KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:01 2014 Check: 00 .. Name: ENSTTRP00000006369/1-268 Len: 457 Check: 7919 Weight: 1.00 Name: BACU004368/1-321 Len: 457 Check: 3723 Weight: 1.00 Name: bmy_21207T0/1-390 Len: 457 Check: 3132 Weight: 1.00 Name: ENSP00000291577/1-268 Len: 457 Check: 2717 Weight: 1.00 Name: ENSBTAP00000009346/1-274 Len: 457 Check: 3103 Weight: 1.00 // 1 50 ENSTTRP00000006369/1-268 ---------- ---------- ---------- ---------- ---------- BACU004368/1-321 ---------- ---------- ---------- ---------- ---------- bmy_21207T0/1-390 MDTRTASSYP VAEPGGVCVA ATPAGACGQV PHTTQRKANN INRPAGDTAL ENSP00000291577/1-268 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009346/1-274 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006369/1-268 ---------- ---------- ---------- ---------- ---------- BACU004368/1-321 ---------- ---------- ---------- ---------- ---------- bmy_21207T0/1-390 SPYLSAALLG NRDPARHPAT PPRGGTETVS EAALTHCRAT RPCRAEREPR ENSP00000291577/1-268 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009346/1-274 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006369/1-268 ---------- --MAALRALV ASRLAVTAAF A--------- -----PLPFG BACU004368/1-321 ---------- --MEFYKGLS PQ-------- ---------- -----SAPPP bmy_21207T0/1-390 ATAQVRPRPP ARSRAGRRLC AGAVPLTVTL RPRCPRGGWR PSGLWSAPPP ENSP00000291577/1-268 ---------- --MAAVRVLV ASRLAAASAF T--------- -----SLSPG ENSBTAP00000009346/1-274 ---------- --MAAFRALA AARLAVTPGF APR------- -PGLWPLPFG 151 200 ENSTTRP00000006369/1-268 GAAQSPRAAF HASAPRPVAR VAVVLSGCGV YDGTELHEAS SILVHLSRAG BACU004368/1-321 RWRRSARTVD RVT-PVTGPP FPQVLSGCGV YDGTELHEAS SILVHLSRAG bmy_21207T0/1-390 RWRRSARTVD RVT-PVTGPP SPQVLSGCGV YDGTELHEAS SILVHLSRAG ENSP00000291577/1-268 GRTPSQRAAL HLSVPRPAAR VALVLSGCGV YDGTEIHEAS AILVHLSRGG ENSBTAP00000009346/1-274 GPAPSSRAAF HASAPRPGPR VAVVLSGCGV YDGTELHEAS SILVHLSRGG 201 250 ENSTTRP00000006369/1-268 AEVQIFAPDI PQMHVIDHTK GQPSEGETRN VLTESARIAR GKITDLAKLS BACU004368/1-321 AEVQIFAPDI PQMHVIDHTK GQPSEGKTRN VLTESARIAR GKITDLAKLS bmy_21207T0/1-390 AEVQIFAPDI PQMHVIDHTK GQPSEGETRN VLTESARIAR GKITDLAKLS ENSP00000291577/1-268 AEVQIFAPDV PQMHVIDHTK GQPSEGESRN VLTESARIAR GKITDLANLS ENSBTAP00000009346/1-274 AEVQIFAPDV PQMHVIDHIK GQPSEGETRN VLTESARIAR GKITDLAKLT 251 300 ENSTTRP00000006369/1-268 AANHDAAVFP GGFGAAKNL- ---------- ---------- ---------- BACU004368/1-321 AADHDAAVFP GGFGAAKNLH SLALALLAQH IPSDTARGCC SRDGGGSRAA bmy_21207T0/1-390 AANHDAAVFP GGFGAAKNL- ---------- ---------- ---------- ENSP00000291577/1-268 AANHDAAIFP GGFGAAKNL- ---------- ---------- ---------- ENSBTAP00000009346/1-274 AVNHDAAIFP GGFGAAKNL- ---------- ---------- ---------- 301 350 ENSTTRP00000006369/1-268 ---------- ---------- ---------X XXXXXXXXXX XXXXXXXXXX BACU004368/1-321 GKHPAAAPCG FGALNTVQRA SQPGLHAFWS TFAVDGGDCK VNKDVERVLK bmy_21207T0/1-390 ---------- ---------- ---------S TFAVDGGDCK VNKDVERVLK ENSP00000291577/1-268 ---------- ---------- ---------S TFAVDGKDCK VNKEVERVLK ENSBTAP00000009346/1-274 ---------- ---------- ---------S TFAVDGGTCK VNRDVERVLK 351 400 ENSTTRP00000006369/1-268 XXXXXXXXXX LCCIAPVLAA KVLRSVEVTV GHEQEEGGRW PHAGTAQVIK BACU004368/1-321 EFHQAGKPIG LCCIAPVLAA KVLRSVEVTV GHEQEEGGKW PYAGTAQVIK bmy_21207T0/1-390 EFHQAGKPIG LCCIAPVLAA KVLRSVEVTV GHEQEEGGKW PHAGTAQVIK ENSP00000291577/1-268 EFHQAGKPIG LCCIAPVLAA KVLRGVEVTV GHEQEEGGKW PYAGTAEAIK ENSBTAP00000009346/1-274 EFHQAGKPIG LCCIAPVLAA KVLRGVEVTV GHEQEEGGKW PHAGTAEVIK 401 450 ENSTTRP00000006369/1-268 ALGAKHCVTG VT---EAHVD RKNKVVTTPA FMCDTAFHHI HDGLGAMVSK BACU004368/1-321 ALGAKHCCSS ITCVHEAHVD QKNKVVTTPA FMCDTAFHHV HDGLGAMVRK bmy_21207T0/1-390 ALGAKHCVTG ------AHVD QRNKVVTTPA FMCDAAFHHV HDGLGAMVRK ENSP00000291577/1-268 ALGAKHCVKE VV---EAHVD QKNKVVTTPA FMCETALHYI HDGIGAMVRK ENSBTAP00000009346/1-274 ALGAKHCVMG VT---EAHVD QKNKVVTTPA FMCDTALHHI HDGIGAMVRK 451 500 ENSTTRP00000006369/1-268 VLELASK BACU004368/1-321 VLELTST bmy_21207T0/1-390 VLELASK ENSP00000291577/1-268 VLELTGK ENSBTAP00000009346/1-274 VLELAGR