KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:22 2014 Check: 00 .. Name: ENSBTAP00000009392/1-316 Len: 399 Check: 7256 Weight: 1.00 Name: ENSP00000408295/1-340 Len: 399 Check: 8623 Weight: 1.00 Name: bmy_09861T0/1-398 Len: 399 Check: 9486 Weight: 1.00 Name: BACU013593/1-123 Len: 399 Check: 4023 Weight: 1.00 Name: ENSTTRP00000000615/1-341 Len: 399 Check: 3656 Weight: 1.00 // 1 50 ENSBTAP00000009392/1-316 ---------- ---------- ---------- ---------- --METSAHK- ENSP00000408295/1-340 ---------- ---------- ---------- ---------- --METSALKQ bmy_09861T0/1-398 RELRLRANCK SVGFGVRSWL VAVQAPGGGD KPTGPSHLRH PVMETSAHKQ BACU013593/1-123 ---------- ---------- ---------- ---------- --METSAHKQ ENSTTRP00000000615/1-341 ---------- ---------- ---------- ---------- --METSAHKQ 51 100 ENSBTAP00000009392/1-316 -QQQPEAAKI RNLPWVEKYR PQTLDDLISH QDILSTIQKF ISEDRLPHLL ENSP00000408295/1-340 -QEQPAATKI RNLPWVEKYR PQTLNDLISH QDILSTIQKF INEDRLPHLL bmy_09861T0/1-398 QQQQPAAGKI RNLPWVEKYR PQTLDDLISH QDILSTIQKF ISQDRLPHLL BACU013593/1-123 QQQQPEAGKI RNLPW----- ---------- ---------- ---------- ENSTTRP00000000615/1-341 QQQQPEGGKI RNLPWVEKYR PQTLDDLISH QDILSTIQKF ISEDRLPHLL 101 150 ENSBTAP00000009392/1-316 LYGPPGTGKT STILACAKQL YKDKEFGSMV LELNASDDRG IDIVRGPILS ENSP00000408295/1-340 LYGPPGTGKT STILACAKQL YKDKEFGSMV LELNASDDRG IDIIRGPILS bmy_09861T0/1-398 LYGPPGTGKT STILACAKQL YKDKEFGSMV LELNASDDRG IDIVRGPILS BACU013593/1-123 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000615/1-341 LYGPPGTGKT STILACAKQL YKDKEFGSMV LELNASDDRG IDIVRGPILS 151 200 ENSBTAP00000009392/1-316 FASTRTIFKK GFKLVILDEA DAMTQDAQNA LRRVIEKFTE NTRFCLICNY ENSP00000408295/1-340 FASTRTIFKK GFKLVILDEA DAMTQDAQNA LRRVIEKFTE NTRFCLICNY bmy_09861T0/1-398 FASTRTIFKK GFKLVILDEA DAMTQDAQNA LRRVIEKFTE NTRFCLICNY BACU013593/1-123 ---------K GFKLVILDEA DAMTQDAQNA LR-------- ---------- ENSTTRP00000000615/1-341 FASTRTIFKK GFKLVILDEA DAMTQDAQNA LRRVIEKFTE NTRFCLICNY 201 250 ENSBTAP00000009392/1-316 LSKIIPALQS RCTRFRFGPL TPELMVPRLE HVVEEEKVDI SEDGMKALIT ENSP00000408295/1-340 LSKIIPALQS RCTRFRFGPL TPELMVPRLE HVVEEEKVDI SEDGMKALVT bmy_09861T0/1-398 LSKIIPALQS RCTRFRFGPL TPELMVPRLE HVAAEEKVDI SEDGMKALVT BACU013593/1-123 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000615/1-341 LSKIIPALQS RCTRFRFGPL TPELMVPRLE HVAEEEQVDI SEDGMKALVT 251 300 ENSBTAP00000009392/1-316 LSSGDMRRAL NILQSTNMAF GKVTEETVYT CTGHPLKSDI ANILDWMLNQ ENSP00000408295/1-340 LSSGDMRRAL NILQSTNMAF GKVTEETVYT CTGHPLKSDI ANILDWMLNQ bmy_09861T0/1-398 LSSGDMRRAL NILQSTNMAF GKVTEETVYT CTGHPLKSDI ANILDWMLNQ BACU013593/1-123 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000615/1-341 LSSGDMRRAL NILQSTNMAF GKVTEETVYT CTGHPLKSDI ANILDWMLNQ 301 350 ENSBTAP00000009392/1-316 DFTTAYRNIM ELKTLKGLAL HDILTEIHLF VHR------- ---------- ENSP00000408295/1-340 DFTTAYRNIT ELKTLKGLAL HDILTEIHLF VHR------- --------VD bmy_09861T0/1-398 DFTTAYRNIM ELKTLKGLAL HDILTEIHLF VHRVGNDRPH SFDFVFPPVD BACU013593/1-123 ------RGIM ELKTLKGLAL HDILTEIHLF VHR------- --------VD ENSTTRP00000000615/1-341 DFTTAYRNIM ELKTLKGLAL HDILTEIHLF VHR------- --------VD 351 400 ENSBTAP00000009392/1-316 --GNSCSSPV QKLCIKQHSL RLG------- ---------- ---VIGEGT ENSP00000408295/1-340 FPSSVRIHLL TKMADIEYRL SVGTNEKIQL SSLIAAFQVT RDLIVAEA- bmy_09861T0/1-398 FPSSVRIHLL TKMADIEYRL SVGTNEKIQL SSLIAAFQVT RDLIVTEA- BACU013593/1-123 FPSSVRIHLL TKMADIEYRL SVGTNEKIQL SSLIAAFQVT RDLIVTEA- ENSTTRP00000000615/1-341 FPSSVRIHLL TKMADIEYRL SVGTNEKIQL SSLIAAFQVT RDLIVTEA-