KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:51 2014 Check: 00 .. Name: ENSP00000260643/1-417 Len: 435 Check: 4347 Weight: 1.00 Name: ENSBTAP00000009307/1-418 Len: 435 Check: 4112 Weight: 1.00 Name: ENSTTRP00000004943/1-417 Len: 435 Check: 5380 Weight: 1.00 Name: bmy_01073T0/1-434 Len: 435 Check: 6064 Weight: 1.00 Name: BACU014545/1-429 Len: 435 Check: 4057 Weight: 1.00 // 1 50 ENSP00000260643/1-417 MGRRRAPELY RAPFPLYALQ VDPSTGLLIA AGGGGAAKTG IKNGVHFLQL ENSBTAP00000009307/1-418 MGRRRTPELY RAPFPLYALR VDPSAGLLIA AGGGGAAKTG IKNGVHFLQL ENSTTRP00000004943/1-417 MGRRRAPELY RAPFPLYALQ VDPSAGLLIA AGGGGAAKTG IKNGVHFLQL bmy_01073T0/1-434 MGRRRAPELY RAPFPLYALQ VDPSAGLLIA AGGGGAAKTG IKNGVHFLQL BACU014545/1-429 MGRRRAPELY RAPFPLYALQ VDPSAGLLIA AGGGGAAKTG IKNGVHFLQL 51 100 ENSP00000260643/1-417 ELINGRLSAS LLHSHDTETR ATMNLALAGD ILAAGQDAHC QLLRFQAHQQ ENSBTAP00000009307/1-418 EQINGRLSAS LLHSHDTETR ATMNLALAGN ILAAGQDAHC QLLRFQIHQQ ENSTTRP00000004943/1-417 EQINGRLSAS LLHSHDTETR ATMNLALAGN ILAAGQDAHC QLLRFQIHQQ bmy_01073T0/1-434 EQINGRLSAS LLHSHDTETR ATMNLALAGN ILAAGQDAHC QLLRFQTHQQ BACU014545/1-429 EQINGRLSAS LLHSHDTETR ATMNLALAGN ILAAGQDAHC QLLRFQTHQQ 101 150 ENSP00000260643/1-417 QG-NKAEKAG SKEQGPRQRK GAAPAEKKCG AETQHEGLEL RVENLQAVQT ENSBTAP00000009307/1-418 KGKNKAEKAG SKEQGPRQRK GAAPAEKKSG AETHQEGVEF SVENLHEVQT ENSTTRP00000004943/1-417 KSKNKAGKAG SKEQGPRQRK GAAPAE-KSG AETHQEEIEF SVENLQAVQT bmy_01073T0/1-434 KSKNKAEKAG SKEQGLRQRK RAAPAE-KSG AETHQEEVEF SVENLQAVQT BACU014545/1-429 KSKNKAEKAG SKEQGPRQRK RAAPAE-KSG AETHQEEVEF SVEDLQAVQT 151 200 ENSP00000260643/1-417 DFSSDPLQKV VCFNHDNTLL ATGGTDGYVR VWK-----VP SLEKVLEFKA ENSBTAP00000009307/1-418 DFSRDPLQKV VCFNHDNTLL ATGGTDGCVR VWK-----VP TLEKVLEFKA ENSTTRP00000004943/1-417 DFSTDPLQKV VCFNHDSTLL ATGGTDGYVR VWK-----VP TLEKVLEFRA bmy_01073T0/1-434 DFGPDPLQKV VCFNHDNTLL ATGGTDGYVR VWKVWFGEVP TLEKVLEFRA BACU014545/1-429 DFGPDPLQKV VCFNHDNTLL ATGGTDGYVR VWK-----VP TLEKVLEFRA 201 250 ENSP00000260643/1-417 HEGEIEDLAL GPDGKLVTVG RDLKASVWQK DQLVTQLHWQ ENGPTFSSTP ENSBTAP00000009307/1-418 HEGEIEDLAL GPDGKLVTVG WDLKASVWQK DQLVTQLHWQ ENGPTFSNTP ENSTTRP00000004943/1-417 HEGEIEDLAL GPDGKLVTVG WDLKASVWQK DQLVTQLHWQ ENGPTFSNTP bmy_01073T0/1-434 HEGEIEDLAL GPDGKLVTVG WDLKASVWQK DQLVTQLHWQ ENGPTFSNTP BACU014545/1-429 HEGEIEDLAL GPDGKLVTVG WDLKASVWQK DQLLTQLHWQ ENGPTFSNTP 251 300 ENSP00000260643/1-417 YRYQACRFGQ VPDQPAGLRL FTVQIPHKRL RQPPPCYLTA WDGSNFLPLR ENSBTAP00000009307/1-418 YRYQACRFGQ VPDQPAGLRL FTVQIPHKRL RQPPPCYLTA WDGSTFLPLR ENSTTRP00000004943/1-417 YRYQACRFGQ VPDQPAGLRL FTVQIPHKRL RQPPPCYLTA WDGSTFLPLR bmy_01073T0/1-434 YRYQACRFGQ VPDQPAGLRL FTVQIPHKRL RQPPPCYLTA WDGSTFLPLR BACU014545/1-429 YRYQACRFGQ VPDQPAGLRL FTVQIPHKRL RQPPPCYLTA WDGSTFLPLR 301 350 ENSP00000260643/1-417 TKSCGHEVVS CLDV------ ------SESG TFLGLGTVTG SVAIYIAFSL ENSBTAP00000009307/1-418 TRPCGHEVIS CLSV------ ------SESG TFLGLGTVTG SVAIYIAFSL ENSTTRP00000004943/1-417 TKSCGHEVIS CLSV------ ------SESG TFLGLGTVTG SVAIYIAFSL bmy_01073T0/1-434 TKSCGHEVIS CLSVRLQDSE HFIVCCSESG TFLGLGTVTG SVAIYIAFSL BACU014545/1-429 TKSCGHEVIS CLSVRLQDSE HFIVCCSESG TFLGLGTVTG SVAIYIAFSL 351 400 ENSP00000260643/1-417 QCLYYVREAH GIVVTDVAFL PEKGRGPELL GSHETALFSV AVDSRCQLHL ENSBTAP00000009307/1-418 QRLYYVKEAH GIVVTDVAFL PEKGRGPELL GSHETALFSV AVDSRCQLHL ENSTTRP00000004943/1-417 QRLYYMKEAH GIVVTDVAFL PEKGRGPELL GSQETALFSV AVDSRCQLHL bmy_01073T0/1-434 QRLYYVKEAH GIVVTDVAFL PEKGRGPELL GSQETALFSV AVDSRCQLHL BACU014545/1-429 QRLYYVKEAH GIVVTDVAFL PEKGRGPELL GSQETALFSV AVDSRCQLHL 401 450 ENSP00000260643/1-417 LPSRRSVPVW LLLLLCVGLI IVTILLLQSA FPGFL ENSBTAP00000009307/1-418 LPSRRSAPVW LLLLLCVGLI VMTILLLQSA FPGFL ENSTTRP00000004943/1-417 LPSRRSVPIW LLLLLCVGLI VVTILLLQRA FPAFL bmy_01073T0/1-434 LPSRRSVPIW LLLLLCVGLI VMTILLLQRA FPAFL BACU014545/1-429 LPSRRSVPVW LLLLLCVGLI VMTILLLQRA FPAFL