KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:21 2014 Check: 00 .. Name: bmy_13292T0/1-307 Len: 529 Check: 378 Weight: 1.00 Name: BACU014658/1-466 Len: 529 Check: 2397 Weight: 1.00 Name: ENSBTAP00000009385/1-521 Len: 529 Check: 1167 Weight: 1.00 Name: ENSP00000282538/1-521 Len: 529 Check: 72 Weight: 1.00 Name: ENSTTRP00000004147/1-337 Len: 529 Check: 9057 Weight: 1.00 // 1 50 bmy_13292T0/1-307 MSCHPDRERP LDGDIDPQEM VPSRKNTVFV DGVILNGPTT DARAGEKFVE BACU014658/1-466 ---------- ---------M VSSRKNTVFV DGVILNGPTT DARAGEKFVE ENSBTAP00000009385/1-521 MSLLPDRERA PDGDISPQEM VPSRKNVVLV DGVILNGPAT DVKAGEKFVE ENSP00000282538/1-521 MSSDSDRQCP VDGDIDQQEM IPSKKNAVLV DGVVLNGPTT DAKAGEKFVE ENSTTRP00000004147/1-337 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_13292T0/1-307 EACRLIMEEV VLKATDINEK TVYFSVSDGF ---------- ---------- BACU014658/1-466 EACRLIMEEV VLKATDINEK VCEWRPPEQL KQLLDLELRD TGEPQQRLLE ENSBTAP00000009385/1-521 DACRLIMEEV VLKATDINEK VCEWRPPEEL KRLLDLELRD AGEPHHRLLQ ENSP00000282538/1-521 EACRLIMEEV VLKATDVNEK VCEWRPPEQL KQLLDLEMRD SGEPPHKLLE ENSTTRP00000004147/1-337 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_13292T0/1-307 ----ISKDST HTSTATWFNK TLCAFLGLQR DGLTLAIEVK CFLYLSSYTY BACU014658/1-466 LCQDVIRYSV KTNHPRFFNQ L---YAGLDY YSLVARFMTE A-LNPSVYTY ENSBTAP00000009385/1-521 RCQDVIRYSV KTNHPRFFNQ L---YAGLDY YSLVARFMTE A-LNPSVYTY ENSP00000282538/1-521 LCRDVIHYSV KTNHPRFFNQ L---YAGLDY YSLVARFMTE A-LNPSVYTY ENSTTRP00000004147/1-337 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_13292T0/1-307 EVSPVFLLVE EAVLKKMIEF IGWKEGDGIF NPGGSVSNMY AMNLARYKYC BACU014658/1-466 EVSPVFLLVE EAVLKKMIEF IGWKEGDGIF NPGGSVSNMY AMNLARYKYC ENSBTAP00000009385/1-521 EVSPVFLLVE EAVLKKMIEF IGWKEGDGIF NPGGSVSNMY AMNLARYKYC ENSP00000282538/1-521 EVSPVFLLVE EAVLKKMIEF IGWKEGDGIF NPGGSVSNMY AMNLARYKYC ENSTTRP00000004147/1-337 ---------- ---------- ---------- --------MY AMNLARYKYC 201 250 bmy_13292T0/1-307 PDIKEKGLSG LPRLILFTSA EALAHGPLVI FPDCFIRWPY FSSFYAAPDE BACU014658/1-466 PDIKEKGLSG LPRLILFTSA ECHYS---MK KAASFLGIGT ENACFVETDG ENSBTAP00000009385/1-521 PDIKEKGLSG LPRLILFTSA ECHYS---MK KSASFLGIGT ENVCFVETDG ENSP00000282538/1-521 PDIKEKGLSG SPRLILFTSA ECHYS---MK KAASFLGIGT ENVCFVETDG ENSTTRP00000004147/1-337 PDIKEKGLSG LPRLIFFTSA ECHYS---MK KAASFLGIGT ENVCFVETDG 251 300 bmy_13292T0/1-307 PGGKMIPEEL ERQVWQAKKE GAAPFLVCAT SGTTVLGAFD PLDEIADICE BACU014658/1-466 R-GKMIPEEL ERQVWQAKKE GAAPFLVCAT SGTTVLGAFD PLDEIADICE ENSBTAP00000009385/1-521 R-GKMIPEEL EKRVQKAKKE GAAPFLVCAT SGTTVLGAFD PLDEIADICE ENSP00000282538/1-521 R-GKMIPEEL EKQVWQARKE GAAPFLVCAT SGTTVLGAFD PLDEIADICE ENSTTRP00000004147/1-337 R-GKMIPEEL ERQVWQAKKE GAAPFLVCAT SGTTVLGAFD PLDEIADVCE 301 350 bmy_13292T0/1-307 RHGLWLHVDA SWGGSALMSR KHRKLLHGIH R--------- ---------- BACU014658/1-466 RHGLWLHVDA SWGGSALMSR KYRKLLHGIH RADSVAWNPH KMLMAGIQCC ENSBTAP00000009385/1-521 RHGLWLHVDA SWGGSALMSR KHRRLLQGIH RADSVAWNPH KMLMAGIQCC ENSP00000282538/1-521 RHSLWLHVDA SWGGSALMSR KHRKLLHGIH RADSVAWNPH KMLMAGIQCC ENSTTRP00000004147/1-337 RHGLWLHVDA SWGGSALMSR KHRKLLHGIH RADSVAWNPH KMLMAGIQCC 351 400 bmy_13292T0/1-307 ---------- ---------- ---------- ---------- ---------- BACU014658/1-466 AFLVKDKSDL LKKCYSAKAS YLFQQDKFYD VSYDTGDKSI QCSRRPDAFK ENSBTAP00000009385/1-521 AFLVKDKSDL LKRCYSANAS YLFQQDKFYD VSYDTGDKSI QCSRRPDAFK ENSP00000282538/1-521 ALLVKDKSDL LKKCYSAKAS YLFQQDKFYD VSYDTGDKSI QCSRRPDAFK ENSTTRP00000004147/1-337 AFLVKDKSDL LKKCYSAKAS YLFQQDKFYD VSYDTGDKSI QCSRRPDAFK 401 450 bmy_13292T0/1-307 ---------- ---------- ---------- ---------- ---------- BACU014658/1-466 FWMTWKALGT LGLEEKVNRA LALSRYLVEE IKKREGFKLL MEPEYANVCF ENSBTAP00000009385/1-521 FWLAWKALGT LGLEERVNRA LALSRYLVEE IKKREGFKLL MEPEYANICF ENSP00000282538/1-521 FWMTWKALGT LGLEERVNRA LALSRYLVDE IKKREGFKLL MEPEYANICF ENSTTRP00000004147/1-337 FWMTWKALGT LGLEEKVNRA LALSRYLVEE IKKREGFKLL MEPEYANVCF 451 500 bmy_13292T0/1-307 ---------- ---------- ---------- ---------- ---------- BACU014658/1-466 WYIPPSLREM EEGPEFWAKL HLVSDK---- ---------- ------DIAF ENSBTAP00000009385/1-521 WYIPPSLRQM EEGPEFWAKL HLVAPAIKER MMKKGSLMLG YQPHQGKVNF ENSP00000282538/1-521 WYIPPSLREM EEGPEFWAKL NLVAPAIKER MMKKGSLMLG YQPHRGKVNF ENSTTRP00000004147/1-337 WYIPPSLREM EEGPEFWAKL HLVAPAIKER MMKKGSLMLG YQPHRGKVNF 501 550 bmy_13292T0/1-307 ---------- ---------- --------- BACU014658/1-466 FP-------- --------LD GIDSMPIVY ENSBTAP00000009385/1-521 FRQVVISPQV SREDMDFLLD EIDLLGKDM ENSP00000282538/1-521 FRQVVISPQV SREDMDFLLD EIDLLGKDM ENSTTRP00000004147/1-337 FRQVLISPQV RREDMDFLLD EIDLLGRDM