KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:59 2014 Check: 00 .. Name: ENSTTRP00000006355/1-1236 Len: 1267 Check: 9086 Weight: 1.00 Name: ENSP00000291574/1-1259 Len: 1267 Check: 9715 Weight: 1.00 Name: ENSBTAP00000009338/1-1260 Len: 1267 Check: 3004 Weight: 1.00 Name: bmy_21205T0/1-1221 Len: 1267 Check: 9187 Weight: 1.00 Name: BACU004370/1-1202 Len: 1267 Check: 5066 Weight: 1.00 // 1 50 ENSTTRP00000006355/1-1236 ---------- ---------- ----AGDQNL FTSIYPTLSQ QLPREPMEWR ENSP00000291574/1-1259 -MDASEEPLP PVIYTMENKP IVTCAGDQNL FTSVYPTLSQ QLPREPMEWR ENSBTAP00000009338/1-1260 MRTSESRPLP PPLTLRENLS PQGGAGDQNL FTSIYPTLSQ QLPREPMEWR bmy_21205T0/1-1221 ---------- ---------- ---------- ---------- ------MEWR BACU004370/1-1202 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006355/1-1236 RSYGRAPKMI HLESNFVQFK EELLPKEGNK ALLTFPFLHI YWTECCDTEV ENSP00000291574/1-1259 RSYGRAPKMI HLESNFVQFK EELLPKEGNK ALLTFPFLHI YWTECCDTEV ENSBTAP00000009338/1-1260 RSYGRAPKMI HLESNFVQFK EELLPKEGNK ALLTFPFLHI YWTECCDTEV bmy_21205T0/1-1221 RSYGRAPKMI HLESNFVQFK EELLPKEGNK ALLTFPFLHI YWTECCDTEV BACU004370/1-1202 --------MI HLESNFVQFK EELLPKEGNK ALLTFPFLHI YWTECCDTEV 101 150 ENSTTRP00000006355/1-1236 YKATVKDDLT KWQNVLKAHS SVDWLIVVVE NDAKKRNKTN ILPRTSIVDK ENSP00000291574/1-1259 YKATVKDDLT KWQNVLKAHS SVDWLIVIVE NDAKKKNKTN ILPRTSIVDK ENSBTAP00000009338/1-1260 YKATVKDDLT KWQNVLKAYS SVDWLIVVVE NDAKKKNKTN ILPRASIVDK bmy_21205T0/1-1221 YKATVKDDLT KWQNVLKAHS SVDWLIVVVE NDAKKKNKTN ILPRTSIVDK BACU004370/1-1202 YKATVKDDLT KWQNVLKAHS SVDWLIVVVE NDAKKKNKTN ILPRTSIVDK 151 200 ENSTTRP00000006355/1-1236 IRNDFCNKQS DRCVVLSDPL KDSSRTQESW NAFLTKLRTL LLMSFTKNLG ENSP00000291574/1-1259 IRNDFCNKQS DRCVVLSDPL KDSSRTQESW NAFLTKLRTL LLMSFTKNLG ENSBTAP00000009338/1-1260 IRNDFCNKQS DRCVVLSDPL KDSSRTQESW NAFLTKLRTL LLMSFTKNLG bmy_21205T0/1-1221 IRNDFCNKQS DRCVVLSDPL KDSSRTQESW NAFLTKLRTL LLMSFTKNLG BACU004370/1-1202 IRNDFCNKQS DRCVVLSDPL KDSSRTQESW NAFLTKLRTL LLMSFTKNLG 201 250 ENSTTRP00000006355/1-1236 KFEDDMRTLR EKRTEPGWSF CDYFMVQEEL AFVFEMLQQF EDALVQYDEL ENSP00000291574/1-1259 KFEDDMRTLR EKRTEPGWSF CEYFMVQEEL AFVFEMLQQF EDALVQYDEL ENSBTAP00000009338/1-1260 KFEDDMRTLR EKRTEPGWSF CEYFMVQEEL AFVFEMLQQF EDALVQYDEL bmy_21205T0/1-1221 KFEDDMRTLR EKRTEPGWSF CDYFMVQEEL AFVFEMLQQF EDALVQYDEL BACU004370/1-1202 KFEDDMRTLR EKRTEPGWSF CDYFMVQEEL AFVFEMLQQF EDALVQYDEL 251 300 ENSTTRP00000006355/1-1236 DALFSQYVVN FGAGDGANWL TFFCQPVKSW NGLILRKPID MEKRGLIQRQ ENSP00000291574/1-1259 DALFSQYVVN FGAGDGANWL TFFCQPVKSW NGLILRKPID MEKRESIQRR ENSBTAP00000009338/1-1260 DALFSQYVVN FGAGDGANWL TFFCQPVKSW NGLILRKPID MEKRELIQRQ bmy_21205T0/1-1221 DALFSQYVVN FGAGDGANWL TFFCQPVKSW NGLILRKPID MEKRGLIQRQ BACU004370/1-1202 DALFSQYVVN FGAGDGANWL TFFCQPVKSW NGLILRKPID MEKRGLIQRQ 301 350 ENSTTRP00000006355/1-1236 EATLLDLRSY LFSRQCTLLL FLQRPWEVAQ RALELLHSCV QELKLLEVSV ENSP00000291574/1-1259 EATLLDLRSY LFSRQCTLLL FLQRPWEVAQ RALELLHNCV QELKLLEVSV ENSBTAP00000009338/1-1260 EATLLDLRSY LFSRQCTLLL FLQRPWEVAQ RALELLHSCV QELKLLEVSV bmy_21205T0/1-1221 EATLLDLRSY LFSRQCTLLL FLQRPWEVAQ RALELLHSCV QELKLLEVSV BACU004370/1-1202 EATLLDLRSY LFSRQCTLLL FLQRPWEVAQ RALELLHSCV QELKLLEVSV 351 400 ENSTTRP00000006355/1-1236 PPGALDCWVF LSCLEVLQRI EGCCDRAQID SNIAHTVGLW SYATEKLKSL ENSP00000291574/1-1259 PPGALDCWVF LSCLEVLQRI EGCCDRAQID SNIAHTVGLW SYATEKLKSL ENSBTAP00000009338/1-1260 PPGALDCWVF LSCLEVLQRI EGCCDRAQID SNIAHTVGLW SYATEKLKSL bmy_21205T0/1-1221 PPGALDCWVF LSCLEVLQRI EGCCDRAQID SNIAHTVGLW SYATEKLKSL BACU004370/1-1202 PPGALDCWVF LSCLEVLQRI EGCCDRAQID SNIAHTVGLW SYATEKLKSL 401 450 ENSTTRP00000006355/1-1236 GYLCGLVSEQ GPNSEDLNRT VDLLAGLGAE RPETXXXXXX XXXXXXXXXX ENSP00000291574/1-1259 GYLCGLVSEK GPNSEDLNRT VDLLAGLGAE RPETANTAQS PYKKLKEALS ENSBTAP00000009338/1-1260 GYLCGLVSEK GPNSEDLNRT VDLLAGLGAE RPETANTAQS PYKKLKEALS bmy_21205T0/1-1221 GYLCGLVSEQ GPNSEDLNRT VDLLAGLGAE RPETANTAQS PYKKLKEALS BACU004370/1-1202 GYLCGLVSEQ GPNSEDLNRT VDLLAGLGAE RPETANAAQS PYKKLKEALS 451 500 ENSTTRP00000006355/1-1236 XXXXXXXXXX DLSHATIEMY TSIGRIRSAK FVGKDLAEFY M-------RK ENSP00000291574/1-1259 SVEAFEKHYL DLSHATIEMY TSIGRIRSAK FVGKDLAEFY M-------RK ENSBTAP00000009338/1-1260 SVEAFEKHYL DLSHATIEMF TSIGRIRSAK LVGKDLAEFY M-------RK bmy_21205T0/1-1221 SVEAFEKHYL DLSHATIEMY TSIGRIRSAK FVGKDLAEFY IHLTCSKRRK BACU004370/1-1202 SVEAFEKHYL DLSHATIEMY TSIGRIRSAK FVGKDLAEFY M-------RK 501 550 ENSTTRP00000006355/1-1236 KSPQKAEIYL QGALKNYLAE GWALPITHTR KQLAECQKHL GQIENYLQTS ENSP00000291574/1-1259 KAPQKAEIYL QGALKNYLAE GWALPITHTR KQLAECQKHL GQIENYLQTS ENSBTAP00000009338/1-1260 KSPQKAEMYL QGALKNYLAE GWALPITHTR KQLAECQKRL GQIENYLQTS bmy_21205T0/1-1221 KSPQKAEIYL QGALKNYLAE GWALPITHTR KQLAECQKHL GQIENYLQTS BACU004370/1-1202 KSPQKAEIYL QGALKNYLAE GWALPITHTR KQLAECQKHL GQIENYLQTS 551 600 ENSTTRP00000006355/1-1236 SLLASDRHLT GNEREYFCRE ILSFASQQAD SPGHKIVLPM HPFAQLRDLH ENSP00000291574/1-1259 SLLASDHHLT EEERKHFCQE ILDFASQPSD SPGHKIVLPM HSFAQLRDLH ENSBTAP00000009338/1-1260 SLLASDQHLT TDEREYFCRE ILSFASQQTD SPGHRVALPM HSFAQLRDLR bmy_21205T0/1-1221 SLLASERHLT ESEREYFCRE ILSFAKRQAD SPGHKIVLPM HSFAQLRDLH BACU004370/1-1202 SLLASDRHLT ESEREHFCRE ILSFASRQAD SPGHKIVLPM HSFAQLRDLH 601 650 ENSTTRP00000006355/1-1236 FTPSNAVVHV GGVLSVEITV CSQMPVPVHA EQIAINVHFS IEKNNYRKTA ENSP00000291574/1-1259 FDPSNAVVHV GGVLCVEITM YSQMPVPVHV EQIVVNVHFS IEKNSYRKTA ENSBTAP00000009338/1-1260 FTPANAVVHV GGVLSVEITV CSQMPVPIHV EQIAIHVHFS IEKNSYRKTA bmy_21205T0/1-1221 FTPSNAVVHV GGVLSVEITV CSQMPVPVHV EQIAINVHFS IEKNNYRKTA BACU004370/1-1202 FTPSNAVVHV GGALSVEITV CSQMPVPVHV EQIAINVHFS IEKNNYRKTA 651 700 ENSTTRP00000006355/1-1236 EWLTKHKTAN GIVSFPAETS PFPTSQNSLP ALELCEMFER SPSDNSLHTT ENSP00000291574/1-1259 EWLTKHKTSN GIINFPPETA PFPVSQNSLP ALELYEMFER SPSDNSLNTT ENSBTAP00000009338/1-1260 EWLTKHKTAN GVVNFPAEAS PFPTSQSSLP ALELYEMFER SPSDNSLNTT bmy_21205T0/1-1221 EWLTKHKTAN GIVSFPAETA PFPTSQNSLP ALELCEMFER SPSDNSLHTT BACU004370/1-1202 EWLTKHKTAN GIVSFPAETA PYPTSQNSLP TLELCEMFER SPSDNSLHTT 701 750 ENSTTRP00000006355/1-1236 GIICKNVHVL LRKQESGASL EAPSGAALES GAHVLKCTAV TLEPGPNAIT ENSP00000291574/1-1259 GIICRNVHML LRRQESSSSL EMPSGVALEE GAHVLRCSHV TLEPGANQIT ENSBTAP00000009338/1-1260 GIICKNVHML LRRQESSTSL EASSGLALED GAHVLRCAGV TLQPGPNTIV bmy_21205T0/1-1221 GIICKNVHML LRKQESGASL EAPSGAALEA GAHVLKCTAV TLEPGPNTIT BACU004370/1-1202 GIICKNVHML LRKQESGAAL EAPSGAALEA GAHVLKCNAV TLEPGPNTIT 751 800 ENSTTRP00000006355/1-1236 FRTQAKEPGT YTLRQLCASV GPVWFVLPHI YPLVQYDVYS QEPQLHVEPL ENSP00000291574/1-1259 FRTQAKEPGT YTLRQLCASV GSVWFVLPHI YPIVQYDVYS QEPQLHVEPL ENSBTAP00000009338/1-1260 FRTQAREPGT YTLRQLCASL GPVWFVLPHI YPLVQYDVYS QEPQLLVEPL bmy_21205T0/1-1221 FRTQAREPGT YTLRQLCASV GPVWFVLPHI YPLVQYEVYS QEPQLHVEPL BACU004370/1-1202 FRTQAKEPGT YTLRQLCASV GPVWFVLPHM YPLVRYEVYS QEPQLHVEPL 801 850 ENSTTRP00000006355/1-1236 ADSLLAGIPQ KVKFTVTTGH YTVKNGDSLQ LSNVEAMLIL GHEENRAVIY ENSP00000291574/1-1259 ADSLLAGIPQ RVKFTVTTGH YTIKNGDSLQ LSNAEAMLIL CQAESRAVVY ENSBTAP00000009338/1-1260 ADSLLAGIPQ KVKFTVTTGH YTVKNGDSLQ LSNVDAMLIL CPEENRAVIY bmy_21205T0/1-1221 ADSLLAGIPQ KVKFTVTTGH YTVKHGDSLQ LSNVEAMLIL CHEESRAVIY BACU004370/1-1202 ADSLLAGIPQ KVKFTVTTGH YTVKHGDSLQ LSNVEAMLIL CHEESRAVIY 851 900 ENSTTRP00000006355/1-1236 SNMREKASXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000291574/1-1259 SNTREQSSEA ALRIQSSDKV TSISLPVAPA YHVIEFELEV LSLPSAPALG ENSBTAP00000009338/1-1260 SNTREKVSDA LLRVQSSDKV TSISLPAAPT YHLIEFELEV LSLPSAPAAG bmy_21205T0/1-1221 SNMREKASDA PLRVQSSDKV TSISLPAAPA YHMIEFELEV LSLPSAPATG BACU004370/1-1202 SNMREKASDA PLRVQSSDKV TSISLPAAPA YHVIEFELEV LSLPSAPATG 901 950 ENSTTRP00000006355/1-1236 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XVSIDCPWSI YSTVISLTFS ENSP00000291574/1-1259 GESDMLGMAE PHRKHKDKQR TGRCMVTTDH KVSIDCPWSI YSTVIALTFS ENSBTAP00000009338/1-1260 GESTLLGVTE PHGKHKDTQK TGHCMATTDH KVSIDCPWSI YSTVIALTFS bmy_21205T0/1-1221 GESTMLGMTE PHGKHKDTHK AGHCMATMDH KVSIDCPWSI YSTVIALTFS BACU004370/1-1202 GESTMLGMTE PHGKHKDTHK AGPCMATMDH KVSIDCPWSI YSTVIALTFS 951 1000 ENSTTRP00000006355/1-1236 MPFRTTHSLL SSGTRKYVQV CVQNLSELDF QLSDSHLVDT GDSTDLRLVP ENSP00000291574/1-1259 VPFRTTHSLL SSGTRKYVQV CVQNLSELDF QLSDSYLVDT GDSTDLQLVP ENSBTAP00000009338/1-1260 VPFRTTHSLL SSGTRKYVQV CVQNLSELDF QLSDSRLVDT HDSTDLRLIP bmy_21205T0/1-1221 MPFGTTHSLL SSGTRKYVQV CVQNLSELDF QLSDSHLVDT GDSTDLRLIP BACU004370/1-1202 MPFGTTHSLL SSGTRKYVQV CVQNLSELDF QLSDSHLVDT GDSTDLRLIP 1001 1050 ENSTTRP00000006355/1-1236 LNTESEQRIH SRQAVFFVWE LKWTQEPPPS LHCRFSVGFS PASEERLSVS ENSP00000291574/1-1259 LNTQSQQPIY SKQSVFFVWE LKWTEEPPPS LHCRFSVGFS PASEEQLSIS ENSBTAP00000009338/1-1260 LNTESEQCIH SRQAVFFVWE LKWTQEPPPS LHCRFSTGFS PASEEQLSVS bmy_21205T0/1-1221 LNTESEQRIH SKQAVFFVWE LKWTQEPPPS LHCRFSVGFS PASEERLSVS BACU004370/1-1202 LNTESEQRIH SKQAVFFVWE LKWTQEPPPS LHCRFSVGFS PASEERLSVS 1051 1100 ENSTTRP00000006355/1-1236 LKPYTYEFQV DNFLTLYSVR AEISPPPGTE LCKTGSLCSL EVSITRLSDL ENSP00000291574/1-1259 LKPYTYEFKV ENFFTLYNVK AEIFPPSGME YCRTGSLCSL EVLITRLSDL ENSBTAP00000009338/1-1260 LKPYTYEFQV ENFFTLYNVR AEISPPPGTE HCRTGSLCSL DVSITRLSDL bmy_21205T0/1-1221 LKPYTYEFQV DNFLTLYSVR AEISPPPGTE LCKTGSLCSL EVSITRLSDL BACU004370/1-1202 LKPYTYEFQV DNFLTLYSVR AEISPPPGAE LCRTGSLCCL EVSVTRLSGL 1101 1150 ENSTTRP00000006355/1-1236 SDADKDEALT EREDYFSTKL MYEVVDNSSN WAVCGKSSGV ISMPVAARAT ENSP00000291574/1-1259 LEVDKDEALT ESDEHFSTKL MYEVVDNSSN WAVCGKSCGV ISMPVAARAT ENSBTAP00000009338/1-1260 LEVDKDEALT ESDEYFSTKL MYEVVDNSSN WAVCGKSSGV ISMPVTAQAT bmy_21205T0/1-1221 SEADKDEALT ECAEYFSTKL MYEVVDNSSN WAVCGKSSGV ISMPVAARAT BACU004370/1-1202 SEADKDEALT ERAEYFSTKL MYEVVDNSSN WAVCGKSSGV ISMPVAARAT 1151 1200 ENSTTRP00000006355/1-1236 HRVRMEVMPL FAGYLPLPDV RLFKYLPHHS AHSSQLDADS WIENDSLSVD ENSP00000291574/1-1259 HRVHMEVMPL FAGYLPLPDV RLFKYLPHHS AHSSQLDADS WIENDSLSVD ENSBTAP00000009338/1-1260 HRVHMEVMPL FAGYLPLPDV RLFKYLPHHS AQSSQLDADS WIENDSLSVD bmy_21205T0/1-1221 HRVHMEVMPL FAGYLPLPDV RLFKYLPHHS AHSSQLDADS WIENDSLSVD BACU004370/1-1202 HRVHMEVMPL FAGYLPLPDV RLFKYLPHHS AHSSQLDADS WIENDSLSVD 1201 1250 ENSTTRP00000006355/1-1236 KHVDDQLDSG SVQSRGSTRS VASSEHKGLP MPRLRALPPG QAFNASAGTQ ENSP00000291574/1-1259 KHGDDQPDSS SLKSRGSVHS ACSSEHKGLP MPRLQALPAG QVFNSSSGTQ ENSBTAP00000009338/1-1260 KHVDDQLDSG SVKSRGSVHS AASSEHKGLP MPRLRALPPG QAFNSSAGTQ bmy_21205T0/1-1221 KPVDDQLDSG SVQSRGSTRS AASSEHKGLP MPRLRALPPG QAFSASAGTQ BACU004370/1-1202 KHVDDQLDSG SVQSRGSMRS VASSEHKGLP MPRLRALPSG QAFNASAGTQ 1251 1300 ENSTTRP00000006355/1-1236 VLVIPSQDDH VLEVSVT ENSP00000291574/1-1259 VLVIPSQDDH VLEVSVT ENSBTAP00000009338/1-1260 VLVIPSKDDH VLEVSVT bmy_21205T0/1-1221 VLVVPSRDDH VLEVSVT BACU004370/1-1202 VLVIPSQDDH VLEVSVT