KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:37:53 2014 Check: 00 .. Name: ENSP00000331532/1-384 Len: 419 Check: 358 Weight: 1.00 Name: ENSBTAP00000009312/1-377 Len: 419 Check: 8000 Weight: 1.00 Name: bmy_11364T0/1-352 Len: 419 Check: 3172 Weight: 1.00 Name: ENSTTRP00000005949/1-385 Len: 419 Check: 8885 Weight: 1.00 // 1 50 ENSP00000331532/1-384 MGVTGAHGFP CCGKGSVEVA EMRDDLSQHQ IQEEQELEAD MLEQ------ ENSBTAP00000009312/1-377 MGVTGANGFP CCGKESVDIM DSQGDINQNQ FQPIQEEDDM EQAQ--PQLP bmy_11364T0/1-352 MGDGEDFGGQ APPQLSVE-- ---------T FQLEKELLEL EPPD------ ENSTTRP00000005949/1-385 MGVTGANGFP CCDKESVDIV DTQGGINQNQ FQSVQEEDDM ELEDLVHESL 51 100 ENSP00000331532/1-384 KPQLQVD--- ---------- LDLDPDPDPD PELEIGQVPA LLESELYPA- ENSBTAP00000009312/1-377 VETFQLENEL LEPGLPEEKL PQVEPEQKPK P--------- FPQTE----- bmy_11364T0/1-352 KEVLRLD--- ---------- RELEPERKPK P--------- FPQPEMRPVV ENSTTRP00000005949/1-385 QEVPRLD--- ---------- PELEPERKPK P--------- FPQPEVRPLV 101 150 ENSP00000331532/1-384 -LKLEAELDT EAN---SNEE SDFEEPMQLV CKIESVHSNM GLPTPQTFRP ENSBTAP00000009312/1-377 ---PEAK--- ---------- --QEDPKPQG YREEFPQPYG DGLTKPDIRQ bmy_11364T0/1-352 MLKPEAKLDT EPKLKVVNLE PFSEDPEPQG HETESLHPYM EGLMQQDISR ENSTTRP00000005949/1-385 MLQPEAKLDT EPKMKVVNLE PFSEDPEPQG YKTESLHPYM EGLMQQDISQ 151 200 ENSP00000331532/1-384 WSLNSNCR-- SFTEENHVSA CHHSISAQTS KHLFWANKLI QASEHSLQRA ENSBTAP00000009312/1-377 LSMRSNSSYV SSMDED---- -YRSIHVQTS RHLFWVDRLI QVSEHSLQPV bmy_11364T0/1-352 WSMRSNSSYL STTEEDPVST DHRSLCVQTS KHLFWADKFI QASEHSLQQA ENSTTRP00000005949/1-385 WSMRSISSYP STTEEDPLST DHRSICVQTS KHFFWADKFV QASEHSLQQA 201 250 ENSP00000331532/1-384 INMQLNNGSA GQPIRSPLRE AIPTNALCSE EQLQIPDAHS APPTTSSQAP ENSBTAP00000009312/1-377 ISTQPFQKST KKTTICPAQQ TVPKDTESSK KQSQNPSAQQ GPLDKASQKT bmy_11364T0/1-352 ISMQPIKEST KETTCHPDQP SAPKDTVCSK KQSQAHSAQP ALPDKVSQQP ENSTTRP00000005949/1-385 ISMQPIKEST KETACHPDQP SAPKDTVCSE KQSQAPSAQP ALPDEVSQQP 251 300 ENSP00000331532/1-384 SPLLSSDLPP PIDLTELITF ASSLAMASSS RMDLPSLEHM MKAPPQEALE ENSBTAP00000009312/1-377 LSPEPSFCTP TMGLEELINF ASTLAMASSS RMDLPRLQHM IKTTPQKAMP bmy_11364T0/1-352 PSPQPSPSPQ TISLADLINF ASSLAMASSS RMDLPNLGHV IKAPLQMAMT ENSTTRP00000005949/1-385 PSPQPS-LPQ TIGLAELIDF ASSLAMASSS RMDLPNLGHV IKAPLQMDMT 301 350 ENSP00000331532/1-384 PSTEPLLT-- ---TVEEREP ENHA----ET LPEKPREARA PLKSWSQEDK ENSBTAP00000009312/1-377 PPTEPAVDHA AQPTTDEPEQ GKLTKD--EK PPEEPGEARK PQDAPKQEDE bmy_11364T0/1-352 PSTEPTVDHT AQPTVEEPEQ ENLTKDVLEK PPEEPLEARE PQDASKQEDK ENSTTRP00000005949/1-385 LSTEPTVDHT AQPTVDEPEQ ENLP----EK PPEEPRETRE PHDASKQEDK 351 400 ENSP00000331532/1-384 NFAQSYFDFS KPGIKRATIK GQIQLLQPPA TSPLLQGSKE DSVPPGKEKE ENSBTAP00000009312/1-377 DVPHPYLDLR KPGFKRATIE GELKFLQSPT TSPQPKGAAK DSV-PGTMKG bmy_11364T0/1-352 DFPHPYLDFS KPGFKRATIE GEVKFLQPPN MSPQPQGAGK E--------- ENSTTRP00000005949/1-385 HFPHPYLDFS KLGFKKATIE GEVKFLQPPN MSPQPQGAGK DS------GG 401 450 ENSP00000331532/1-384 NPLLVKIHFK LSAPTIPEK ENSBTAP00000009312/1-377 NPLFLKIHFK LSSPSSPEK bmy_11364T0/1-352 ---------- --------- ENSTTRP00000005949/1-385 GPLLLKIHFK LSSPTSPE-