KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:03 2014 Check: 00 .. Name: ENSP00000339374/1-337 Len: 347 Check: 5064 Weight: 1.00 Name: ENSBTAP00000009351/1-316 Len: 347 Check: 2025 Weight: 1.00 Name: ENSTTRP00000011112/1-312 Len: 347 Check: 1101 Weight: 1.00 Name: bmy_10846T0/1-306 Len: 347 Check: 8789 Weight: 1.00 Name: BACU005350/1-305 Len: 347 Check: 47 Weight: 1.00 // 1 50 ENSP00000339374/1-337 -----MSQPS GGRAPGTRIY SWS-----CP TVMSPGEKLD PIPDSFILQP ENSBTAP00000009351/1-316 ---------- ---------- ---------- TPMAPGEKLD PLPDTFILQP ENSTTRP00000011112/1-312 ---------- ---------- ---------- ---SPGE-LD PLPDTFILQP bmy_10846T0/1-306 IWLGKVSQSS GGRAPGIRIC SPSWRRPPPR TTMSPGEKLD PLPDTFILQP BACU005350/1-305 ---------- ---------- ---------- --MSPGEKLD PLPDTFILQP 51 100 ENSP00000339374/1-337 PVFHPVVPYV TTIFGGLHAG KMVMLQGVVP LDAHSRFQVD FQCGCSLCPR ENSBTAP00000009351/1-316 PVFQPVIPFV TTIFGGLRAG KMVMLQGAVP LNAH-RFQVD FQCGCSLHPR ENSTTRP00000011112/1-312 PVFHPVVPYV ATIFGGLRAG KMVVLQGAVP LNAR-RFQVD FQCGCSLHPR bmy_10846T0/1-306 PVFHPVVPYV TTIFGGLRAR KMVMLQGAVP LNAR-RFQVD FQCGCSLHPR BACU005350/1-305 PVFHPVVPYV TTIFGGLRAG KMVMLQGAVP VNAR-RFQVD FQCGCSLHPR 101 150 ENSP00000339374/1-337 PDIAFHFNPR FHTTKPHVIC NTLHGGRWQR EARWPHLALR RGSSFLILFL ENSBTAP00000009351/1-316 PDIAIHFNPR FHTTKPHVIC NSLYRGRWQV EARWPHVALQ RGASFLILFL ENSTTRP00000011112/1-312 PDIAIHFNPR FHTTKPHVIC NTLRGGRWQA EARWPHLALR KGASFLILFL bmy_10846T0/1-306 PDIAIHFNPR FHTTKPHVIC NTLHGGRWQA EARWPHLALQ RGASFLILFL BACU005350/1-305 PDIAIHFNPR FHTTKPHVIC NTLHGGRWQA EARWPHLALQ RGASFLILFL 151 200 ENSP00000339374/1-337 FGNEEVKVSV NGQHFLHFRY RLPLSHVDTL GIFGDILVEA VGFLNINPFV ENSBTAP00000009351/1-316 FGNEEMKVSV NGQHFLHYRY RLPLSRVDTL GIFGDISVTA VGFLNINPFV ENSTTRP00000011112/1-312 FGNEEMKVSV NVQHFLHYRY QLPLSRVDTL GIYGGILVTA VGFLNISPFV bmy_10846T0/1-306 FGNEDMK--- ---------- ---------- ---------- -------PFV BACU005350/1-305 FGNEEMKVSV NGQHFLHYRY RLPLSRVDTL GIYGDILVTA VGFLNISPFV 201 250 ENSP00000339374/1-337 EGSREYPAGH PFLLMSPRLE VPCSHALPQG LSPGQVIIVR GLVLQEPKHF ENSBTAP00000009351/1-316 EGGSEYPVGH PFLLRSPGLE VPCFHALPRG LWPGQVIIVR GLVLPEPKDF ENSTTRP00000011112/1-312 EGGSEYPVGH PFLLKSPSLE VPCLRALPQG LWPGQVIIVR GLVLPEPKDF bmy_10846T0/1-306 EGGSEYPVGH PFLLKSPSLE VPCSRALPQG LWPGQVIIVR GLVLPEPKDF BACU005350/1-305 EGGSEYPVGH ---------E VPCSRALPQG LWPGQVIIVR GLVLPEPKDF 251 300 ENSP00000339374/1-337 TVSLRDQAAH APVTLRASFA DRTLAWISRW GQKKLISAPF LFYPQRFFEV ENSBTAP00000009351/1-316 TLSLRDEAAH VPVTLRASFA DRTLAWVSRW GRKKLILAPF LFYPQRFFEV ENSTTRP00000011112/1-312 TLSLLDDAAH VPVTLRASFA DRTLAWVSRW GRKKLILAPF LFYPQRFFEV bmy_10846T0/1-306 TLSLLDKAAH VPVTLRASFA DRTLAWVSCW GRKKLILAPF LFYPQRFFEV BACU005350/1-305 TLSLLDEAAH VPVTLRASFA DRTLAWVSRW GRKKLILAPF LFYPQRFFEV 301 350 ENSP00000339374/1-337 LLLFQEGGLK LALNGQGLGA TSMNQQALEQ LRELRISGSV QLYCVHS ENSBTAP00000009351/1-316 LLLCQEGGLK LALNGQGVGA TSLGQQVLEQ LRELRISGSV QLYCVHY ENSTTRP00000011112/1-312 LLLCQEGELK LALSGQGVGA TSLGQQALER LRELRISGSV QLYCVHY bmy_10846T0/1-306 LLLCQEGELK LALSGQGVGA TSLGQQALER LRELRISGSV QLYCVHY BACU005350/1-305 LLLCQEGELK LALSGQGVGA TSLGQQALER LRELRISGSV QLYCVHY