KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:22 2014 Check: 00 .. Name: ENSP00000462717/1-386 Len: 417 Check: 7149 Weight: 1.00 Name: ENSBTAP00000009405/1-381 Len: 417 Check: 8091 Weight: 1.00 Name: BACU006269/1-370 Len: 417 Check: 1489 Weight: 1.00 Name: bmy_17154T0/1-392 Len: 417 Check: 1179 Weight: 1.00 Name: ENSTTRP00000016265/1-312 Len: 417 Check: 8496 Weight: 1.00 // 1 50 ENSP00000462717/1-386 MTSLFRRSSS --GSGGGGTA GARGGGGGTA APQELNNSRP ARQVRRLEFN ENSBTAP00000009405/1-381 MTSLFRRS-- ---SGGGGAA GARGAGAGAA ASQELNNSRP ARQVRRLEFN BACU006269/1-370 ---------- --PEAAERAA TAQGPGGRGS APAELNNSRP ARQVRRLEFN bmy_17154T0/1-392 MTSLFRRSSG GGGGGGGGSA AARGAGGSAA ASQELNNSRP ARQVRRLEFN ENSTTRP00000016265/1-312 MTSLFRRS-- ---GGGGGSA AARGAGGSAA ASQELNNSRP ARQVRRLEFN 51 100 ENSP00000462717/1-386 QAMDDFKTMF PNMDYDIIEC VLRANSGAVD ATIDQLLQMN LEGGGSSGGV ENSBTAP00000009405/1-381 QAMDDFTTMF PNMDYDIIEC VLRANSGAVD ATIDQLLQMN LEAGG--GGV BACU006269/1-370 QAMDDFKTMF PNMDYDIIEC VLRANSGAVD ATIDQLLQMN LEAGG--GSV bmy_17154T0/1-392 QAMDDFKTMF PNMDYDIIEC VLRANSGAVD ATIDQLLQMN LEAGG--GSV ENSTTRP00000016265/1-312 QAMDDFKTMF PNMDYDIIEC VLRANSGAVD ATIDQLLQMN LEAGG--GSV 101 150 ENSP00000462717/1-386 YEDSSDSE-- -DSIPPEILE RTLEPDSSDE EPPPVYSPPA YHMHVFDRPY ENSBTAP00000009405/1-381 YEDSSDSE-- -DSIPPEVLE RTLEPDSSDE EPPPVYSPPA YHMHVLDRPY BACU006269/1-370 YEDSSDSE-- -DSIPPEILE RTLEPDSSDE EPPPVYSPPA YHMHMFDRPY bmy_17154T0/1-392 YEDSSDSE-- -DSIPPE--- ---------- -PPPVYSPPA YHMHMFDRPY ENSTTRP00000016265/1-312 XXXXXXXXXX XXXXXXXILE RTLEPDSSDE EPPPVYSPPA YHMHMFDRPY 151 200 ENSP00000462717/1-386 PLAPPTPPPR IDALGSGAPT SQRRYRNWNP PLLGNLPDDF LRILPQQLDS ENSBTAP00000009405/1-381 PLAPPTPPPR IDVLGSAPPS SQRRYRNWNP PLLGNLPEDF LRILPQQLDS BACU006269/1-370 PLAPPTPPPR IDVLGSAPPS GQRRYRNWNP PLLGNLPEDF LRILPQQLDS bmy_17154T0/1-392 PLAPPTPPPR IDVLGSAPPS GQRRYRNWNP PLLGNLPEDF LRILPQQLDS ENSTTRP00000016265/1-312 PLAPPTPPPR IDVLGSAPPS GQRRYRNWNP PLLGNLPEDF LRILPQQLDS 201 250 ENSP00000462717/1-386 IQGNAGGPKP GSGEGCPPAM AGPGPGDQES RWKQYLEDER IALFLQNEEF ENSBTAP00000009405/1-381 IQATSRGSKL ASTEGSLPPA AGPEPRDQES RWKQYLEDER IALFLQNEEF BACU006269/1-370 IQANSGGSKP ASTEGGLPLT AGPGPRDQEN RWKQYLEDER IALFLQNEEF bmy_17154T0/1-392 IQANSGGSKP ASTEGGRPLT AGPGPRDQEN RWKQYLEDER IALFLQNEEF ENSTTRP00000016265/1-312 IQATSGGSKP AITEGGRALT AGPGPRDQEN RWKQYLEDER IALFLQNEEF 251 300 ENSP00000462717/1-386 MKELQRNRDF LLALERDRLK YESQKSKSSS VAVGNDFGFS SPVPGTGDAN ENSBTAP00000009405/1-381 MKELQRNRDF LLALERDRLK YESQKSTSSS VAVGNDFDFP SPVPGNSDAS BACU006269/1-370 MKELQRNRDF LLALERDRLK YESQKSTSSS VAVGNDFDFP APVPGTSDNN bmy_17154T0/1-392 MKELQRNRDF LLALERDRLK YESQKSTSSS VAVGNDFDFP APVPGTSDNN ENSTTRP00000016265/1-312 MKELQRNRDF LLALERDRLK YESQKSTSSS VAVGNDFDFP APVPGTSDNN 301 350 ENSP00000462717/1-386 PAVSEDALFR DKLKHMGK-- ---STRRKLF ELARAFSE-K TKMRKSKRKH ENSBTAP00000009405/1-381 PAVSEDALFR DKLKHMGK-- ---STRRKLF ELARAFSE-K TKMRKSKRKH BACU006269/1-370 PAVSEDALFR DKLKHMGKYE DFRGRRQEVP KVEEALREGR SFLKSTSSSS bmy_17154T0/1-392 PAVSEDALFR DKLKHMGK-- ---STRRKLF ELARAFSE-K TKMRKSKRKH ENSTTRP00000016265/1-312 PAASEDALFR DKLKHMGK-- ---S------ ---------- ---------- 351 400 ENSP00000462717/1-386 LLKHQS---L GAAASTANLL DDVEGHACDE DFRGRRQEAP KVEEGLREGQ ENSBTAP00000009405/1-381 LLKHQS---L GAAASTANLL DDVEGHAYDE DFRGRRQEVP TVEEALKEGQ BACU006269/1-370 HLKNQ----- -ESSIFSIIT QFAEKCILLH PLPAGRPPPP PPD------- bmy_17154T0/1-392 LLKHQSRRLP GKATGGAQGG GSTKGRTVRD AAVSPRRRPS DPVEAAREQT ENSTTRP00000016265/1-312 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000462717/1-386 ---------- ------- ENSBTAP00000009405/1-381 ---------- ------- BACU006269/1-370 ---------- ------- bmy_17154T0/1-392 GPPLKSPAAA GWMVLEF ENSTTRP00000016265/1-312 ---------- -------