KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:50 2014 Check: 00 .. Name: ENSP00000427123/1-983 Len: 988 Check: 6110 Weight: 1.00 Name: ENSBTAP00000009296/1-979 Len: 988 Check: 1983 Weight: 1.00 Name: ENSTTRP00000003063/1-928 Len: 988 Check: 5886 Weight: 1.00 Name: bmy_21729T0/1-987 Len: 988 Check: 5682 Weight: 1.00 Name: BACU015025/1-986 Len: 988 Check: 5167 Weight: 1.00 // 1 50 ENSP00000427123/1-983 ----MQPTYL PWLSAKEKKT NEWNKNDDRL LQAVENGDAE KVASLLGKKG ENSBTAP00000009296/1-979 --------LL ALRVLFAPQT NEWNKNDDRL LQAVENGDAE KVASLLGKKG ENSTTRP00000003063/1-928 ---------- ---------T NEWNKNDDRL LQAVENGDAE KVASLLGKKG bmy_21729T0/1-987 MFSFGKPVFL GVSMVKGK-T NEWNKNDDRL LQAVENXDAE KVASLLGKKG BACU015025/1-986 MFSFGKPVFL GVSMVKGK-T NEWNKNDDRL LQAVENGDAE KVASLLGKKG 51 100 ENSP00000427123/1-983 ASATKHDSEG KTAFHLAAAK GHVECLRVMI THGVDVTAQD TTGHSALHLA ENSBTAP00000009296/1-979 ASATKHDSEG KTAFHLAATK GHVECLRVMV THGVDVTAQD TAGHSALHLA ENSTTRP00000003063/1-928 ASATKHDSEG KTAFHLAATK GHVECLRVMV THGVDVTAQD TAGHSALHLA bmy_21729T0/1-987 ASATKHDSEG KTAFHLAATK GHVECLRVMV THGVDVTAQD TAGHSALHLA BACU015025/1-986 ASATKHDSEG KTAFHLAATK GHVECLRVMV THGVDVTAQD TAGHSALHLA 101 150 ENSP00000427123/1-983 AKNSHHECIR KLLQSKCPAE SVDSSGKTAL HYAAAQGCLQ AVQILCEHKS ENSBTAP00000009296/1-979 AKNSHHECVK KLLQSKCPAE SIDSSGKTAL HYAAAQGCLQ AVQVLCEHRS ENSTTRP00000003063/1-928 AKNSHHECIK KLLQSKCPAE SIDSSGKTAL HYAAAQG-LQ AVQVLCEHKS bmy_21729T0/1-987 AKNSHHECIK KLLQSKCPAE SIDSSGKTAL HYAAAQGCLQ AVQVLCEHKS BACU015025/1-986 AKNSHHECIK KLLQSKCPAE SIDSSGKTAL HYAAAQGCLQ AVRVLCEHKS 151 200 ENSP00000427123/1-983 PINLKDLDGN IPLLLAVQNG HSEICHFLLD HGADVNSRNK SGRTALMLAC ENSBTAP00000009296/1-979 PINLKDLDGN IPLLLAVQNG HSEVCRFLLD HGADVNSRDK NGRTALMLAC ENSTTRP00000003063/1-928 PINLKDLDGN IPLLLAVQNG HSEVCRFLLD HGADVNSRDK NGRTALMLAC bmy_21729T0/1-987 PINLKDLDGN IPLLLAVQNG HSEVCRFLLD HGADVNSRDK NGRTALMLAC BACU015025/1-986 PINLKDLDGN IPLLLAVQNG HSEVCRFLLD HGADVNSRDK NGRTALMLAC 201 250 ENSP00000427123/1-983 EIGSSNAVEA LIKKGADLNL VDSLGYNALH YSKLSENAGI QSLLLSKISQ ENSBTAP00000009296/1-979 EIGSSNIVEA LIKKGADLNL VDSLGHNALH YSKLSENAGI QSLLLSKISQ ENSTTRP00000003063/1-928 EIGSSNIVEA LIKKGADLNL VDSLGHNALH YSKLSENAGI QSLLLSKISQ bmy_21729T0/1-987 EIGSSNTVEA LTKKGADLNL VDSLGHNALH YSKLSENAGI QSLLLSKMSQ BACU015025/1-986 EIGSSNTVEA LTKKGADLNL VDSLGHNALH YSKLSENAGI QSLLLSKISQ 251 300 ENSP00000427123/1-983 DADLKTPTKP KQHDQVSKIS SERSGTPKKR KAPPPPISPT QLSDVSSPRS ENSBTAP00000009296/1-979 DADLKTPTKP KQHDQVSKIS SERSGTPKKR KAPPPPISPT QLSDVSSPRS ENSTTRP00000003063/1-928 DADLKTPTKP KQHDQVSKIS SERSGTPKKR KAPPPPISPT QLSDVSSPRS bmy_21729T0/1-987 DADLKTPTKP KQHDQVSKIS SERSGTPKKR KAPPPPISPT QLSDVSSPRS BACU015025/1-986 DADSKTPTKP KQHDQVSKIS SERSGTPKKR KAPPPPISPT QLSDVSSPRS 301 350 ENSP00000427123/1-983 ITSTPLSGKE SVFFAEPPFK -AEISSIREN KDRLSDSTTG ADSLLDISSE ENSBTAP00000009296/1-979 ITSTPLSGKE SVFFAEPPFK -AEISSIREN RDRLSDSTTG ADSLLDVSSE ENSTTRP00000003063/1-928 ITSTPLSGKE SVFFAEPPFK -AEISSIREN KDRLSDSTTG ADSLLDISSE bmy_21729T0/1-987 ITSTPLSGKE SVFFAEPPFK QAEISSIREN KDRLSDSTTG ADSLLDISSE BACU015025/1-986 ITSTPLSGKE SVFFAEPPFK -AEISSIREN KDRLSDSTTG ADSLLDISSE 351 400 ENSP00000427123/1-983 ADQQDLLSLL QAKVASLTLH NKELQDKLQA KSPKEAEADL SFDSYHSTQT ENSBTAP00000009296/1-979 ADQQDLLVLL QAKVASLTLH NKELQDKLQA KTPREGEADL SFDSYHSTQT ENSTTRP00000003063/1-928 ADQQDLLVLL QAKVASLTLH NKELQDKLQA KTPREAEADL SFDFYHSAET bmy_21729T0/1-987 ADQQDLLVLL QAKVASLTLH NKELQDKLQA KTPREAEADL SFDFYHSAET BACU015025/1-986 ADQQDLLVLL QAKVASLTLH NKELQDKLQA KTPREAEADL SFDFYHSAET 401 450 ENSP00000427123/1-983 DLGPSLGKPG ETSPPDSKSS PSVLIHSLGK STTDNDVRIQ QLQEILQDLQ ENSBTAP00000009296/1-979 DLAPSLGKPS ENPPLDSKPS PSVITHSSSK STLDSDVRIQ QLQEVLHDLQ ENSTTRP00000003063/1-928 DLAPSLGKPS ETPPPDSRPS PSVLTHSLSK STIDSDVRIQ QLQEILHDLR bmy_21729T0/1-987 DLAPSLGKPS ETLPPDSKPS PSVLTHSLSQ STIDSDVRIQ QLQEILHDLQ BACU015025/1-986 DLAPSLGKPS ETPPPDSKPS PSVLTHSLSK STIDSDVRIQ QLQEILHDLQ 451 500 ENSP00000427123/1-983 KRLESSEAER KQLQVELQSR RAELVCLNNT EISENSSDLS QKLKETQSKY ENSBTAP00000009296/1-979 KRLESSEAER KQLQAELQTR RTESVCLNNA EISENGSDLS QKLKETQSKY ENSTTRP00000003063/1-928 KKLESSEAER RELQAELQAR RTESVCLNNS EISENGSDLS QKLKETQSKY bmy_21729T0/1-987 KKLESSEAER KQLQAELQAR RTESVCLSNS EISENGSDLS QKLKETQSKY BACU015025/1-986 KKLESSEAER KQLQDELQAR RTESVCLNNS EVSENGSDLS QKLKETQSKY 501 550 ENSP00000427123/1-983 EEAMKEVLSV QKQMKLGLVS PESMDNYSHF HELRVTEEEI NVLKQDLQNA ENSBTAP00000009296/1-979 EEAMKEVLSV QKQMKLGLVS PESVDTYSHL HELRITEEEM DVLKRDLQGA ENSTTRP00000003063/1-928 EEAMKEVLSV QKQMKLGLVS PEGVDTDSGL RELRITEEEI DALKRDLQNA bmy_21729T0/1-987 EEAMKEVLSV QKQMKLGLVS PEGMDTDSGL RELRLTEEEI DVLKRDLQNA BACU015025/1-986 EEAMKEVLSV QKQMKLGLVS PEGMDTDSGL RELRITEEEI DVLKRDLQNA 551 600 ENSP00000427123/1-983 LEESERNKEK VRELEEKLVE REKGTVIKPP VEEYEEMKSS YCSVIENMNK ENSBTAP00000009296/1-979 LEESERNKEK VRELEEKLAE REKEAVIQPP REEYEEMKSS YCTVIENMNK ENSTTRP00000003063/1-928 LEESERNKAR VREMEEKLVE REKGVVMKPP GEEFEEMKSS YCSVIENMNK bmy_21729T0/1-987 LEESERNKEK VRELEEKLVE REQGVVIKPP GEEYEEMKSS YCSVIENMNK BACU015025/1-986 LEESERNKEK VRELEEKLVE RERGVVIRPP GEEYEEMKSS YCSVIENMNK 601 650 ENSP00000427123/1-983 EKAFLFEKYQ EAQEEIMKLK DTLKSQMTQE ASDEAEDMKE AMNRMIDELN ENSBTAP00000009296/1-979 EKAFLFEKYQ EAQEEITKLK DTLKNQMTQE AGDEAEDMKE AMNRMIDELN ENSTTRP00000003063/1-928 EKAFLFEKYQ EAQEEIMKLK DTLKNQMTQE AGDEAGDMKE AMNRMIDELN bmy_21729T0/1-987 EKAFLFEKYQ EAQEEIMKLK DTLKNQMTQE AGDEAGDMKE AMNRMIDELN BACU015025/1-986 EKAFLFEKYQ EAQEEIMKLK DTLKNQMTQE AGDGAGDMKE AMNRMIDELN 651 700 ENSP00000427123/1-983 KQVSELSQLY KEAQAELEDY RKRKSLEDVT AEYIHKAEHE KLMQLTNVSR ENSBTAP00000009296/1-979 KQVSELSQLY KEAQAELEDY RKRKSLEDVT AEYIHKAEHE KLMQVTNVSR ENSTTRP00000003063/1-928 KQVSELSQLY KEAQAELEDY RKRKSLEDVT AEYIHKAEHE KLMQVTSVSR bmy_21729T0/1-987 KQVSELSQLY KEAQAELEDY RKRKSLEDVT AEYIHKAEHE KLMQVTNTSR BACU015025/1-986 KQVSELSQLY KEAQAELEDY RKRKSLEDVT AEYIHKAEHE KLMQVTNISR 701 750 ENSP00000427123/1-983 AKAEDALSEM KSQYSKVLNE LTQLKQLVDA QKENSVSITE HLQVITTLRT ENSBTAP00000009296/1-979 AKAEEALSEM KSQYSKVLNE LTQLKQLVDA QKENSVSITE HLQVITTLRT ENSTTRP00000003063/1-928 AKAEEALCEM KSQYSQVLSE LTQLKQLVDA QKENSVSMTE HLQAITMLRT bmy_21729T0/1-987 AKAEEALSEM KSQHSKVLNE LTQLKQLVDA QKENSVSMTE HLQVITTLRT BACU015025/1-986 AKAEEALSEM KSQYSKVLNE LTQLKQLVDA QKENSVSMTE HLQVITTLRT 751 800 ENSP00000427123/1-983 AAKEMEEKIS NLKEHLASKE VEVAKLEKQL LEEKAAMTDA MVPRSSYEKL ENSBTAP00000009296/1-979 TAKEMEGKIS SLKEHLASKE GEVAKLEKQL LEEKAAMTDA MVPRSAYEKL ENSTTRP00000003063/1-928 TAREMEEKIG SLKEHLASKE GEVAKLEKQL LEEKAAVTDA MVPRSAYEKL bmy_21729T0/1-987 TAKEMEEKLG SLKEHLASKE GEVAKLEKQL LEEKAAVTDA MVPRSAYEKL BACU015025/1-986 AAKEMEEKLG SLKEHLASKE GEVAKLEKQL LEEKAAVTDA MVPRSAYEKL 801 850 ENSP00000427123/1-983 QSSLESEVSV LASKLKESVK EKEKVHSEVV QIRSEVSQVK REKENIQTLL ENSBTAP00000009296/1-979 QSSLESEVSV LASKLRDSVK EKEKAHSEVA QIRSEVSQMK REKENIQTLL ENSTTRP00000003063/1-928 QSSLESEVSV LASKLKDSVK EKEKAHSEVA QIRSEVSQMK RERENIQTLL bmy_21729T0/1-987 QSSLESEVSV LASKLKDSMK EKEKAHSEVA QIRSEVSQMK RERENIQTLL BACU015025/1-986 QSSLESEVSV LASKLKDSVK EKEKAHSEVA QIRSEVSQMK RERENIQTLL 851 900 ENSP00000427123/1-983 KSKEQEVNEL LQKFQQAQEE LAEMKRYAES SSKLEEDKDK KINEMSKEVT ENSBTAP00000009296/1-979 KSKEQEVNEL LQKCQHAQEE LAEMKRHSES SSKLEEDKDK KINEMSKEVT ENSTTRP00000003063/1-928 KSKEQEVNEL LQKCQDAQEE LAEMKRDSES SSKLEEDKDK KIXGVWGD-- bmy_21729T0/1-987 KSKEQEVNEL LQKCQHAQEE LAEMKRDSES SSKLEEDKDK KINEMSKEVA BACU015025/1-986 KSKEQEVNEL LQKCQHAQEE LAEMKRDSES SSKLEEDKDK KINEMSKEVA 901 950 ENSP00000427123/1-983 KLKEALNSLS QLSYSTSSSK RQSQQLEALQ QQVKQLQNQL AECKKQHQEV ENSBTAP00000009296/1-979 KLKEALNSLS QLSYSASSSK RQSQQLEALQ QQVKQLQNQL AECKKQHQEV ENSTTRP00000003063/1-928 ---------- ---------- RRHQ------ ---------- -ECKKQHQEV bmy_21729T0/1-987 KLKEALNSLS QLSYSTSSSK RQSQQLEALQ QQVKQLQHQL AECKKHHQEV BACU015025/1-986 KLKEALNSLS QLSYSTSSSK RQSQQLEALQ QQVKQLQQQL AECKKQHQEV 951 1000 ENSP00000427123/1-983 ISVYRMHLLY AVQGQMDEDV QKVLKQILTM CKNQSQKK ENSBTAP00000009296/1-979 ISVYRMHLLY AVQGQMDEDV QKVLKQILTM CKNQSQKK ENSTTRP00000003063/1-928 ISVYRMHLLY AVQGQMDEDV QKVLKQILTM CKNQSQKK bmy_21729T0/1-987 ISVYRMHLLY AVQGQMDEDV QKVLKQILTM CKNQSQKK BACU015025/1-986 ISVYRMHLLY AVQGQMDEDV QKVLKQILTM CKNQSQKK