KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:57 2014 Check: 00 .. Name: ENSP00000288014/1-230 Len: 230 Check: 1643 Weight: 1.00 Name: ENSBTAP00000009334/1-219 Len: 230 Check: 6492 Weight: 1.00 Name: ENSTTRP00000010107/1-229 Len: 230 Check: 4901 Weight: 1.00 Name: bmy_13909T0/1-219 Len: 230 Check: 7625 Weight: 1.00 Name: BACU008658/1-219 Len: 230 Check: 8063 Weight: 1.00 // 1 50 ENSP00000288014/1-230 MAQGLIEVER KFLPGPGTEE RLQELGGTLE YRVTFRDTYY DTPELSLMQA ENSBTAP00000009334/1-219 MAQGLIEVER KFVPGPSTEE RLQELGGTLE HRVTFRDSYY DTPELSLMRA ENSTTRP00000010107/1-229 MAQGLIEVER KFVPSPGTEE RLQELGGTLE RRVTFRDSYY DTPELSLMRA bmy_13909T0/1-219 MAPGLIEVER KFVPGPGTEE RLQELGGTLE RRVTFRDSYY DTPELSLMRA BACU008658/1-219 MAQGLIEVER KFVPGPGTEE RLQELGGTLE RRVTFRDSYY DTPELSLMRA 51 100 ENSP00000288014/1-230 DHWLRRREDS GWELKCPGAA GVLGPHTEYK ELTAEPTIVA QLCKVLRADG ENSBTAP00000009334/1-219 DYWLRQREGS GWELKCPGAA GVSGPHTEYT ELTAEPSIVA QLCEVLGAEV ENSTTRP00000010107/1-229 DYWLRQREGS GWELKCPGAA SVSGPHTKYM ELTAEPAVVA QLCEVLRAEV bmy_13909T0/1-219 DYWLRQREGS GWELKCPGAA SVSGPHTEYM ELTAEPXVVA QLCEVLRAEV BACU008658/1-219 NYWLRQREGS GWELKCSGAA SVSGPHTEYM ELTAEPAVVA QLCEVLRAEV 101 150 ENSP00000288014/1-230 LGAGDVAAVL GPLGLQEVAS FVTKRSAWKL VLLGADEEEP QLRVDLDTAD ENSBTAP00000009334/1-219 PGAGGVAAVL GPLGLQLVAS FVTKRSAWKL VLSGADGEER LLRVDLDTAD ENSTTRP00000010107/1-229 PGAGGVAAVL GPLGLQEVAS FVTKRSAWKL VPRGADEEER PLRVDLDTAD bmy_13909T0/1-219 PGAGGVAAVL GPLGLQEVAS FVTKRSAWKL VLRGADEEEP PLRVDLDTAD BACU008658/1-219 PGAGGVAAVL GPLGLQEVAS FVTKRSAWKV VLHGADEEEP PLRVDLDTAD 151 200 ENSP00000288014/1-230 FGYAVGEVEA LVHEEAEVPT ALEKIHRLSS MLGVPAQETA PAKLIVYLQR ENSBTAP00000009334/1-219 FGYAVGEVEA LVHKEAEVPA ALEKIHHLSS LLGVLEQGRA PAKLIVYLQR ENSTTRP00000010107/1-229 FGYAVGEVEA LVQEEAEVPA ALEKINSLSS MLGVLAQETA PAKLIVYLQR bmy_13909T0/1-219 FGYAVGEVEA LVQEEAEVPA ALEKIHSLSS MLGVLAQETA PAKLIVYLQR BACU008658/1-219 FGYAVGEVEA LVQEEAEVPA ALEKIHSLSS MLGVLAQETA PAKLIVYLQR 201 250 ENSP00000288014/1-230 FRPQDYQRLL EVNSSRERPQ ETEDPDHCLG ENSBTAP00000009334/1-219 FRPQDYQRLL EVYGSKEKP- ---------- ENSTTRP00000010107/1-229 FRPQDYQRLL EVYSSTEKP- GTEDPDVTLG bmy_13909T0/1-219 FRPQDYQRLL EGYSSKEKP- ---------- BACU008658/1-219 FRPQDYQRLL EVYSSKEKP- ----------