KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:21 2014 Check: 00 .. Name: ENSP00000202816/1-851 Len: 923 Check: 2275 Weight: 1.00 Name: ENSBTAP00000009384/1-856 Len: 923 Check: 2427 Weight: 1.00 Name: ENSTTRP00000005053/1-853 Len: 923 Check: 8956 Weight: 1.00 Name: bmy_10736T0/1-663 Len: 923 Check: 8466 Weight: 1.00 Name: BACU000654/1-858 Len: 923 Check: 3091 Weight: 1.00 // 1 50 ENSP00000202816/1-851 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009384/1-856 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005053/1-853 ---------- ---------- ---------- ---------- ---------- bmy_10736T0/1-663 MRRGFSEDSG ELRRGKAEEV WPVRVPLRLR VTLRIVGVAA HVRLGEVSEL BACU000654/1-858 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000202816/1-851 ---------- ----MSSKQE IMSDQRFRRV AKDPRFWEMP EKDRKVKIDK ENSBTAP00000009384/1-856 ---------- ----MASKQE IMSDQRFRRV AKDPRFWEMP EKDRKVKIDK ENSTTRP00000005053/1-853 ---------- ----MASKQE IMSDQRFRRV AKDPRFWEMP EKDRKIKIDK bmy_10736T0/1-663 CLXSSSICPV RHLKMASKQE IMSDQRFRRV AKDPRFWEMP EKDRKIKIDK BACU000654/1-858 ---------- ----MASKQE IMSDQRFRRV AKDPRFWEMP EKDRKIKIDK 101 150 ENSP00000202816/1-851 RFRAMFHDKK FKLNYAVDKR GRPISHSTTE DLKRFYDLSD SDSNLSGEDS ENSBTAP00000009384/1-856 RFRAMFHDKK FKLNYAVDKR GRPIKHSTTE DLKRFYDLSD SDSDLSDENN ENSTTRP00000005053/1-853 RFRAMFHDKK FKLNYAVDKR GRPINHSTTE DLKRFYDLSD SDSDLSDEDN bmy_10736T0/1-663 RFRAMFHDKK FKLNYAVDKR GRPINHSTTE DLKRFYDLSD SDSDFSDKDN BACU000654/1-858 RFRAMFHDKK FKLNYAVDKR GRPINHSTTE DLKRFYDLSD SDSDLSDEDN 151 200 ENSP00000202816/1-851 KALSQKKIKK KKTQTKKEID SKNLVE-KKK ETKKANHKGS ENKTDLDNSI ENSBTAP00000009384/1-856 KTLSQKKMKK KKPQTINEVE SKNLVEDKKK KNKKIHQKDS GN-NDLDNSE ENSTTRP00000005053/1-853 KTLNQKKLKK KKPQTKNEKE SKNLVEEKKK EAKKINQKDS GNKNDLDNSE bmy_10736T0/1-663 KALKQKKMKK KKPQNKNEKE SKNLAEEKKK ETKKINQKDS GKKNDLDNSG BACU000654/1-858 KAMNQKKMKK KKPQTKNEKE SKNLVEEKKK ETKKINQKDS GKKNDLGNSG 201 250 ENSP00000202816/1-851 GIKKMKTSCK FKIDSNISPK KDSKEFTQKN KKEKKNIVQH TTDSSLEEKQ ENSBTAP00000009384/1-856 RIQKMKTSCK SKKIDLVSLE KDSKEFTQKS TKGEKNTVQQ STDSFPKEQL ENSTTRP00000005053/1-853 RIQKMKTSCK SKKIESTSPK SDSKEFIQKS TKGKKTVVQH NTDLFPKGKL bmy_10736T0/1-663 RIQKMKTSCK SKKIESISPK NDSKEFIQKS TKGKKTIVQH NTDLFPKGKL BACU000654/1-858 RIQKMKTSCK SKKIESISPK NDSKEFMQKS TKGKKTIVQH NIDLFPKGKL 251 300 ENSP00000202816/1-851 RTLDSGTSEI VKSPRIECSK T-RREMQSVV QLIMTRDSDG YENSTDGEMC ENSBTAP00000009384/1-856 RMVASGTSEI VQSPKVKYSE TRRRKMQSVV PFIMARDSDG HEDSTGGKRF ENSTTRP00000005053/1-853 RTVDSGTSEI AQSPKVKYSE T-GREMQSVV PFIMARDSDG HENSASGKM- bmy_10736T0/1-663 RTVDSGTSEI AQSPKVKYSE T-GREMQSVV PFIMARDSDG HENSASGKMF BACU000654/1-858 RTVDSGTSEI AQSPKVKYSE T-GREIQSVV PFIMARDSDG HENSASSKMF 301 350 ENSP00000202816/1-851 DKDALEEDSE SVSEIGSDEE SENEITSVGR ASG----DDD GSEDDEEEDE ENSBTAP00000009384/1-856 DKDALEEDSE SASETGSDEE SEDEITGICR AAAADLHDEE DDDDDDDDEG ENSTTRP00000005053/1-853 DKEALEEDSE SASEIGGDEE SEDEFTGICR ASD---DDDD DDDDDGGNEN bmy_10736T0/1-663 DKEALEE--E SASEMGGDEE SEDEITGICR AVAAGLHDDD GDDDDGGNEN BACU000654/1-858 DKEALEEDSE SASEIGGDEE SEDEITGICR AVAADLHDDG DDDDDGGNEN 351 400 ENSP00000202816/1-851 DEEEDEDEDS EDDDKSDSGP DLARGKGNIE TSSEDEDDTA DLFPEESGFE ENSBTAP00000009384/1-856 I-GNDEEDDS EDDDESDSGP DLARGKGNIE TSSEDEDDMA DLLPEESGFE ENSTTRP00000005053/1-853 D-EEDEDEDS EDDDESDSGP DLARGKGNIE SSSEDEEDMA YLLPEESGFE bmy_10736T0/1-663 DEEEDEDEDS EDDDESDSGP DLARGKGNIE TSSEDEEDMA YLLPEESGFE BACU000654/1-858 DEEEDEDKDS EDDDESDSGP DLARGKGNIE TSSEDEEDMA YLLPEESGFE 401 450 ENSP00000202816/1-851 HAWRELDKDA PRADEITRRL AVCNMDWDRL KAKDLLALFN SFKPKGGVIF ENSBTAP00000009384/1-856 HAWRELDKDA PRADEITCRL AVCNMDWDRL KAKDLLALFN SFKPKGGVIF ENSTTRP00000005053/1-853 HAWRELDKDA PRADEITHRL AVCNMDWDRL KAKDLLALFN SFKPKGGVIF bmy_10736T0/1-663 HAWRELDKDA PRADEITHRL AVCNMDWDRL KAKDLLALFN SFKPKGGVIF BACU000654/1-858 HAWRELDKDA PRADEITHRL AVCNMDWDRL KAKDLLALFN SFKPKGGVIF 451 500 ENSP00000202816/1-851 SVKIYPSEFG KERMKEEQVQ GPVELLSIPE DAPEKDWTSR EKLRDYQFKR ENSBTAP00000009384/1-856 SVKIYPSEFG KERMKEEHVQ GPVELLSIPE DAPEKDWASR EKLRDYQFKR ENSTTRP00000005053/1-853 SVKIYASEFG KERMKEEQVQ GPVELLSIPE DAPEKDWTCR EKLRDYQFKR bmy_10736T0/1-663 SVKIYPSEFG KERMKEEQVQ GPVE------ -------TCR EKLRDYQFKR BACU000654/1-858 SVKIYPSEFG KERMKEEQVQ GPVELLSIPE DAPEKDWTCR EKLRDYQFKR 501 550 ENSP00000202816/1-851 LKYYYAVVDC DSPETASKIY EDCDGLEFES SCSFIDLRFI PDDITFDDEP ENSBTAP00000009384/1-856 LKYYYAVVDC DSPETAAKIY EDCDGLEFES SCSFVDLRFI PDDITFDDEP ENSTTRP00000005053/1-853 LKYYYAVVDC DSLETATKIY EDCDGLEFES SCSFIDLRFI PDDITFDDEP bmy_10736T0/1-663 LKYYYAVVDC DSLETAAKIY EDCDGLEFES SCSFIDLRFI PDDITFDDEP BACU000654/1-858 LKYYYAVVDC DSLETAAKIY EDCDGLEFES SCSFIDLRFI PDDITFDDEP 551 600 ENSP00000202816/1-851 KDVASEVNLT AYKPKYFTSA AMGTSTVEIT WDETDHERIT MLNRKFKKEE ENSBTAP00000009384/1-856 KDVASEVDLT AYKPKYFTSA AMGTSTVEIT WDETDHERIT TLNRRFKKEE ENSTTRP00000005053/1-853 KDVASEVDLT AYKPRYFTSA AMGTSTVEIT WDETDHERIT TLNRKFKKEE bmy_10736T0/1-663 KDVASEVDLT AYKPRYFTSA AMGTSTVEIT WDETDHERIT TLNRKFKKEE BACU000654/1-858 KDVASEVDLA AYKPRYFTSA AMGTSTVEIT WDETDHERIT TLNRKFKKEE 601 650 ENSP00000202816/1-851 LLDMDFQAYL ASSSEDEEEI EEELQGDDGV NVEEDGKTKK SQKDDEEQIA ENSBTAP00000009384/1-856 LLDMDFQAYL ASSSEDEEEM EEA-QGDDGV SVEEDGKTKK SQKDDEEQIA ENSTTRP00000005053/1-853 LLDMDFQAYL ASSSEDEEEI EEELQGDDGV SVEEGGKTKR SQKDDEEQIA bmy_10736T0/1-663 LLDMDFQAYL ASSSEDEEEI EEELQGDDGV SVEEDGKTKR SQKDDEDQIA BACU000654/1-858 LLDMDFQAYL ASSSEDEEEI EEELQGDDGV SVEEDGKTKR SQKDDEEQIA 651 700 ENSP00000202816/1-851 KYRQLLQVIQ EKEKKGKEND MEMEIKWVPG LKESAEEMVK NKLEGKDKLT ENSBTAP00000009384/1-856 KYRQLLQVIQ DKEKKSKEND MEMEIKWVPG LKESAEEMVK NKLEGKDKLT ENSTTRP00000005053/1-853 KYRQLLQVIQ EKEKKGKEND MEMEIKWVPG LKESAEEMVK NKLEGKDKLT bmy_10736T0/1-663 KYRQLLHVIQ EKEKKGKEND MEMEIKWVP- ---------- ---------- BACU000654/1-858 KYRQLLQVIQ EKEKKGKEND MEMEIKWVPG LKESAEEMVR NKLEGKDKLT 701 750 ENSP00000202816/1-851 PWEQFLEKKK EKKRLKRKQK ALAEEASEEE LPSDVDLNDP YFAEEVKQIG ENSBTAP00000009384/1-856 PWEQFLEKKK EKKRLKKKQK ALAEEASEDD VPSDVDMNDP YFAEEAKKIG ENSTTRP00000005053/1-853 PWEQFLEKKK EKKRLKKKQK ALAEEASEDE VPSDVDMNDP YFAEEAKKIG bmy_10736T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU000654/1-858 PWEQFLEKKK EKKRLKKKQK ALAEEASEDE VPSDVDMNDP YFAEEAKKIG 751 800 ENSP00000202816/1-851 I--NKKSVKS AKDGTSPEEE IEIERQKAEM ALLMMDEDED SKKHFNYNKI ENSBTAP00000009384/1-856 IKEKKKSTKS AKDDISPEEE AEIERQKAEM ALLVMDEEEE SKKHFNYNKI ENSTTRP00000005053/1-853 IKEKKKSTKS AKDGTSPEEQ AELERQKAEM ALLVMDEEEE SKKHFNYNKI bmy_10736T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU000654/1-858 IKEKKKSTKS AKDGTSPEEQ AELERQKAEM ALLVMDEEEE SKKHFNYNKI 801 850 ENSP00000202816/1-851 VEHQNLSKKK KKQLMKKKEL IEDDFEVNVN DARFQAMYTS HLFNLDPSDP ENSBTAP00000009384/1-856 VEHQNLSKKK KKQLMKKKEL LEDDFEVNVK DARFQAMYTS HLFNLDPSDP ENSTTRP00000005053/1-853 VEHQNLSKKK KKQLMKKKEL LEDDFEXXXX XXXXXXMYTS HLFNLDPSDP bmy_10736T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU000654/1-858 VEHQNLSKKK KKQLMKKKEL LEDDFEVNVK DARFQAMYTS HLFNLDPSDP 851 900 ENSP00000202816/1-851 NFKKTKAMEK ILEEKARQRE RKEQELTQAI KKKESEIEKE SQRKSIDPAL ENSBTAP00000009384/1-856 NFKKTKAMER ILEEKARQRE QKEQGLTQAT SEKEGEVQKE SHKRSIDPAL ENSTTRP00000005053/1-853 NFKKTKAMEK ILEEKARQRE QKEQELTQAI KKKESEIQKE SHKRSIDPAL bmy_10736T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU000654/1-858 NFKKTKAMEK ILEEKARQRE QKEQELTQAI KKKESEIQKE SHKRSIDPAL 901 950 ENSP00000202816/1-851 SMLIKSIKTK TEQFQARKKQ KVK ENSBTAP00000009384/1-856 SMLIKSVKNK TEQFQARKKQ KVK ENSTTRP00000005053/1-853 SMLIKSVKNK TEQFQARKKQ KVK bmy_10736T0/1-663 ---------- ---------- --- BACU000654/1-858 SMLIKSVKNK TEQFQARKKQ KVK