KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:37:47 2014 Check: 00 .. Name: ENSP00000216629/1-353 Len: 373 Check: 2628 Weight: 1.00 Name: ENSBTAP00000009271/1-352 Len: 373 Check: 9560 Weight: 1.00 Name: bmy_13125T0/1-353 Len: 373 Check: 1557 Weight: 1.00 Name: BACU007711/1-352 Len: 373 Check: 1582 Weight: 1.00 // 1 50 ENSP00000216629/1-353 -----MASSW PPL------- --------EL QSSNQSQLFP QNATACDNAP ENSBTAP00000009271/1-352 ------MASW ALL------- --------EL QTLNQSQPLP PNTTSCDEAW bmy_13125T0/1-353 MPTVCQVPQR ELVLVMQASA DDAATYDSKL QSSNQSQLPP ANATSCDSAQ BACU007711/1-352 ------MASR TLL------- --------EL QSSNQRQLPP PNATSCDSAQ 51 100 ENSP00000216629/1-353 EAWDLLHRVL PTFIISICFF GLLGNLFVLL VFLLPRRQLN VAEIYLANLA ENSBTAP00000009271/1-352 EAWALLHRVL PTCVLSICLC GLLGNLFVLS VFLVARRRLN TAEIYLANLA bmy_13125T0/1-353 EAWDLLHSVL PTFIITICFC GLLGNLFVLS VFLLARRRLN AAEIYLANLA BACU007711/1-352 EAWDLLHSVL PTFIITICFC GLLGNLFVLS VFLLARRRLN AAEIYLANLA 101 150 ENSP00000216629/1-353 ASDLVFVLGL PFWAENIWNQ FNWPFGALLC RVINGVIKAN LFISIFLVVA ENSBTAP00000009271/1-352 ASDLVFVLGL PFWAENIRNE FNWPFGALLC RLVNGIIKAN LFISVFLVVA bmy_13125T0/1-353 ASDLVFVLGL PFWAENIWKE FNWPFGAPLC RVVNGVIKAN LFISIFLVVA BACU007711/1-352 ASDLVFVLGL PFWAENIWKE FNWPFGALLC RVVNGVIKAN LFISIFLVVA 151 200 ENSP00000216629/1-353 ISQDRYRVLV HPMASRRQQR RRQARVTCVL IWVVGGLLSI PTFLLRSIQA ENSBTAP00000009271/1-352 ISQDRYCVLV HPMASRRQRR RRRAQGTCLL IWAVGALLSL PTFLLRSVKA bmy_13125T0/1-353 ISQDRYCVLV HPMASRRRRR RRRAQATCVL IWAVGGLLSI PTFLLRSVKA BACU007711/1-352 ISQDRYCVLV HPMASWRRRR RRRAQATCVL IWAVGGFLSI PTFLLRSVKA 201 250 ENSP00000216629/1-353 VPDLNITACI LLLPHEAWHF ARIVELNILG FLLPLAAIVF FNYHILASLR ENSBTAP00000009271/1-352 VPELNVSACV LRYPHDAWPF VRMVELTLLS FLLPLAAIVF FNCHILAALR bmy_13125T0/1-353 VPELNISACV LLYPNEAWPF ARMVELNVLG FLLPLVAIVF FNSHILAALR BACU007711/1-352 VPELNISACV LLYPNEAWPF ARMVELNVLG FLLPLVAIVF FNYHILAALR 251 300 ENSP00000216629/1-353 TREEVSRTRC GGRKDSKTTA LILTLVVAFL VCWAPYHFFA FLEFLFQVQA ENSBTAP00000009271/1-352 GRRQISRTRC GGPREGRTTA LILTLVSAFL LCWAPYHFFA FLEFLFQVRA bmy_13125T0/1-353 GRGKVNKTRH GGPTDGKTTA LILTLVAAFL LCWTPYHFFA FLEFLFQVWA BACU007711/1-352 GRGKVSKTRR GGPTDGKTTA LILMLVATFL LCWTPYHFFA FLEFLFQVWA 301 350 ENSP00000216629/1-353 VRGCFWEDFI DLGLQLANFF AFTNSSLNPV IYVFVGRLFR TKVWELYKQC ENSBTAP00000009271/1-352 VRGCFWENFI DLGLQCANFF AFVNSCLNPV IYVFWGQLFR TKVWELYKQC bmy_13125T0/1-353 VRGCFWENFT DLGLQWANFF AFINSCLNPV IYIFLGRLFR TKVWELYKRC BACU007711/1-352 VRGCFWENFT DLGLQWANFF AFINSCLNPV IYVFLGRLFR TKVWELYKRC 351 400 ENSP00000216629/1-353 TPKSLAPISS SHRKEIFQLF WRN ENSBTAP00000009271/1-352 IPGSLTPVAS SHRTEILQLF WRN bmy_13125T0/1-353 IPR------- ---------- --- BACU007711/1-352 IPRRLTPIST SHRKEILQLF WRN