KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:00 2014 Check: 00 .. Name: ENSP00000334145/1-295 Len: 346 Check: 3294 Weight: 1.00 Name: ENSBTAP00000009341/1-292 Len: 346 Check: 1581 Weight: 1.00 Name: ENSTTRP00000007645/1-291 Len: 346 Check: 1423 Weight: 1.00 Name: bmy_05394T0/1-200 Len: 346 Check: 7156 Weight: 1.00 Name: BACU002796/1-292 Len: 346 Check: 4698 Weight: 1.00 // 1 50 ENSP00000334145/1-295 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009341/1-292 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007645/1-291 ---------- ---------- ---------- ---------- ---------- bmy_05394T0/1-200 RARASTDSGF LAPLLLHPAA PGASSPTSAA SPPPQPPGRK ESPRPRRQLV BACU002796/1-292 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000334145/1-295 -METPAWPRV PRPETAVART LLLGWVFAQV AGASGTTNTV AAYNLTWKST ENSBTAP00000009341/1-292 -MATPNGPRV PCPQAAVARA LLFGLVLIQG AGVAGTTDVV VAYNITWKST ENSTTRP00000007645/1-291 -MATPTGPRV PC-EAVDPRA LLFGWILVRV AGATGTTDVV VAYNLTWKST bmy_05394T0/1-200 NMATPTGPRV PCSEAAVARA LLFGWVLVRV AGATGTTDVV VAYNLTWKST BACU002796/1-292 -MATPTGPRV PCSEAAVARA LLFGWVLVRV AGATGTTDVV VAYNLTWKST 101 150 ENSP00000334145/1-295 NFKTILEWEP KPVNQVYTVQ ISTKSGDWKS KCFYTTDTEC DLTDEIVKDV ENSBTAP00000009341/1-292 NFKTILEWEP KPINHVYTVQ ISPRLGNWKN KCFYTTNTEC DVTDEIVKNV ENSTTRP00000007645/1-291 NFKTILEWEP KPINHVYTVQ ISSRLGNWKN KCFYTTDTEC DVTDEIVKNV bmy_05394T0/1-200 NFKTILEWEP KPINHVYTVQ ISPRLGNWKN KCFYTTDTEC DVTDEIMKNV BACU002796/1-292 NFKTILEWEP KPINHVYTVQ ISPRLGNWKN KCFYTTDTEC DVTDEIVKNV 151 200 ENSP00000334145/1-295 KQTYLARVFS YPAGNVESTG SAGEPLYENS PEFTPYLETN LGQPTIQSFE ENSBTAP00000009341/1-292 RETYLARVLS YPADTSSST- --VEPPFTNS PEFTPYLETN LGQPTIQSFE ENSTTRP00000007645/1-291 KETYLARVFS YPLDAIDST- --GEPPFTNS PEFTPYLETN LGQPTIRSFE bmy_05394T0/1-200 KETYLARVFS YPLDAISST- --GEPPFTNS PEFTPYLESN LGKKT----- BACU002796/1-292 KETYLVRVFS YPLDAIIST- --GEPPFTNS PEFTPYLETN LGQPTIRSFE 201 250 ENSP00000334145/1-295 QVGTKVNVTV EDERTLVRRN NTFLSLRDVF GKDLIYTLYY WKSSSSGKKT ENSBTAP00000009341/1-292 QVGTKLNVTV QDARTLVRAN SAFLSLRDVF GKDLNYTLYY WKASSTGKKK ENSTTRP00000007645/1-291 QAGTELNVTV QDARTLVRVS GTFLSLRDVF GKDLNYILYY WRASSTGKKK bmy_05394T0/1-200 ---------- ----SLALIG GT-------- ---------- ---------- BACU002796/1-292 QVGTKLNVTI QDARTLVRVS GTFLSLRDVF GKDLNYILYY WRASSTGKKK 251 300 ENSP00000334145/1-295 AKTNTNEFLI DVDKGENYCF SVQAVIPSRT VNRKSTDSPV ECMGQEKGEF ENSBTAP00000009341/1-292 ATTNTNGFLI DVDKGENYCF HVQAVILSRR VNQKSPESPI KCTSHEKVLS ENSTTRP00000007645/1-291 ATTNTNEFLI DVDEGENYCF NVQAVIPSRR ANQKSPESPI KCTSQEKVLS bmy_05394T0/1-200 ---------- ---------- ---------- ---------- ---------- BACU002796/1-292 ATTNTNEFLI DVDEGENYCF NVQAVIPSRR ANQKSPESPI ECTSQEKVLS 301 350 ENSP00000334145/1-295 REIFYIIGAV VFVVIILVII LAISLHKCRK AGVGQSWKEN SPLNVS ENSBTAP00000009341/1-292 TELFFIIGTV MLVIIIFIVV LSVSLHKCRK VRAERSGKEN TPLNAA ENSTTRP00000007645/1-291 TEMPFIVVAV MLVVIIFIIV LSVSLYKCRK ARAERSGKES LPLNVA bmy_05394T0/1-200 ---------- ---------- ---------- ---------- ------ BACU002796/1-292 TEMFFIIVAV MLVVIIFIIV LSVSLSKVEA WYDTLDTLDM QCVARG