KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:48 2014 Check: 00 .. Name: ENSP00000233813/1-272 Len: 273 Check: 4983 Weight: 1.00 Name: ENSBTAP00000009285/1-271 Len: 273 Check: 3476 Weight: 1.00 Name: bmy_03188T0/1-199 Len: 273 Check: 308 Weight: 1.00 Name: BACU012689/1-271 Len: 273 Check: 3335 Weight: 1.00 Name: ENSTTRP00000008540/1-159 Len: 273 Check: 4252 Weight: 1.00 // 1 50 ENSP00000233813/1-272 MVLLTAVLLL LAAYAGPAQS LGSFVHCEPC DEKALSMCPP SPLGCELVKE ENSBTAP00000009285/1-271 -MVLTAVLLL LAACAGSAQG LGSFVHCEPC DEKALSMCPP SPLGCELVKE bmy_03188T0/1-199 -WTI------ ---------- --------PG GQRARLLTP- ---------- BACU012689/1-271 -MVLTAVLLL LAACAGPAQG LGSFVHCEPC DEKALSMCPP SPLGCELVKE ENSTTRP00000008540/1-159 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000233813/1-272 PGCGCCMTCA LAEGQSCGVY TERCAQGLRC LPRQDEEKPL HALLHGR-GV ENSBTAP00000009285/1-271 PGCGCCMTCA LAEGQSCGVY TERCAQGLRC LPRQDEEKPL HALLHGR-GV bmy_03188T0/1-199 ---------- ---------- ---------- --------IL RALGSARLGL BACU012689/1-271 PGCGCCMTCA LAEGQSCGVY TERCAQGLRC LPRQDEEKPL HALLHGR-GV ENSTTRP00000008540/1-159 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000233813/1-272 CLNEKSYREQ VKIERDSREH EEPTTSEMAE ETYSPKIFRP KHTRISELKA ENSBTAP00000009285/1-271 CLNEKSYREQ AKIERDSREH EEPTTSEMAE ETYSPKIFRP KHTRISELKA bmy_03188T0/1-199 SPQRLILRPL LPAERDSREH EEPTTSEMAE ETYSPKIFRP KHTRISELKA BACU012689/1-271 CLNEKSYREQ AKIERDSREH EEPTTSEMAE ETYSPKIFRP KHTRISELKA ENSTTRP00000008540/1-159 ---------- ----RDSREH EEPTTSEMAE ETYSPKIFRP KHTRISELKA 151 200 ENSP00000233813/1-272 EAVKKDRRKK LTQSKFVGGA ENTAHPRIIS APEMRQESEQ GPCRRHMEAS ENSBTAP00000009285/1-271 EAVKKDRRKK LTQSKFVGGA ENTAHPRVIS APEMRQKSEQ GPCRRHMEAS bmy_03188T0/1-199 EAVKKDRRKK LTQSKFVGGA ENTAHPRVIS APEMRQESEQ GPCRRHMEAS BACU012689/1-271 EAVKKDRRKK LTQSKFVGGA ENTAHPRVIS APEMRQESEQ GPCRRHMEAS ENSTTRP00000008540/1-159 EAVKKDRRKK LTQSKFVGGA ENTAHPRVIS APEMRQESEQ GPCRRHMEAS 201 250 ENSP00000233813/1-272 LQELKASPRM VPRAVYLPNC DRKGFYKRKQ CKPSRGRKRG ICWCVDKYGM ENSBTAP00000009285/1-271 LQELKASPRM VPRAVYLPNC DRKGFYKRKQ CKPSRGRKRG ICWCVDKYGM bmy_03188T0/1-199 LQELKASPRM VPRAVYLPNC DRKGFYKRKQ CKPSRGRKRG ICWCVDKYGM BACU012689/1-271 LQELKASPRM VPRAVYLPNC DRKGFYKRKQ CKPSRGRKRG ICWCVDKYGM ENSTTRP00000008540/1-159 LQELKASPRM VPRAVYLPNC DRKGFYKRKQ CKPSRGRKRG ICWCVDKYGM 251 300 ENSP00000233813/1-272 KLPGMEYVDG DFQCHTFDSS NVE ENSBTAP00000009285/1-271 KLPGMEYVDG DFQCHTFDSS NVE bmy_03188T0/1-199 KLPGMEYVDG DFQCHTFDSS NVE BACU012689/1-271 KLPGMEYVDG DFQCHTFDSS NVE ENSTTRP00000008540/1-159 KLPGMEYVDG DFQCHTFDSS NVE