KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:03 2014 Check: 00 .. Name: ENSP00000376822/1-498 Len: 582 Check: 1305 Weight: 1.00 Name: ENSBTAP00000009356/1-488 Len: 582 Check: 7151 Weight: 1.00 Name: ENSTTRP00000002295/1-582 Len: 582 Check: 924 Weight: 1.00 Name: bmy_08556T0/1-391 Len: 582 Check: 1955 Weight: 1.00 Name: BACU002642/1-577 Len: 582 Check: 1989 Weight: 1.00 // 1 50 ENSP00000376822/1-498 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009356/1-488 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002295/1-582 GFLPKQEARQ SHSPAVHSET EHQSLPIHSL QPGTGVQVEG AGSLPVAGPT bmy_08556T0/1-391 ---------- ---------- ---------- ---------- ---------- BACU002642/1-577 ---MRPEKPK DGVRAENNFH INVTRAGWDA PMGPGFSHCA RGQQTSTHDS 51 100 ENSP00000376822/1-498 ---------- ---------- ---------- ----MSHQPA VATKMPEEMD ENSBTAP00000009356/1-488 ---------- ---------- ---------- ---------- ----TSGKMD ENSTTRP00000002295/1-582 PPQHPPVFKT KVRLLGSEAQ QERVQITVGL SDPSDPHISV VATRTSGEMD bmy_08556T0/1-391 ---------- ---------- ---------- ---------- --------MD BACU002642/1-577 EDDGPLVHVN EIRQY--TGK NQTLEILPHI PQTCFQAVQI SATRTSGEMD 101 150 ENSP00000376822/1-498 KPLISLHLVD SDSSLAKVPD EAPKVGILGS GDFARSLATR LVGSGFKVVV ENSBTAP00000009356/1-488 KPLISHHLVD SDGSLAEAPS EVPKVGILGS GDFARSLATR LVGSGFSVVV ENSTTRP00000002295/1-582 KPLISRHLVD SDGSLAEAPR EVPKVGILGS GDFARSLATR LVGSGFSVVV bmy_08556T0/1-391 KPLISCHLVD SDGSLAEAPS EVPKVGILGS GDFARSLATR LVGSGFSVVV BACU002642/1-577 KPLISCHLVD SDGSLAETPS EVPKVGILGS GDFARSLATR LVGSGFSVVV 151 200 ENSP00000376822/1-498 GSRNPKRTAR LFPSAAQVTF QEEAVSSPEV IFVAVFREHY SSLCSLSDQL ENSBTAP00000009356/1-488 GSRNPKRMAG LFPSAAQVTL QEEAVGSPEV IFVAMFREHY STLCGLSDQL ENSTTRP00000002295/1-582 GSRNPKRMAG LFPSAAQVTL QEEAVGSPEV IFVAMFREHY STLCGLSDQL bmy_08556T0/1-391 GSRNPKRTAG LFPSAAQVTF QEEAVGSPEV IFVAMFREHY STLCGLSDQL BACU002642/1-577 GSRNPKRTAG LFPSAAQVTF QEEAVGSPEV IFVAMFREHY STLCGLSDQL 201 250 ENSP00000376822/1-498 AGKILVDVSN PTEQEHLQHR ESNAEYLASL FPTCTVVKAF NVISAWTLQA ENSBTAP00000009356/1-488 AGKILVDVSN PTEQEHLQHH QSNAEYLASL FPTCAVVKAF NVISAWTLQS ENSTTRP00000002295/1-582 AGKILVDVSN PTQQEHLRHH ESNAEYLASL FPTCTVVKAF NVISAWTLQA bmy_08556T0/1-391 AGKILVDVSN PTEQEHLRHH ESNAEYLASL FPACTVVKAF NVISAWTLQA BACU002642/1-577 AGKILVDVSN PTEQEHLRHH ESNAEYLASL FPACAVVKAF NVISAWTLQS 251 300 ENSP00000376822/1-498 GPRDGNRQVP ICGDQPEAKR AVSEMALAMG FMPVDMGSLA SAWEVEAMPL ENSBTAP00000009356/1-488 GPRDGNRQVP ICSDQPEAKR TVLEMVRAMG FTPVDMGSLA SAREVEAMPL ENSTTRP00000002295/1-582 GPRDGNRQVP ICSDQPEAKR AVLELAQAMG FTPVDMGSLA SAREVEAMPL bmy_08556T0/1-391 GPRDGNRQVP ICSDQPEAKR AVLELAQAMG FTPVDMGSLA SAREVEAMPL BACU002642/1-577 GPRDGNRQVP ICSDQPEAKR TVLELAQAMG FTPVDMGSLA SAREVEAMPL 301 350 ENSP00000376822/1-498 RLLPAWKVPT LLALGLFVCF YAYNFVRDVL QPYVQESQNK FFKLPVSVVN ENSBTAP00000009356/1-488 RLFPGWKVPA LLALGLFIFF YAYNFVRDVL EPYVQEGKNK FYKLPVFVVN ENSTTRP00000002295/1-582 RLLPGWKVPA LLALGLFVFF YTYNFIRDVL QPYLQEGKNK FYQLPVSVVN bmy_08556T0/1-391 RLLPGWKVPA LLALGLFVFF YTYNFIRDVL QPYLQEGKNK FYQLPVSVVN BACU002642/1-577 RLLPGWKVPA LLALGLFVFF YTYNFIRDVL QPYLQEGKNK FYQLPVSVVN 351 400 ENSP00000376822/1-498 TTLPCVAYVL LSLVYLPGVL AAALQLRRGT KYQRFPDWLD HWLQHRKQIG ENSBTAP00000009356/1-488 TTLPCVAYVL LSLVYLPGVL AAALQLRRGT KYQRFPDWLD HWLQHRKQIG ENSTTRP00000002295/1-582 TTLPCVAYVL LSLVYLPGVV AAALQLRRGT KYRRFPDWLD HWLQHRKQMG bmy_08556T0/1-391 TTLPCVAYVL LSLVYLPGVV AAALQLRRGT KYRRFPDWLG HWLQHRKQIG BACU002642/1-577 TTLPCVAYVL LSLVYLPGVV AAALQLRRGT KYRRFPDWLG HWLQHRKQIG 401 450 ENSP00000376822/1-498 LLSFFCAALH ALYSFCLPLR RAHRYDLVNL AVKQVLANKS HLWVEEEVWR ENSBTAP00000009356/1-488 LLSFFCAALH ALYSLCLPLR RSHRYDLVNL AIKQVLTNKS HLWNEEEVWR ENSTTRP00000002295/1-582 LLSFFCAALH ALYSFCLPLR RSHRYELVNQ AVKQVLTNKS HLWIEEEVWR bmy_08556T0/1-391 LLSFFCAALH ALYSFCLPLR RSHRYELVNL AVKQVLTNKS HLWIEEEVWR BACU002642/1-577 LLSFFCAALH ALYSFCLPLR RSHRYELVNL AVKQVLTNKS HLWIEEEVWR 451 500 ENSP00000376822/1-498 MEIYLSLGVL ALGTLSLLAV TSLPSIANSL NWREFSFVQS SLGFVALVLS ENSBTAP00000009356/1-488 MEIYLSLGVL ALGMLSLLAV TSLPSIANSL NWREFSFVQS TLGFVALVLS ENSTTRP00000002295/1-582 MEIYLSLGVL ALGTLSLLAV TSLPSIANSL NWREFTFVQS TLGFVGLVLS bmy_08556T0/1-391 MEIYLSLGVL ALGTLSLLAV TSLPSIANSL NWREFSFVQ- ---------- BACU002642/1-577 MEIYLSLGVL ALGTLSLLAV TSLPSIANSL NWREFSFVQS TLGFVGLVLS 501 550 ENSP00000376822/1-498 TLHTLTYGWT RAFEESRYKF YLPPTFTLTL LVPCVVILAK ALFLLPCISR ENSBTAP00000009356/1-488 TLHTLTYGWT RAFEESRYKF FLPPTFTLTL LVPCVIILAK GLFLLPCISR ENSTTRP00000002295/1-582 TLHTLTYGWT RAFEESRYKF YLPPTFTLTL LVPCVVILAK GLFLLPCFSR bmy_08556T0/1-391 ---------- ---------- ---------- ---------- ---------- BACU002642/1-577 TVHTLTYGWT RAFEESRYKF YLPPTFTLTL LVPCVVILAK GLFLLPCFSR 551 600 ENSP00000376822/1-498 RLARIRRGWE RESTIKFTLP TDHALAEKTS HV ENSBTAP00000009356/1-488 RLTKIRRGWE KDGSVRFTLP VDHALAQKTS HV ENSTTRP00000002295/1-582 RLSRIRRGWE KDGAVKFTLP VDCALAQKTS HV bmy_08556T0/1-391 ---------- ---------- ---------- -- BACU002642/1-577 RLSKIRRGWE KDGAVKFTLP VDRALAQKTS HV