSTTNVRKLM NCG------G FGMEATLLLV 401 450 ENSP00000221485/1-560 VGYSHSKGVA ISFLVLAVGF SGFAISGFNV NHLDIAPRYA SILMGISNGV ENSTTRP00000005122/1-560 VGYSHSKGVA ISFLVLAVGF SGFAISGFNV NHLDIAPRYA SILMGISNGV ENSBTAP00000009255/1-560 VGYSHSKGVA ISFLVLAVGF SGFAISGFNV NHLDIAPRYA SILMGISNGV bmy_06384T0/1-408 VGYSHSKGVA ISFLVLAVGF SGFAISGFNV NHLDIAPRYA SILMGISNGV BACU002210/1-581 VGYSHSKGVA ISFLVLAVGF SGFAISGFNV NHLDIAPRYA SILMGISNGV 451 500 ENSP00000221485/1-560 GTLSGMVCPI IVGAMTKHK- ---------- ---------- TREEWQYVFL ENSTTRP00000005122/1-560 GTLSGMVCPI IVGAMTKHK- ---------- ---------- TREEWQYVFL ENSBTAP00000009255/1-560 GTLSGMVCPI IVGAMTKHK- ---------- ---------- TREEWQYVFL bmy_06384T0/1-408 GTLSGMVCPI IVGAMTKHK- ---------- ---------- TREEWQYVFL BACU002210/1-581 GTLSGMVCPV IVGAMTKHKV LSPPPVSLSS DFTSPLSPPQ TREEWQYVFL 501 550 ENSP00000221485/1-560 IASLVHYGGV IFYGVFASGE KQPWAEPEEM SEEKCGFVGH DQLAGSDDSE ENSTTRP00000005122/1-560 IASLVHYGGV IFYGVFASGE KQPWAEPEEM SEEKCGFVGH DQLAGSDESE ENSBTAP00000009255/1-560 IASLVHYGGV IFYGVFASGE KQPWAEPEEM SEEKCGFVGH DQLAGSDESE bmy_06384T0/1-408 IASLVHYGGV IFYGVFASGE KQPWAEPEEM SEEKCGFVGH DQLAGSDESE BACU002210/1-581 IASLVHYGGV IFYGVFASGE KQPWAEPEEM SEEKCGFVGH DQLAGSDESE 551 600 ENSP00000221485/1-560 MEDEAEPPGA PPAPPPSYGA THSTFQPPRP PPPVRDY ENSTTRP00000005122/1-560 MEDEAEPPGA PPAPPPSYGA THSTVQPPRP PPPVRDY ENSBTAP00000009255/1-560 MEDEAEPPGA PPAPPPSYGA THSTVQPPRP PPPVRDY bmy_06384T0/1-408 MEDEAEPPGA PPAPPPSYGA THSTVQPPRP PPPVRGY BACU002210/1-581 MEDEAEPPGA PPAPPPSYGA THSTVQPPRP PPPVRGY