KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:53 2014 Check: 00 .. Name: BACU005177/1-272 Len: 272 Check: 3941 Weight: 1.00 Name: ENSP00000226798/1-258 Len: 272 Check: 4350 Weight: 1.00 Name: ENSBTAP00000009325/1-258 Len: 272 Check: 3717 Weight: 1.00 Name: bmy_00280T0/1-248 Len: 272 Check: 1827 Weight: 1.00 Name: ENSTTRP00000003217/1-258 Len: 272 Check: 3261 Weight: 1.00 // 1 50 BACU005177/1-272 MAEYSYVKPT KLVLKGTKAK SKKKKSKEKK RKREEDEEIQ LDIVGIWWTV ENSP00000226798/1-258 MAEYSYVKST KLVLKGTKTK SKKKKSKDKK RKREEDEETQ LDIVGIWWTV ENSBTAP00000009325/1-258 MAEYSYVKST KLVLKGTKAK SKKKKSKEKK RKREEDEETQ LDIVGIWWTV bmy_00280T0/1-248 MAEYSYVKPT KLVLKGTKAK SKKKKSKEKK RKREEDEEIQ LDIVGIWWTV ENSTTRP00000003217/1-258 MAEYSYVKPT KLVLKGTKAK SKKKKSKEKK RKREEDEEIQ LDIVGIWWTV 51 100 BACU005177/1-272 TNFGEISGTI AIEMDKGTYI HALDNGLFTL GAPHKEVDEG PSPPEQFTAV ENSP00000226798/1-258 TNFGEISGTI AIEMDKGTYI HALDNGLFTL GAPHKEVDEG PSPPEQFTAV ENSBTAP00000009325/1-258 TNFGEISGTI AIEMDKGTYI HALDNGLFTL GAPHKEVDEG PSPPEQFTAV bmy_00280T0/1-248 TNFGEISGTI AIEMDKGTYI HALDNGLFTL GAPHKEVDEG PSPPEQ---- ENSTTRP00000003217/1-258 TNFGEISGTI AIEMDKGTYI HALDNGLFTL GAPHKEVDEG PSPPEQFTAV 101 150 BACU005177/1-272 KLSDSRIALK SGYGKYLGIN SDGLVVGRSD AIGPREQWEP VFQDGKMALL ENSP00000226798/1-258 KLSDSRIALK SGYGKYLGIN SDGLVVGRSD AIGPREQWEP VFQNGKMALL ENSBTAP00000009325/1-258 KLSDSRIALK SGYGKYLGIN SDGLVVGRSD AIGPREQWEP VFQDGKMALL bmy_00280T0/1-248 ------IALK SGYGKYLGIN SDGLVVGRSD AIGPREQWEP VFQDGKMALL ENSTTRP00000003217/1-258 KLSDSRIALK SGYGKYLGIN SDGLVVGRSD AIGPREQWEP VFQDGKMALL 151 200 BACU005177/1-272 ASNSCFIRCN EAGDIEAKSK TAGEEEMIKI RSCAERETKQ KDDIPEEDKG ENSP00000226798/1-258 ASNSCFIRCN EAGDIEAKSK TAGEEEMIKI RSCAERETKK KDDIPEEDKG ENSBTAP00000009325/1-258 ASNSCFIRCN EAGDIEAKSK TAGEEEMIKI RSCAERETKK KDDIPEEDKG bmy_00280T0/1-248 ASNSCFIRCN EAGDIEAKSK TAGEEEMIKI RSCAERETKK KDDIPEEDKG ENSTTRP00000003217/1-258 ASNSCFIRCN EAGDIEAKSK TAGEEEMIKI RSCAERETKK KDDIPEEDKG 201 250 BACU005177/1-272 NVKQCEINYV KKFQSFQDHK LKISKEDSKV LKKARKDGFL HETLLDSFEC ENSP00000226798/1-258 NVKQCEINYV KKFQSFQDHK LKISKEDSKI LKKARKDGFL HETLLDR--- ENSBTAP00000009325/1-258 NVKQCEINYV KKFQSFQDHK LKISKEDSKI LKKARKDGFL HETLLDR--- bmy_00280T0/1-248 NVKQCELNYV KKFQSFQDHK LKISKEDSKI LKKARKDGFL HETLLDR--- ENSTTRP00000003217/1-258 NVKQCEINYV KKFQSFQDHK LKISKEDSKI LKKARKDGFL HETLLDR--- 251 300 BACU005177/1-272 GGITLKGHHK SGKRSPRKNI WK ENSP00000226798/1-258 -----RAKLK ADRYCK---- -- ENSBTAP00000009325/1-258 -----RAKLK ADRYCK---- -- bmy_00280T0/1-248 -----RAKLK ADRYCK---- -- ENSTTRP00000003217/1-258 -----RAKLK ADRYCK---- --