KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:37:51 2014 Check: 00 .. Name: ENSTTRP00000012777/1-344 Len: 348 Check: 9538 Weight: 1.00 Name: ENSP00000366527/1-348 Len: 348 Check: 3371 Weight: 1.00 Name: ENSBTAP00000009301/1-348 Len: 348 Check: 2465 Weight: 1.00 Name: bmy_11220T0/1-278 Len: 348 Check: 9322 Weight: 1.00 // 1 50 ENSTTRP00000012777/1-344 MATSLEPEEQ KGLLIVKA-D HYGGQDSISQ KYSPHRRELF RQHFRKLCYQ ENSP00000366527/1-348 MTTALEPEDQ KGLLIIKAED HYWGQDSSSQ KCSPHRRELY RQHFRKLCYQ ENSBTAP00000009301/1-348 MTTFLELEEQ KRLLIVKAED HYRGQDSISQ KSSPHRRELF RQHFRKLCYR bmy_11220T0/1-278 MATSLEPEEQ KGLLIVKA-D HYGGQDSISQ KYSPHRRELF RQHFRKLCYQ 51 100 ENSTTRP00000012777/1-344 DAPGPREALT QLWELCHQWL RPECHTKEQI LDLLVLEQFL SILPRDLQAW ENSP00000366527/1-348 DAPGPREALT QLWELCRQWL RPECHTKEQI LDLLVLEQFL SILPKDLQAW ENSBTAP00000009301/1-348 DAPGPREALI QLWDLCRQWL RPECHTKEQI LDLLVLEQFL SILPRDLQAW bmy_11220T0/1-278 DAPGPREALT QLWELCHQWL RPECHTKEQI LDLLVLEQFL SILPRDLQAW 101 150 ENSTTRP00000012777/1-344 VQAHHPETGE EAVTVLEDLE RELDEPRKQX XXXXXXXXXX XXXXXXXXXX ENSP00000366527/1-348 VRAHHPETGE EAVTVLEDLE RELDEPGKQV PGNSERRDIL MDKLAPLGRP ENSBTAP00000009301/1-348 VQAHHPETGE EAVIVLEDLE RELDEPRKQV PGNSERQDTL LDKLAPLRRP bmy_11220T0/1-278 VQAHHPETGE EAVTVLEDLE RELDEPRKQV PANSERQDTL LDKLAPLRRP 151 200 ENSTTRP00000012777/1-344 XXXXXXXXXX XXXXXXXXXX XXXXXXDKTK TKNEELSQKE DIPKDMEFLG ENSP00000366527/1-348 YESLTVQLHP KKTQLEQEAG KPQRNGDKTR TKNEELFQKE DMPKDKEFLG ENSBTAP00000009301/1-348 HESLTIQLHP KKTCQEQKSG EAQRNGDETK TNTEELSQKE DKSKDMEFFG bmy_11220T0/1-278 HESLTIQLHP KKTQQEQESG EPQRNGDKTK TKNEELSQKE DIPKDMDFLG 201 250 ENSTTRP00000012777/1-344 EINNRLTKAI ---PESKDAI ESEGRFEWQQ RERRRYKCDD CGKSFSHSSD ENSP00000366527/1-348 EINDRLNKDT PQHPKSKDII ENEGRSEWQQ RERRRYKCDE CGKSFSHSSD ENSBTAP00000009301/1-348 KINDRLNKDI LQYPESKDAF ESEGIFKWQQ RKRRCYKCDD CGKSFSHSSD bmy_11220T0/1-278 KINNRLTKAI PQYPVSKDAI XSEGRFEWQQ RERRRYKCDD CGKSFSHSSD 251 300 ENSTTRP00000012777/1-344 LSKHRRTHTG EKPYKCDECG KAFIQHSHLI GHHRVHTGVK PYKCKECGKD ENSP00000366527/1-348 LSKHRRTHTG EKPYKCDECG KAFIQRSHLI GHHRVHTGVK PYKCKECGKD ENSBTAP00000009301/1-348 LSKHRRTHTG EKPYKCDECG KSFIQRSHLI GHHRVHTGVK PYKCKECGKD bmy_11220T0/1-278 LSKHRRTHTG EKPYKCDECG KAFIQHSHL- ---------- ---------- 301 350 ENSTTRP00000012777/1-344 FSGRTGLIQH QRIHTGEKPY ECDECGRPFR VSSALIRHQR IHTANKLY ENSP00000366527/1-348 FSGRTGLIQH QRIHTGEKPY ECDECGRPFR VSSALIRHQR IHTANKLY ENSBTAP00000009301/1-348 FSGRTGLIQH QRIHTGEKPY ECDECGRPFR VSSALIRHQR IHTANKLY bmy_11220T0/1-278 ---------- ---------- ---------- ---------- --------