KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:37:57 2014 Check: 00 ..
Name: ENSTTRP00000011196/1-916 Len: 917 Check: 9538 Weight: 1.00
Name: ENSP00000307461/1-916 Len: 917 Check: 1484 Weight: 1.00
Name: ENSBTAP00000009330/1-917 Len: 917 Check: 8475 Weight: 1.00
Name: bmy_17288T0/1-917 Len: 917 Check: 2783 Weight: 1.00
Name: BACU016015/1-917 Len: 917 Check: 4442 Weight: 1.00
//
1 50
ENSTTRP00000011196/1-916 METNQETSLF LVKILEELDS KQNTVSYQDL CKSLCTRFDL SQLSKLRSVL
ENSP00000307461/1-916 METSQETSLF LVKILEELDS KQNTVSYQDL CKSLCARFDL SQLAKLRSVL
ENSBTAP00000009330/1-917 METNQETSLF LVKILEELDS KQNTVSYQDL CKSLCARFDL SQLAKLRSVL
bmy_17288T0/1-917 METNQETSLF LVKILEELDS KQNTVSYQDL CKSLCARFDL SQLSKLRSVL
BACU016015/1-917 METNQETSLF LVKILEELDS KQNTVSYQDL CKSLCARFDL SQLSKLRSVL
51 100
ENSTTRP00000011196/1-916 FYTACLDPNF PATLFKDKMK CTVNNQQSKK IMVAADIVTI FNLIQMNGAT
ENSP00000307461/1-916 FYTACLDPNF PATLFKDKMK CTVNNQQSKK IMVAADIVTI FNLIQMNGGA
ENSBTAP00000009330/1-917 FYTACLDPNF PATLFKDKMK CAVNNQQSKK IMVAADIVTI FNLIQMNGGA
bmy_17288T0/1-917 FYTACLDPNF PATLFKDKMK CTVNNQQSKK IMVAADIVTI FNLIQMNGAT
BACU016015/1-917 FYTACLDPNF PATLFKDKMK CTVNNQQSKK IMVAADIVTI FNLIQMNGAT
101 150
ENSTTRP00000011196/1-916 AKEKLPSGRQ KMRKKEAAFD LGRSDTELCT AAQCESLSCE LSDQPFSRGY
ENSP00000307461/1-916 AKEKLPTGRQ KVRKKEASFE SCRSDTEICN AAECEPLNCE LSERSFSRGY
ENSBTAP00000009330/1-917 AKEKLPGGRQ KMRKKDASFD SCRSDTEICS AAECEPLNCE LSDRPFSRGY
bmy_17288T0/1-917 AKEKLPSARQ KMCKKEASFD SGRSDTELCT AAECESLSCE LSDQPFSRGY
BACU016015/1-917 AKEKLPSGRQ KMRKKEASFD SGRSDTELCT AAECESLSCE LSDQPFSRGY
151 200
ENSTTRP00000011196/1-916 PTRQSSKCRK MDCKDCPQFV PASEPNFLLG VSKDVKNRAA SLDRLQALAP
ENSP00000307461/1-916 PIRQSSKCRK MDCKDCPQFV PASEPNFLLG VSKEVKNRAA SLDRLQALAP
ENSBTAP00000009330/1-917 PTRQSSKCRK VDCKDCPQFI PASEPNFLLG VSKDVKNRAA SLDRLQALAP
bmy_17288T0/1-917 PTRQSSKCRK MDCKDCPQFV PASEPNFLLG VSKDVKNRAA SLDRLQALAP
BACU016015/1-917 PTRQSSKCRK MDCKDCPQFV PASEPNFLLG VSKDVKNRAA SLDRLQALAP
201 250
ENSTTRP00000011196/1-916 YSVASPQPCE MQRTYFPMNI ESESMSDQDS LPLTQGIKET FISNEEPFVV
ENSP00000307461/1-916 YSVTSPQPCE MQRTYFPMNI ENESISDQDS LPINQSIKET FISNEEPFVV
ENSBTAP00000009330/1-917 YSVASPQPCE MQRTYFPMNL ESESMSDQDS LPLPQGIKQT FISNDEPFVV
bmy_17288T0/1-917 YSVASPQPCE MQRTYFPMNI ESESMSDQDS LPLTQGIKET FISNEEPFVV
BACU016015/1-917 YSVASPQPCE MQRTYFPMNI ESESMSDQDS LPLTQGIKET FISNEEPFVV
251 300
ENSTTRP00000011196/1-916 QSCVQKRNIF KEEFHNLMTV SPELASPANK AEGERGKPQG RKESHKTPFP
ENSP00000307461/1-916 QSCVQKRNIF KEDFHNLMAV SPSLVGPISK AENEHREPQS RKEPHKPPFF
ENSBTAP00000009330/1-917 QSCVQKRNIF KEDFHNLMAV SPGLASPANK AEGEHRKSQG RKESHKTPFP
bmy_17288T0/1-917 QSCVQKRNIF KEDFHNLMTV SPGLASPANK AEGEHGKPQG RKESHKTPFP
BACU016015/1-917 QSCVQKRNIF KEDFHNLMTV SPGLASPANK AEGEHGKPQG RKESHKTPFP
301 350
ENSTTRP00000011196/1-916 NHSFEMPYNS QYLNPEYSPV PDKRRAKHES LDDLQASTYF GPTPVMGTQE
ENSP00000307461/1-916 NHSFEMPYNS QYLNPVYSPV PDKRRAKHES LDDLQASTYF GPTPVMGTQE
ENSBTAP00000009330/1-917 HHSFEMPYSS QYLNPEYSPV PDKRRAKHES LDDLQASTYF GPTPVMGPQE
bmy_17288T0/1-917 NHSFEMPYNS QYLNPEYSPV PDKRRAKHES LDDLQASTYF GPTPVMGTQE
BACU016015/1-917 NHSFEMPYNS QYLNPEYSPV PDKRRAKHES LDDLQTSTYF GPTPVMGTQE
351 400
ENSTTRP00000011196/1-916 ARRCPGRPGK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000307461/1-916 ARRCLGKPNK QTPWPAKSWS LNTEEVPDFE RSFFNRNPSE EKLHYPNASS
ENSBTAP00000009330/1-917 ARRCPGKTGK QTPWPAKSWS LNTEEVPDFE RSFFNRNPSE EKLRYPNSNS
bmy_17288T0/1-917 ARRCPGRPGK QTPWPAKSWS LNTEEVPDFE RSFFNRNPSE EKLRYPNPSS
BACU016015/1-917 ARRCPGRPGK QTPWPAKSWS LNTEEVPDFE RSFFNRNPSE EKLRYPNPSS
401 450
ENSTTRP00000011196/1-916 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000307461/1-916 QTPNFPAPER RPTYLVPKDQ QPILPIAYAA KQNGLKSKEI SSPVDLEKHE
ENSBTAP00000009330/1-917 QTPNFPTPDR CPAYLTPQDQ QPILPVGYSA KPNGLKSKEI PSPVDLEKHE
bmy_17288T0/1-917 QTPNFPTPDR RPAYLMPQEQ QPILPVGYAA KPNGLKSKEI SSPVDLEKHE
BACU016015/1-917 QTPNFPTPDR CPAYLMLQEQ QPILPVGYAA KPNGLKSKEI SSPVDLEKHE
451 500
ENSTTRP00000011196/1-916 XXXXXXXXXX XXXXXXXXXX XXXXXXXXX- XXXXXXXXXX XXXXXXXXXX
ENSP00000307461/1-916 PVKKFKDKSI NCTSGQLSSD TSSVGTQTE- HVLEPKKCRD LCTSGQGKYS
ENSBTAP00000009330/1-917 PVKKFKDKSI SCTSGQLSSD TSSVGTQTDL HVLEPKKGKD LCTPGQGKYS
bmy_17288T0/1-917 PVKKFKDKSI SCTSRQLSSD TSSVGTQTEQ HVLEPKKYKD SCASGQGKYS
BACU016015/1-917 PVKKFKDKSI SCTSRQLSSD TSSVGTQTEQ HVLEPKKCKD LCASGQGKYS
501 550
ENSTTRP00000011196/1-916 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000307461/1-916 DRHTMKHSDD DSEIVSDDIS DIFRFLDDMS ISGSTGVIQS SCYNSTGSLS
ENSBTAP00000009330/1-917 DRHAVKHSDD DSEVVSDDIS DIFRFLDDMS ISGSTGVMQS SCYNSTGSLS
bmy_17288T0/1-917 DRHAMKQSDD DSEVVSDDIS DIFRFLDDMS ISGSTGVIQS SCYNSTGSLS
BACU016015/1-917 DRHAMKQSDD DSEVVSDDIS DIFRFLDDMS ISGSTGVVQS SCYNSTGSLS
551 600
ENSTTRP00000011196/1-916 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000307461/1-916 QLHKSDCDSS PEHNLTKIAN GVPNSKGDKG NRPENTHHSE EELKTSVCKL
ENSBTAP00000009330/1-917 QLHKSDCDSS PEHHLTRIAN GLPSSQGEKG SRPENSHHSE EELKTSVCKL
bmy_17288T0/1-917 QLHKSDCDSS PEHNLTKIAN GLPSSKGEKG NRPENSHHSE EELKTSVCKL
BACU016015/1-917 QLHKSDCDSS PEHNLTKIAN GLPSSKGEKG NRPENSHHSE EELKTSVCNL
601 650
ENSTTRP00000011196/1-916 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000307461/1-916 VLRIGEIERK LESLSGVRDE ISQVLGKLNK LDQKMQQPEK VSVQIDLNSL
ENSBTAP00000009330/1-917 VLRIGEIERK LESLSGVREE ISQVLGKLNK LDQKMQQPEK VSVQIDLNSL
bmy_17288T0/1-917 VLRIGEIERK LESLSGVREE ISQVLGKLNK LDEKIQQPEK VSVQIDLNSL
BACU016015/1-917 VLRIGEIERK LESLSGVREE ISQVLGKLNR LDEKIQQPEK VSVQIDLNSL
651 700
ENSTTRP00000011196/1-916 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000307461/1-916 TSEGPSDDSA SPRMFHAHSG SHGPKLENNP DWCCSDASGS NSESLRVKAL
ENSBTAP00000009330/1-917 TSEAPSDESA SPRMFRAHKG AHGPKLENTA DWCCSDASGS NSESLRVQAL
bmy_17288T0/1-917 TSEAPSDESA SPRMFRAHNG SHGPKLENSA DWCCSDASGS NSESLRVKAL
BACU016015/1-917 TSEAPSDESA SPRMFRAHNG SHGPKLENSA DWCCSDASGS NSESLRVKAL
701 750
ENSTTRP00000011196/1-916 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXDWRTITYT NRVGVGEEDV
ENSP00000307461/1-916 KKSLFTRPSS RSLTEENSAT ESKIASISNS PRDWRTITYT NRVGLNEEEI
ENSBTAP00000009330/1-917 KKSLFTRPSS RSLTEENSAT ESKIASISNS PRDWRTITYS NRMGISEEEI
bmy_17288T0/1-917 KKSLFTRPSS RSLTEENSAT ESKIASISNS PRDWRTITYT SRVGVGEEDV
BACU016015/1-917 KKSLFTRPSS RSLTEENSAT ESKIASISNS PRDWRTITYT SRVGVGEEDV
751 800
ENSTTRP00000011196/1-916 KDRGPGESKD WHRKSKEADR QYDIPPQHRL PKQPKDGFLV EQVFSPHPYP
ENSP00000307461/1-916 KDTGPGDNKD WHRKSKEADR QYDIPPQHRL PKQPKDGFLV EQVFSPHPYP
ENSBTAP00000009330/1-917 KERGPGDSKD WHRKSKEADR QYDIPPQHRL PKQPKDGFLV EQVFSPHPYP
bmy_17288T0/1-917 KDRGPGESKD WHRKSKEADR QYDMPPQHRL PKQPKDGFLV EQVFSPHPYP
BACU016015/1-917 KDRGPGESKD WHRKSKEADR QYDMPPPHRL PKQPKDGFLV EQVFSPHPYP
801 850
ENSTTRP00000011196/1-916 ASLKAHMKNN PLYTDMRLTE LAEVKRGQPS WTIEEYARNA GEKGKLTALD
ENSP00000307461/1-916 ASLKAHMKSN PLYTDMRLTE LAEVKRGQPS WTIEEYARNA GDKGKLTALD
ENSBTAP00000009330/1-917 ASLKAHMKSN PLYTDMRLTE LAEVKRGQPS WTIEEYARNS GDKGKLTALD
bmy_17288T0/1-917 ASLKAHMKNN PLYTDMRLTE LAEVKRGQPS WTIEEYSRNA GEKGKLTALD
BACU016015/1-917 ASLKAHMKNN PLYTDMRLTE LAEVKRSQPS WTIEEYSRNA GEKGKLTALD
851 900
ENSTTRP00000011196/1-916 LQTQESLNPN NLEYWMEDIY TPGYDSLLKR KEAEFRRAKV CKIAALIAAA
ENSP00000307461/1-916 LQTQESLNPN NLEYWMEDIY TPGYDSLLKR KEAEFRRAKV CKIAALIAAA
ENSBTAP00000009330/1-917 LQTQESLNPN NLEYWMEDIY TPGYDSLLKR KEAEFRRAKV CKIAALIAAA
bmy_17288T0/1-917 LQTQESLNPN NLEYWMEDIY TPGYDSLLKR KEAEFRRAKV CKIAALIAAA
BACU016015/1-917 LQTQESLNPN NLEYWMEDIY TPGYDSLLKR KEAEFRRAKV CKIAALIAAA
901 950
ENSTTRP00000011196/1-916 TCTVILVIVV PICTMKS
ENSP00000307461/1-916 ACTVILVIVV PICTMKS
ENSBTAP00000009330/1-917 ACTVILVIVV PICTMKS
bmy_17288T0/1-917 TCTVILVIVV PICTMKS
BACU016015/1-917 TCTVILVIVV PICTMKS